Experiment: Chloramphenicol 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0746 and Ga0059261_0747 are separated by 92 nucleotides Ga0059261_0747 and Ga0059261_0748 overlap by 1 nucleotides Ga0059261_0748 and Ga0059261_0749 are separated by 109 nucleotides Ga0059261_0749 and Ga0059261_0750 are separated by 93 nucleotides Ga0059261_0750 and Ga0059261_0751 are separated by 1 nucleotides
Ga0059261_0746: Ga0059261_0746 - Predicted permease, DMT superfamily, at 775,534 to 776,433
_0746
Ga0059261_0747: Ga0059261_0747 - Protein of unknown function (DUF2975), at 776,526 to 777,041
_0747
Ga0059261_0748: Ga0059261_0748 - Predicted transcriptional regulator, at 777,041 to 777,250
_0748
Ga0059261_0749: Ga0059261_0749 - Membrane transporters of cations and cationic drugs, at 777,360 to 777,680
_0749
Ga0059261_0750: Ga0059261_0750 - NADH:ubiquinone oxidoreductase subunit 3 (chain A), at 777,774 to 778,151
_0750
Ga0059261_0751: Ga0059261_0751 - DNA repair protein RadA, at 778,153 to 779,520
_0751
Position (kb) 777
778 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 776.444 kb on + strand at 776.444 kb on + strand at 776.511 kb on + strand at 776.745 kb on + strand, within Ga0059261_0747 at 776.745 kb on + strand, within Ga0059261_0747 at 776.745 kb on + strand, within Ga0059261_0747 at 776.745 kb on + strand, within Ga0059261_0747 at 776.745 kb on + strand, within Ga0059261_0747 at 776.745 kb on + strand, within Ga0059261_0747 at 776.745 kb on + strand, within Ga0059261_0747 at 776.745 kb on + strand, within Ga0059261_0747 at 776.745 kb on + strand, within Ga0059261_0747 at 777.233 kb on + strand at 777.270 kb on + strand at 777.270 kb on + strand at 777.270 kb on + strand at 777.343 kb on + strand at 777.343 kb on + strand at 777.344 kb on - strand at 777.344 kb on - strand at 777.344 kb on - strand at 777.372 kb on + strand at 777.372 kb on + strand at 777.372 kb on + strand at 777.372 kb on + strand at 777.373 kb on - strand at 777.373 kb on - strand at 777.534 kb on + strand, within Ga0059261_0749 at 777.535 kb on - strand, within Ga0059261_0749 at 777.535 kb on - strand, within Ga0059261_0749 at 777.535 kb on - strand, within Ga0059261_0749 at 777.535 kb on - strand, within Ga0059261_0749 at 777.535 kb on - strand, within Ga0059261_0749 at 777.640 kb on + strand at 777.640 kb on + strand, within Ga0059261_0749 at 777.640 kb on + strand, within Ga0059261_0749 at 777.641 kb on - strand, within Ga0059261_0749 at 777.641 kb on - strand, within Ga0059261_0749 at 777.641 kb on - strand, within Ga0059261_0749 at 777.829 kb on + strand, within Ga0059261_0750 at 777.830 kb on - strand, within Ga0059261_0750 at 777.918 kb on + strand, within Ga0059261_0750 at 777.919 kb on - strand, within Ga0059261_0750 at 777.919 kb on - strand, within Ga0059261_0750 at 777.919 kb on - strand, within Ga0059261_0750 at 777.975 kb on + strand, within Ga0059261_0750 at 777.975 kb on + strand, within Ga0059261_0750 at 777.976 kb on - strand, within Ga0059261_0750 at 777.976 kb on - strand, within Ga0059261_0750 at 778.116 kb on + strand at 778.116 kb on + strand at 778.116 kb on + strand at 