Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS36280 and RR42_RS36285 are separated by 24 nucleotides RR42_RS36285 and RR42_RS36290 are separated by 34 nucleotides
RR42_RS36280: RR42_RS36280 - hypothetical protein, at 3,591,345 to 3,592,685
_RS36280
RR42_RS36285: RR42_RS36285 - hypothetical protein, at 3,592,710 to 3,594,041
_RS36285
RR42_RS36290: RR42_RS36290 - ABC transporter substrate-binding protein, at 3,594,076 to 3,595,032
_RS36290
Position (kb)
3592
3593
3594
3595 Strain fitness (log2 ratio)
-2
-1
0
1 at 3591.752 kb on - strand, within RR42_RS36280 at 3591.752 kb on - strand, within RR42_RS36280 at 3591.752 kb on - strand, within RR42_RS36280 at 3591.784 kb on + strand, within RR42_RS36280 at 3591.784 kb on + strand, within RR42_RS36280 at 3591.784 kb on + strand, within RR42_RS36280 at 3591.785 kb on - strand, within RR42_RS36280 at 3592.339 kb on + strand, within RR42_RS36280 at 3592.340 kb on - strand, within RR42_RS36280 at 3592.340 kb on - strand, within RR42_RS36280 at 3592.357 kb on + strand, within RR42_RS36280 at 3592.357 kb on + strand, within RR42_RS36280 at 3592.381 kb on + strand, within RR42_RS36280 at 3592.381 kb on + strand, within RR42_RS36280 at 3592.381 kb on + strand, within RR42_RS36280 at 3592.382 kb on - strand, within RR42_RS36280 at 3592.382 kb on - strand, within RR42_RS36280 at 3592.382 kb on - strand, within RR42_RS36280 at 3592.453 kb on + strand, within RR42_RS36280 at 3592.742 kb on - strand at 3592.943 kb on - strand, within RR42_RS36285 at 3592.943 kb on - strand, within RR42_RS36285 at 3593.075 kb on - strand, within RR42_RS36285 at 3593.149 kb on + strand, within RR42_RS36285 at 3593.149 kb on + strand, within RR42_RS36285 at 3593.150 kb on - strand, within RR42_RS36285 at 3593.170 kb on + strand, within RR42_RS36285 at 3593.234 kb on - strand, within RR42_RS36285 at 3593.689 kb on + strand, within RR42_RS36285 at 3593.768 kb on - strand, within RR42_RS36285 at 3593.768 kb on - strand, within RR42_RS36285 at 3593.768 kb on - strand, within RR42_RS36285 at 3593.929 kb on + strand at 3593.930 kb on - strand at 3593.984 kb on - strand at 3593.984 kb on - strand at 3594.077 kb on + strand at 3594.078 kb on - strand at 3594.494 kb on + strand, within RR42_RS36290 at 3594.581 kb on + strand, within RR42_RS36290 at 3594.582 kb on - strand, within RR42_RS36290 at 3594.582 kb on - strand, within RR42_RS36290 at 3594.969 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 3,591,752 - RR42_RS36280 0.30 -0.5 3,591,752 - RR42_RS36280 0.30 +1.0 3,591,752 - RR42_RS36280 0.30 +0.7 3,591,784 + RR42_RS36280 0.33 -0.0 3,591,784 + RR42_RS36280 0.33 +0.1 3,591,784 + RR42_RS36280 0.33 -1.2 3,591,785 - RR42_RS36280 0.33 -2.1 3,592,339 + RR42_RS36280 0.74 -0.9 3,592,340 - RR42_RS36280 0.74 +0.3 3,592,340 - RR42_RS36280 0.74 -0.1 3,592,357 + RR42_RS36280 0.75 -0.2 3,592,357 + RR42_RS36280 0.75 -0.5 3,592,381 + RR42_RS36280 0.77 +0.7 3,592,381 + RR42_RS36280 0.77 +0.8 3,592,381 + RR42_RS36280 0.77 +0.8 3,592,382 - RR42_RS36280 0.77 +0.3 3,592,382 - RR42_RS36280 0.77 +0.6 3,592,382 - RR42_RS36280 0.77 +0.3 3,592,453 + RR42_RS36280 0.83 +0.1 3,592,742 - -1.5 3,592,943 - RR42_RS36285 0.17 -0.4 3,592,943 - RR42_RS36285 0.17 +1.0 3,593,075 - RR42_RS36285 0.27 +0.6 3,593,149 + RR42_RS36285 0.33 +0.3 3,593,149 + RR42_RS36285 0.33 +0.3 3,593,150 - RR42_RS36285 0.33 +1.5 3,593,170 + RR42_RS36285 0.35 +1.4 3,593,234 - RR42_RS36285 0.39 +1.6 3,593,689 + RR42_RS36285 0.73 +0.0 3,593,768 - RR42_RS36285 0.79 +0.2 3,593,768 - RR42_RS36285 0.79 +1.2 3,593,768 - RR42_RS36285 0.79 +0.3 3,593,929 + -0.2 3,593,930 - -0.0 3,593,984 - -0.0 3,593,984 - +0.4 3,594,077 + +0.4 3,594,078 - +0.1 3,594,494 + RR42_RS36290 0.44 +0.2 3,594,581 + RR42_RS36290 0.53 +0.2 3,594,582 - RR42_RS36290 0.53 -0.2 3,594,582 - RR42_RS36290 0.53 -1.9 3,594,969 - -0.8
Or see this region's nucleotide sequence