Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_04420 and AO356_04425 are separated by 121 nucleotides AO356_04425 and AO356_04430 are separated by 69 nucleotides
AO356_04420: AO356_04420 - ribonuclease D, at 1,000,764 to 1,001,897
_04420
AO356_04425: AO356_04425 - SAM-dependent methyltransferase, at 1,002,019 to 1,002,660
_04425
AO356_04430: AO356_04430 - hypothetical protein, at 1,002,730 to 1,004,379
_04430
Position (kb)
1002
1003 Strain fitness (log2 ratio)
-2
-1
0
1 at 1001.254 kb on - strand, within AO356_04420 at 1001.254 kb on - strand, within AO356_04420 at 1001.400 kb on + strand, within AO356_04420 at 1001.401 kb on - strand, within AO356_04420 at 1001.441 kb on - strand, within AO356_04420 at 1001.539 kb on + strand, within AO356_04420 at 1001.927 kb on + strand at 1001.927 kb on + strand at 1001.927 kb on + strand at 1001.927 kb on + strand at 1001.927 kb on + strand at 1001.927 kb on + strand at 1001.927 kb on + strand at 1001.927 kb on + strand at 1001.927 kb on + strand at 1001.927 kb on + strand at 1001.927 kb on + strand at 1001.927 kb on + strand at 1001.928 kb on - strand at 1001.928 kb on - strand at 1001.928 kb on - strand at 1001.928 kb on - strand at 1001.928 kb on - strand at 1001.928 kb on - strand at 1001.928 kb on - strand at 1001.928 kb on - strand at 1001.928 kb on - strand at 1001.928 kb on - strand at 1001.928 kb on - strand at 1001.928 kb on - strand at 1001.928 kb on - strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.930 kb on - strand at 1001.930 kb on - strand at 1001.930 kb on - strand at 1001.930 kb on - strand at 1001.930 kb on - strand at 1001.930 kb on - strand at 1001.930 kb on - strand at 1001.930 kb on - strand at 1001.930 kb on - strand at 1001.930 kb on - strand at 1001.930 kb on - strand at 1001.930 kb on - strand at 1001.931 kb on + strand at 1001.931 kb on + strand at 1001.931 kb on + strand at 1001.931 kb on + strand at 1001.931 kb on + strand at 1001.932 kb on - strand at 1001.959 kb on + strand at 1001.959 kb on + strand at 1001.959 kb on + strand at 1001.960 kb on - strand at 1001.960 kb on - strand at 1001.960 kb on - strand at 1001.960 kb on - strand at 1002.002 kb on + strand at 1002.002 kb on + strand at 1002.002 kb on + strand at 1002.002 kb on + strand at 1002.002 kb on + strand at 1002.002 kb on + strand at 1002.003 kb on - strand at 1002.003 kb on - strand at 1002.003 kb on - strand at 1002.003 kb on - strand at 1002.003 kb on - strand at 1002.008 kb on + strand at 1002.009 kb on - strand at 1002.009 kb on - strand at 1002.009 kb on - strand at 1002.009 kb on - strand at 1002.009 kb on - strand at 1002.030 kb on + strand at 1002.041 kb on + strand at 1002.041 kb on + strand at 1002.041 kb on + strand at 1002.041 kb on + strand at 1002.042 kb on - strand at 1002.042 kb on - strand at 1002.042 kb on - strand at 1002.291 kb on + strand, within AO356_04425 at 1002.291 kb on + strand, within AO356_04425 at 1002.291 kb on + strand, within AO356_04425 at 1002.291 kb on + strand, within AO356_04425 at 1002.292 kb on - strand, within AO356_04425 at 1002.292 kb on - strand, within AO356_04425 at 1002.292 kb on - strand, within AO356_04425 at 1002.292 kb on - strand, within AO356_04425 at 1002.451 kb on + strand, within AO356_04425 at 1002.660 kb on + strand at 1002.660 kb on + strand at 1002.660 kb on + strand at 1002.661 kb on - strand at 1002.661 kb on - strand at 1002.661 kb on - strand at 1002.661 kb on - strand at 1002.661 kb on - strand at 1002.661 kb on - strand at 1002.800 kb on + strand at 1002.800 kb on + strand at 1002.917 kb on + strand, within AO356_04430 at 1002.977 kb on + strand, within AO356_04430 at 1002.977 kb on + strand, within AO356_04430 at 1002.977 kb on + strand, within AO356_04430 at 1002.977 kb on + strand, within AO356_04430 at 1002.977 kb on + strand, within AO356_04430 at 1003.004 kb on + strand, within AO356_04430 at 1003.004 kb on + strand, within AO356_04430 at 1003.004 kb on + strand, within AO356_04430 at 1003.037 kb on + strand, within AO356_04430 at 1003.037 