778.116 kb on + strand at 778.116 kb on + strand at 778.116 kb on + strand at 778.116 kb on + strand at 778.117 kb on - strand at 778.117 kb on - strand at 778.117 kb on - strand at 778.117 kb on - strand at 778.149 kb on + strand at 778.149 kb on + strand at 778.167 kb on + strand at 778.167 kb on + strand at 778.167 kb on + strand at 778.167 kb on + strand at 778.167 kb on + strand at 778.167 kb on + strand at 778.167 kb on + strand at 778.167 kb on + strand at 778.167 kb on + strand at 778.168 kb on - strand at 778.168 kb on - strand at 778.168 kb on - strand at 778.168 kb on - strand at 778.168 kb on - strand at 778.451 kb on + strand, within Ga0059261_0751 at 778.452 kb on - strand, within Ga0059261_0751 at 778.495 kb on + strand at 778.577 kb on - strand, within Ga0059261_0751 at 778.630 kb on + strand, within Ga0059261_0751 at 778.631 kb on - strand, within Ga0059261_0751 at 778.631 kb on - strand, within Ga0059261_0751 at 778.631 kb on - strand, within Ga0059261_0751
Per-strain Table
Position Strand Gene LocusTag Fraction Chloramphenicol 0.0025 mg/ml remove 776,444 + -0.1 776,444 + +0.4 776,511 + -0.0 776,745 + Ga0059261_0747 0.42 +0.6 776,745 + Ga0059261_0747 0.42 -1.2 776,745 + Ga0059261_0747 0.42 -0.5 776,745 + Ga0059261_0747 0.42 -0.6 776,745 + Ga0059261_0747 0.42 +0.1 776,745 + Ga0059261_0747 0.42 -0.2 776,745 + Ga0059261_0747 0.42 -0.3 776,745 + Ga0059261_0747 0.42 -1.3 776,745 + Ga0059261_0747 0.42 +0.2 777,233 + -0.8 777,270 + -0.2 777,270 + +0.1 777,270 + +0.0 777,343 + -0.0 777,343 + +0.9 777,344 - +0.2 777,344 - +0.6 777,344 - -0.3 777,372 + +1.3 777,372 + -0.1 777,372 + +0.6 777,372 + +0.7 777,373 - +1.0 777,373 - +1.2 777,534 + Ga0059261_0749 0.54 +0.1 777,535 - Ga0059261_0749 0.55 -0.0 777,535 - Ga0059261_0749 0.55 +0.8 777,535 - Ga0059261_0749 0.55 +0.5 777,535 - Ga0059261_0749 0.55 -1.5 777,535 - Ga0059261_0749 0.55 +0.2 777,640 + -1.8 777,640 + Ga0059261_0749 0.87 -1.6 777,640 + Ga0059261_0749 0.87 +0.3 777,641 - Ga0059261_0749 0.88 +0.4 777,641 - Ga0059261_0749 0.88 +0.4 777,641 - Ga0059261_0749 0.88 +1.2 777,829 + Ga0059261_0750 0.15 +0.1 777,830 - Ga0059261_0750 0.15 -0.2 777,918 + Ga0059261_0750 0.38 -0.3 777,919 - Ga0059261_0750 0.38 -1.2 777,919 - Ga0059261_0750 0.38 -0.0 777,919 - Ga0059261_0750 0.38 -0.4 777,975 + Ga0059261_0750 0.53 +0.6 777,975 + Ga0059261_0750 0.53 -0.3 777,976 - Ga0059261_0750 0.53 -0.4 777,976 - Ga0059261_0750 0.53 -0.2 778,116 + +0.0 778,116 + -0.4 778,116 + -0.2 778,116 + +0.3 778,116 + -0.1 778,116 + +0.2 778,116 + -0.1 778,117 - +0.7 778,117 - -1.7 778,117 - -0.9 778,117 - +2.6 778,149 + -0.5 778,149 + +0.2 778,167 + +0.5 778,167 + -0.4 778,167 + +0.3 778,167 + -0.1 778,167 + +1.0 778,167 + +0.1 778,167 + -0.9 778,167 + -0.9 778,167 + +0.2 778,168 - +0.1 778,168 - -0.0 778,168 - +0.6 778,168 - +0.2 778,168 - -0.0 778,451 + Ga0059261_0751 0.22 +0.4 778,452 - Ga0059261_0751 0.22 +0.8 778,495 + -1.3 778,577 - Ga0059261_0751 0.31 +0.2 778,630 + Ga0059261_0751 0.35 -2.9 778,631 - Ga0059261_0751 0.35 -1.0 778,631 - Ga0059261_0751 0.35 -2.0 778,631 - Ga0059261_0751 0.35 -0.9
Or see this region's nucleotide sequence