Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.3244.1

Experiment: MOKA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOKA
3,150,647	+		Xcc-8004.3242.1	0.58	+0.9
3,150,652	+		Xcc-8004.3242.1	0.59	-0.6
3,150,652	+		Xcc-8004.3242.1	0.59	-0.1
3,150,652	+		Xcc-8004.3242.1	0.59	-0.5
3,150,652	+		Xcc-8004.3242.1	0.59	+0.1
3,150,653	-		Xcc-8004.3242.1	0.59	+0.8
3,150,674	+		Xcc-8004.3242.1	0.64	+0.0
3,150,674	+		Xcc-8004.3242.1	0.64	+0.1
3,150,674	+		Xcc-8004.3242.1	0.64	+0.2
3,150,675	-		Xcc-8004.3242.1	0.64	+0.1
3,150,675	-		Xcc-8004.3242.1	0.64	+0.7
3,150,759	+		Xcc-8004.3242.1	0.82	+1.1
3,150,760	-		Xcc-8004.3242.1	0.82	-0.1
3,150,781	-		Xcc-8004.3242.1	0.86	+0.4
3,150,786	+		Xcc-8004.3242.1	0.88	-0.1
3,150,786	+		Xcc-8004.3242.1	0.88	-0.1
3,150,786	+		Xcc-8004.3242.1	0.88	+0.1
3,150,786	+		Xcc-8004.3242.1	0.88	-0.3
3,150,786	+		Xcc-8004.3242.1	0.88	-1.9
3,150,786	+		Xcc-8004.3242.1	0.88	-0.9
3,150,786	+		Xcc-8004.3242.1	0.88	-0.4
3,150,787	-		Xcc-8004.3242.1	0.88	-0.6
3,150,787	-		Xcc-8004.3242.1	0.88	+1.1
3,150,787	-		Xcc-8004.3242.1	0.88	-0.3
3,150,787	-		Xcc-8004.3242.1	0.88	-0.2
3,150,787	-		Xcc-8004.3242.1	0.88	+1.5
3,150,787	-		Xcc-8004.3242.1	0.88	-0.2
3,150,787	-		Xcc-8004.3242.1	0.88	-1.1
3,150,845	-				-0.0
3,151,021	+		Xcc-8004.3243.1	0.16	-0.1
3,151,021	+		Xcc-8004.3243.1	0.16	+2.1
3,151,022	-		Xcc-8004.3243.1	0.16	+0.6
3,151,022	-		Xcc-8004.3243.1	0.16	-1.6
3,151,037	+		Xcc-8004.3243.1	0.19	-1.1
3,151,037	+		Xcc-8004.3243.1	0.19	+0.3
3,151,038	-		Xcc-8004.3243.1	0.19	+0.2
3,151,038	-		Xcc-8004.3243.1	0.19	-0.6
3,151,038	-		Xcc-8004.3243.1	0.19	-0.2
3,151,066	+		Xcc-8004.3243.1	0.22	-0.1
3,151,067	-		Xcc-8004.3243.1	0.23	+0.4
3,151,067	-		Xcc-8004.3243.1	0.23	+0.8
3,151,067	-		Xcc-8004.3243.1	0.23	+0.3
3,151,067	-		Xcc-8004.3243.1	0.23	+0.5
3,151,116	+		Xcc-8004.3243.1	0.29	-0.7
3,151,117	-		Xcc-8004.3243.1	0.29	-1.3
3,151,117	-		Xcc-8004.3243.1	0.29	-0.4
3,151,117	-		Xcc-8004.3243.1	0.29	+0.8
3,151,117	-		Xcc-8004.3243.1	0.29	-0.3
3,151,117	-		Xcc-8004.3243.1	0.29	+0.5
3,151,117	-		Xcc-8004.3243.1	0.29	+0.5
3,151,117	-		Xcc-8004.3243.1	0.29	+0.3
3,151,127	+		Xcc-8004.3243.1	0.31	-1.7
3,151,128	-		Xcc-8004.3243.1	0.31	-2.3
3,151,128	-		Xcc-8004.3243.1	0.31	+0.5
3,151,284	+		Xcc-8004.3243.1	0.52	-0.8
3,151,284	+		Xcc-8004.3243.1	0.52	-0.5
3,151,285	-		Xcc-8004.3243.1	0.53	+1.1
3,151,308	+		Xcc-8004.3243.1	0.56	-0.1
3,151,362	+		Xcc-8004.3243.1	0.63	-0.7
3,151,363	-		Xcc-8004.3243.1	0.63	+0.5
3,151,363	-		Xcc-8004.3243.1	0.63	+0.1
3,151,509	+		Xcc-8004.3243.1	0.83	-0.9
3,151,509	+		Xcc-8004.3243.1	0.83	-1.7
3,151,509	+		Xcc-8004.3243.1	0.83	+0.3
3,151,509	+		Xcc-8004.3243.1	0.83	-0.1
3,151,509	+		Xcc-8004.3243.1	0.83	+0.1