kb on + strand, within AO356_04430 at 1003.037 kb on + strand, within AO356_04430 at 1003.037 kb on + strand, within AO356_04430 at 1003.038 kb on - strand, within AO356_04430 at 1003.038 kb on - strand, within AO356_04430 at 1003.038 kb on - strand, within AO356_04430 at 1003.112 kb on + strand, within AO356_04430 at 1003.202 kb on + strand, within AO356_04430 at 1003.203 kb on - strand, within AO356_04430 at 1003.203 kb on - strand, within AO356_04430 at 1003.227 kb on - strand, within AO356_04430 at 1003.499 kb on + strand, within AO356_04430 at 1003.500 kb on - strand, within AO356_04430 at 1003.626 kb on + strand, within AO356_04430 at 1003.627 kb on - strand, within AO356_04430 at 1003.627 kb on - strand, within AO356_04430 at 1003.629 kb on - strand, within AO356_04430
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 1,001,254 - AO356_04420 0.43 -1.0 1,001,254 - AO356_04420 0.43 -0.1 1,001,400 + AO356_04420 0.56 -0.5 1,001,401 - AO356_04420 0.56 -2.1 1,001,441 - AO356_04420 0.60 -0.4 1,001,539 + AO356_04420 0.68 -0.1 1,001,927 + +0.6 1,001,927 + +0.2 1,001,927 + -1.2 1,001,927 + +0.9 1,001,927 + -0.8 1,001,927 + +1.1 1,001,927 + -0.3 1,001,927 + -0.1 1,001,927 + +1.0 1,001,927 + +0.3 1,001,927 + +0.2 1,001,927 + -0.9 1,001,928 - +0.3 1,001,928 - -0.3 1,001,928 - -0.3 1,001,928 - -0.2 1,001,928 - +0.2 1,001,928 - +0.3 1,001,928 - +0.4 1,001,928 - -0.1 1,001,928 - -0.5 1,001,928 - +0.6 1,001,928 - -0.3 1,001,928 - +0.1 1,001,928 - +0.1 1,001,929 + +0.2 1,001,929 + -0.0 1,001,929 + +0.3 1,001,929 + +0.6 1,001,929 + -1.3 1,001,929 + -0.8 1,001,929 + -0.2 1,001,929 + +0.4 1,001,929 + +0.8 1,001,929 + -0.1 1,001,929 + +1.0 1,001,929 + -0.5 1,001,929 + +0.7 1,001,929 + +0.0 1,001,929 + -0.3 1,001,930 - +0.0 1,001,930 - +0.1 1,001,930 - -1.5 1,001,930 - -0.1 1,001,930 - +0.4 1,001,930 - -0.8 1,001,930 - +0.5 1,001,930 - +0.5 1,001,930 - -0.7 1,001,930 - -0.3 1,001,930 - +0.2 1,001,930 - -0.8 1,001,931 + +0.2 1,001,931 + -0.0 1,001,931 + +1.0 1,001,931 + -0.3 1,001,931 + +0.3 1,001,932 - +0.7 1,001,959 + +0.6 1,001,959 + -0.2 1,001,959 + +0.5 1,001,960 - -0.9 1,001,960 - -0.8 1,001,960 - +0.5 1,001,960 - +0.3 1,002,002 + +0.3 1,002,002 + -0.2 1,002,002 + -0.3 1,002,002 + +0.3 1,002,002 + +0.3 1,002,002 + +0.8 1,002,003 - -1.5 1,002,003 - +0.0 1,002,003 - +0.6 1,002,003 - +0.2 1,002,003 - -0.8 1,002,008 + +0.2 1,002,009 - -0.2 1,002,009 - +0.6 1,002,009 - +1.2 1,002,009 - -0.5 1,002,009 - +0.1 1,002,030 + -0.3 1,002,041 + +0.2 1,002,041 + -0.5 1,002,041 + -0.1 1,002,041 + +0.1 1,002,042 - -0.5 1,002,042 - +0.2 1,002,042 - -0.4 1,002,291 + AO356_04425 0.42 -0.2 1,002,291 + AO356_04425 0.42 -0.5 1,002,291 + AO356_04425 0.42 +0.3 1,002,291 + AO356_04425 0.42 +0.4 1,002,292 - AO356_04425 0.43 +0.9 1,002,292 - AO356_04425 0.43 -1.0 1,002,292 - AO356_04425 0.43 -0.5 1,002,292 - AO356_04425 0.43 -0.3 1,002,451 + AO356_04425 0.67 +1.6 1,002,660 + +1.2 1,002,660 + -0.4 1,002,660 + +0.7 1,002,661 - -0.2 1,002,661 - +0.2 1,002,661 - +0.9 1,002,661 - +0.5 1,002,661 - +0.5 1,002,661 - -0.3 1,002,800 + +0.9 1,002,800 + -0.1 1,002,917 + AO356_04430 0.11 -0.7 1,002,977 + AO356_04430 0.15 -0.1 1,002,977 + AO356_04430 0.15 +0.6 1,002,977 + AO356_04430 0.15 +0.6 1,002,977 + AO356_04430 0.15 +0.6 1,002,977 + AO356_04430 0.15 -0.3 1,003,004 + AO356_04430 0.17 -1.1 1,003,004 + AO356_04430 0.17 +0.3 1,003,004 + AO356_04430 0.17 -0.2 1,003,037 + AO356_04430 0.19 +0.9 1,003,037 + AO356_04430 0.19 +0.3 1,003,037 + AO356_04430 0.19 +0.5 1,003,037 + AO356_04430 0.19 +0.1 1,003,038 - AO356_04430 0.19 +0.8 1,003,038 - AO356_04430 0.19 +0.3 1,003,038 - AO356_04430 0.19 -1.1 1,003,112 + AO356_04430 0.23 +0.4 1,003,202 + AO356_04430 0.29 -1.2 1,003,203 - AO356_04430 0.29 +0.1 1,003,203 - AO356_04430 0.29 +0.3 1,003,227 - AO356_04430 0.30 +0.9 1,003,499 + AO356_04430 0.47 -0.2 1,003,500 - AO356_04430 0.47 -0.4 1,003,626 + AO356_04430 0.54 -0.1 1,003,627 - AO356_04430 0.54 -1.1 1,003,627 - AO356_04430 0.54 -0.2 1,003,629 - AO356_04430 0.54 -0.1
Or see this region's nucleotide sequence