Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS03200 and RR42_RS03205 are separated by 437 nucleotides RR42_RS03205 and RR42_RS03210 are separated by 70 nucleotides RR42_RS03210 and RR42_RS03215 are separated by 162 nucleotides
RR42_RS03200: RR42_RS03200 - phosphoglycerate kinase, at 708,499 to 709,707
_RS03200
RR42_RS03205: RR42_RS03205 - hypothetical protein, at 710,145 to 710,576
_RS03205
RR42_RS03210: RR42_RS03210 - pyruvate kinase, at 710,647 to 712,083
_RS03210
RR42_RS03215: RR42_RS03215 - fructose-bisphosphate aldolase, at 712,246 to 713,310
_RS03215
Position (kb) 710
711
712
713 Strain fitness (log2 ratio) -1
0
1
2 at 709.938 kb on + strand at 709.938 kb on + strand at 710.778 kb on + strand at 711.056 kb on + strand, within RR42_RS03210 at 711.056 kb on + strand, within RR42_RS03210 at 711.056 kb on + strand, within RR42_RS03210 at 711.205 kb on + strand, within RR42_RS03210 at 711.205 kb on + strand, within RR42_RS03210 at 711.205 kb on + strand, within RR42_RS03210 at 711.205 kb on + strand, within RR42_RS03210 at 711.205 kb on + strand, within RR42_RS03210 at 711.205 kb on + strand, within RR42_RS03210 at 711.760 kb on + strand, within RR42_RS03210 at 711.773 kb on + strand, within RR42_RS03210 at 711.850 kb on + strand, within RR42_RS03210 at 711.850 kb on + strand, within RR42_RS03210 at 711.850 kb on + strand, within RR42_RS03210 at 711.968 kb on + strand at 711.968 kb on + strand at 711.968 kb on + strand at 711.968 kb on + strand at 711.968 kb on + strand at 711.968 kb on + strand at 711.968 kb on + strand at 711.968 kb on + strand at 712.005 kb on + strand at 712.053 kb on + strand at 712.084 kb on + strand at 712.084 kb on + strand at 712.138 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 709,938 + +0.6 709,938 + -0.8 710,778 + -0.2 711,056 + RR42_RS03210 0.28 +0.6 711,056 + RR42_RS03210 0.28 -1.2 711,056 + RR42_RS03210 0.28 +1.1 711,205 + RR42_RS03210 0.39 +0.8 711,205 + RR42_RS03210 0.39 +1.2 711,205 + RR42_RS03210 0.39 -0.6 711,205 + RR42_RS03210 0.39 +0.5 711,205 + RR42_RS03210 0.39 +0.8 711,205 + RR42_RS03210 0.39 +1.4 711,760 + RR42_RS03210 0.77 -0.8 711,773 + RR42_RS03210 0.78 +0.3 711,850 + RR42_RS03210 0.84 +1.1 711,850 + RR42_RS03210 0.84 -0.1 711,850 + RR42_RS03210 0.84 +0.3 711,968 + -0.5 711,968 + +0.6 711,968 + +0.6 711,968 + -0.9 711,968 + -0.3 711,968 + -0.9 711,968 + -0.0 711,968 + -0.8 712,005 + -0.1 712,053 + -0.7 712,084 + -1.4 712,084 + -0.2 712,138 + +2.4
Or see this region's nucleotide sequence