3,151,509	+		Xcc-8004.3243.1	0.83	-1.3
3,151,509	+		Xcc-8004.3243.1	0.83	+0.7
3,151,509	+		Xcc-8004.3243.1	0.83	-0.3
3,151,509	+		Xcc-8004.3243.1	0.83	-0.2
3,151,509	+		Xcc-8004.3243.1	0.83	-0.2
3,151,509	+		Xcc-8004.3243.1	0.83	+1.1
3,151,509	+		Xcc-8004.3243.1	0.83	-0.3
3,151,509	+		Xcc-8004.3243.1	0.83	-0.3
3,151,509	+		Xcc-8004.3243.1	0.83	-1.0
3,151,510	-		Xcc-8004.3243.1	0.83	-0.9
3,151,510	-		Xcc-8004.3243.1	0.83	-1.8
3,151,510	-		Xcc-8004.3243.1	0.83	+0.4
3,151,510	-		Xcc-8004.3243.1	0.83	+0.5
3,151,510	-		Xcc-8004.3243.1	0.83	+0.3
3,151,559	+				-0.7
3,151,601	+				-0.5
3,151,601	+				-1.2
3,151,601	+				+0.3
3,151,601	+				+0.2
3,151,601	+				+0.6
3,151,601	+				+1.0
3,151,602	-				+0.3
3,151,602	-				-1.3
3,151,602	-				-1.1
3,151,602	-				+0.7
3,151,602	-				-0.2
3,151,602	-				-0.7
3,151,630	+				-0.1
3,151,630	+				+0.0
3,151,630	+				+0.8
3,151,631	-				-1.1
3,151,631	-				-0.8
3,151,631	-				+0.8
3,151,647	+				-0.3
3,151,647	+				+1.0
3,151,647	+				+0.4
3,151,647	+				-0.1
3,151,647	+				+0.4
3,151,647	+				-0.1
3,151,647	+				+0.9
3,151,647	+				+1.5
3,151,647	+				+0.5
3,151,647	+				+0.6
3,151,647	+				-0.4
3,151,648	-				-0.6
3,151,648	-				+0.7
3,151,648	-				-3.1
3,151,649	+				-0.4
3,151,649	+				+0.4
3,151,649	+				-0.2
3,151,650	-				+0.2
3,151,650	-				+0.5
3,151,650	-				-0.3
3,151,650	-				+0.5
3,151,650	-				+0.2
3,151,650	-				-0.5
3,151,850	+		Xcc-8004.3244.1	0.42	-1.6
3,151,851	-		Xcc-8004.3244.1	0.43	-0.5
3,151,851	-		Xcc-8004.3244.1	0.43	-0.7
3,151,986	+		Xcc-8004.3244.1	0.71	-0.3
3,151,987	-		Xcc-8004.3244.1	0.71	-0.7
3,152,094	+				-0.7
3,152,095	-				+0.1
3,152,181	+				-0.0
3,152,181	+				-0.1
3,152,182	-				-0.7
3,152,182	-				-2.6
3,152,213	+				-0.2
3,152,213	+				+0.4
3,152,351	+				+0.0
3,152,351	+				+0.7
3,152,352	-				-0.3
3,152,352	-				+0.5
3,152,435	+				-2.6
3,152,435	+				-0.4
3,152,436	-				+0.5
3,152,436	-				-1.1
3,152,465	+				+1.1
3,152,465	+				+0.9
3,152,466	-				-1.0
3,152,566	+				-0.5
3,152,566	+				-0.3
3,152,566	+				-1.1
3,152,566	+				+0.6
3,152,566	+				-0.2
3,152,567	-				-1.5
3,152,567	-				+0.8
3,152,567	-				-2.6
3,152,567	-				+0.5
3,152,690	-				-0.4
3,152,757	+		Xcc-8004.3246.1	0.70	-1.1
3,152,788	+		Xcc-8004.3246.1	0.79	-0.3
3,152,788	+		Xcc-8004.3246.1	0.79	-0.1
3,152,788	+		Xcc-8004.3246.1	0.79	+0.1
3,152,789	-		Xcc-8004.3246.1	0.80	+0.2
3,152,789	-		Xcc-8004.3246.1	0.80	-0.4
3,152,789	-		Xcc-8004.3246.1	0.80	+0.1
3,152,789	-		Xcc-8004.3246.1	0.80	-0.3
3,152,896	+				+0.2
3,152,903	+				-0.4
3,152,904	-				-2.2
3,152,904	-				-0.1
3,153,019	+				+0.7
3,153,020	-				+0.2
3,153,020	-				+0.8
3,153,103	+		Xcc-8004.3247.1	0.13	+1.0
3,153,103	+		Xcc-8004.3247.1	0.13	-0.5
3,153,104	-		Xcc-8004.3247.1	0.13	-0.9