Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS09665 and RR42_RS09670 are separated by 717 nucleotides
RR42_RS09665: RR42_RS09665 - hypothetical protein, at 2,050,327 to 2,052,003
_RS09665
RR42_RS09670: RR42_RS09670 - hypothetical protein, at 2,052,721 to 2,053,122
_RS09670
Position (kb)
2052
2053
2054 Strain fitness (log2 ratio)
-2
-1
0
1 at 2052.204 kb on - strand at 2052.383 kb on + strand at 2052.390 kb on - strand at 2052.456 kb on - strand at 2052.456 kb on - strand at 2052.513 kb on - strand at 2052.719 kb on + strand at 2052.722 kb on + strand at 2052.723 kb on - strand at 2052.792 kb on + strand, within RR42_RS09670 at 2052.793 kb on - strand, within RR42_RS09670 at 2052.793 kb on - strand, within RR42_RS09670 at 2052.793 kb on - strand, within RR42_RS09670 at 2052.793 kb on - strand, within RR42_RS09670 at 2052.861 kb on + strand, within RR42_RS09670 at 2052.862 kb on - strand, within RR42_RS09670 at 2052.923 kb on - strand, within RR42_RS09670 at 2052.966 kb on + strand, within RR42_RS09670 at 2052.973 kb on - strand, within RR42_RS09670 at 2053.101 kb on + strand at 2053.102 kb on - strand at 2053.103 kb on + strand at 2053.103 kb on + strand at 2053.103 kb on + strand at 2053.104 kb on - strand at 2053.104 kb on - strand at 2053.192 kb on + strand at 2053.192 kb on + strand at 2053.193 kb on - strand at 2053.193 kb on - strand at 2053.194 kb on + strand at 2053.243 kb on + strand at 2053.244 kb on - strand at 2053.274 kb on + strand at 2053.275 kb on - strand at 2053.325 kb on + strand at 2053.326 kb on - strand at 2053.384 kb on - strand at 2053.384 kb on - strand at 2053.481 kb on + strand at 2053.482 kb on - strand at 2053.482 kb on - strand at 2053.517 kb on - strand at 2053.565 kb on + strand at 2053.565 kb on + strand at 2053.566 kb on - strand at 2053.566 kb on - strand at 2053.676 kb on - strand at 2053.676 kb on - strand at 2053.756 kb on - strand at 2053.859 kb on + strand at 2053.860 kb on - strand at 2053.860 kb on - strand at 2053.912 kb on + strand at 2053.967 kb on + strand at 2053.972 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 2,052,204 - +0.8 2,052,383 + +0.1 2,052,390 - +1.2 2,052,456 - -0.3 2,052,456 - -1.6 2,052,513 - +0.2 2,052,719 + -0.4 2,052,722 + -1.3 2,052,723 - +0.8 2,052,792 + RR42_RS09670 0.18 -0.4 2,052,793 - RR42_RS09670 0.18 -0.5 2,052,793 - RR42_RS09670 0.18 -2.0 2,052,793 - RR42_RS09670 0.18 -1.3 2,052,793 - RR42_RS09670 0.18 -1.4 2,052,861 + RR42_RS09670 0.35 -1.2 2,052,862 - RR42_RS09670 0.35 -1.2 2,052,923 - RR42_RS09670 0.50 -1.2 2,052,966 + RR42_RS09670 0.61 -1.3 2,052,973 - RR42_RS09670 0.63 +0.2 2,053,101 + +1.2 2,053,102 - +0.5 2,053,103 + -0.6 2,053,103 + -0.9 2,053,103 + +0.2 2,053,104 - -0.4 2,053,104 - -0.2 2,053,192 + +0.0 2,053,192 + +0.8 2,053,193 - -1.3 2,053,193 - +0.8 2,053,194 + +0.2 2,053,243 + -1.2 2,053,244 - -0.9 2,053,274 + -0.2 2,053,275 - -0.6 2,053,325 + +0.4 2,053,326 - +0.2 2,053,384 - +0.9 2,053,384 - -0.4 2,053,481 + +0.2 2,053,482 - -0.5 2,053,482 - +0.3 2,053,517 - +0.4 2,053,565 + -0.2 2,053,565 + +0.3 2,053,566 - +1.2 2,053,566 - +0.4 2,053,676 - +0.8 2,053,676 - -0.4 2,053,756 - -0.7 2,053,859 + -0.2 2,053,860 - +0.4 2,053,860 - -0.0 2,053,912 + +0.0 2,053,967 + +0.2 2,053,972 - -0.1
Or see this region's nucleotide sequence