Strain Fitness in Rahnella sp. WP5 around EX31_RS15035

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
21,653	-		EX31_RS15030	0.84	-1.0
21,742	+		EX31_RS15030	0.88	-1.0
21,885	+				+1.0
21,885	+				-1.5
21,885	+				+0.0
21,885	+				+1.8
21,885	+				+2.1
21,885	+				+0.9
21,886	-				-0.7
21,893	+				-1.0
21,893	+				+1.0
21,894	-				-1.3
21,976	+				+0.3
21,977	-				-2.5
21,983	+				-0.4
21,983	+				+0.9
21,983	+				+1.6
21,984	-				-0.5
22,036	+				+0.9
22,090	+				+0.6
22,090	+				+1.1
22,090	+				+0.3
22,090	+				-0.1
22,090	+				-0.9
22,090	+				-0.5
22,090	+				-1.9
22,090	+				-2.0
22,091	-				-1.0
22,091	-				-0.0
22,091	-				-1.4
22,091	-				-0.3
22,091	-				-2.6
22,117	-				-1.5
22,187	+				-1.0
22,187	+				-1.2
22,187	+				-1.0
22,188	-				+0.3
22,188	-				+0.2
22,188	-				-1.7
22,188	-				-1.0
22,188	-				-0.1
22,194	+				+0.7
22,195	-				-0.3
22,195	-				-1.1
22,195	-				-2.0
22,239	+		EX31_RS15035	0.12	-1.9
22,239	+		EX31_RS15035	0.12	-2.7
22,239	+		EX31_RS15035	0.12	-0.3
22,239	+		EX31_RS15035	0.12	-2.4
22,240	-		EX31_RS15035	0.12	+0.1
22,240	-		EX31_RS15035	0.12	+1.8
22,240	-		EX31_RS15035	0.12	+0.2
22,240	-		EX31_RS15035	0.12	-1.0
22,259	+		EX31_RS15035	0.14	+0.4
22,348	-		EX31_RS15035	0.20	-1.0
22,411	+		EX31_RS15035	0.24	-0.9
22,411	+		EX31_RS15035	0.24	-1.0
22,411	+		EX31_RS15035	0.24	-1.1
22,411	+		EX31_RS15035	0.24	-2.9
22,411	+		EX31_RS15035	0.24	-1.4
22,411	+		EX31_RS15035	0.24	-2.7
22,412	-		EX31_RS15035	0.24	+0.2
22,412	-		EX31_RS15035	0.24	-2.2
22,412	-		EX31_RS15035	0.24	-0.6
22,412	-		EX31_RS15035	0.24	-1.4
22,588	+		EX31_RS15035	0.36	+1.3
22,588	+		EX31_RS15035	0.36	-0.3
22,604	+		EX31_RS15035	0.37	-1.7
22,605	-		EX31_RS15035	0.37	-1.0
22,605	-		EX31_RS15035	0.37	-1.3
22,625	+		EX31_RS15035	0.38	-1.5
22,625	+		EX31_RS15035	0.38	-0.3
22,736	+		EX31_RS15035	0.46	-1.3
23,035	+		EX31_RS15035	0.66	-2.1
23,035	+		EX31_RS15035	0.66	+0.9
23,035	+		EX31_RS15035	0.66	-0.9
23,036	-		EX31_RS15035	0.66	+2.3
23,036	-		EX31_RS15035	0.66	-0.7
23,036	-		EX31_RS15035	0.66	-1.0
23,036	-		EX31_RS15035	0.66	-2.7
23,072	+		EX31_RS15035	0.68	-1.4
23,073	-		EX31_RS15035	0.68	-2.4
23,074	+		EX31_RS15035	0.68	-2.0
23,075	-		EX31_RS15035	0.68	+0.0
23,132	+		EX31_RS15035	0.72	+0.1
23,150	+		EX31_RS15035	0.73	+0.5
23,151	-		EX31_RS15035	0.73	-0.7
23,186	-		EX31_RS15035	0.76	+1.3
23,349	+		EX31_RS15035	0.87	-1.4
23,438	+				-2.4
23,438	+				-3.4
23,459	+				+0.4
23,524	+				-1.7
23,524	+				+1.0
23,524	+				+0.9
23,524	+				-0.4
23,524	+				+0.3
23,524	+				+0.0
23,525	-				+1.3
23,525	-				-1.2
23,525	-				+0.8
23,541	+				+0.4
23,541	+				-1.7
23,541	+				-1.7
23,541	+				+1.3
23,542	-				-0.3
23,542	-				-1.3
23,542	-				+1.0
23,546	+				+0.4
23,546	+				-0.3
23,546	+				-1.3
23,546	+				+0.1
23,546	+				-0.7
23,546	+				-0.8
23,546	+				-0.7
23,546	+				+0.3
23,546	+				+0.4
23,546	+				+0.5
23,546	+				-0.3
23,546	+				-1.3
23,546	+				-1.9
23,546	+				-0.3
23,546	+				-0.5
23,546	+				-1.8
23,546	+				-2.0
23,546	+				-2.6
23,546	+				+0.3
23,546	+				+0.3
23,546	+				-0.3
23,546	+				+0.1
23,546	+				-0.3
23,546	+				+0.9
23,546	+				-2.1
23,546	+				-1.0
23,546	+				-0.5
23,546	+				-0.7
23,546	+				-2.3
23,546	+				-1.6
23,546	+				-1.7
23,546	+				-0.6
23,546	+				-1.0
23,546	+				-0.0
23,546	+				-1.7
23,546	+				+0.3
23,546	+				+0.2
23,546	+				-1.3
23,547	-				-0.2
23,547	-				-0.5
23,547	-				-0.2
23,547	-				-1.3
23,547	-				-1.0
23,547	-				-1.9
23,547	-				-0.8
23,547	-				+0.4
23,547	-				-0.8
23,547	-				+1.3
23,547	-				+0.6
23,547	-				+1.1
23,547	-				-1.7
23,547	-				-0.3
23,547	-				-1.7
23,547	-				-1.2
23,547	-				-0.7
23,547	-				-0.2
23,547	-				-1.3
23,547	-				+0.1
23,547	-				-0.2
23,547	-				-0.5
23,547	-				-0.4
23,547	-				-1.0
23,547	-				-1.6
23,547	-				-1.2
23,547	-				-0.8
23,547	-				-2.7
23,547	-				-0.6
23,547	-				-1.4
23,547	-				-1.0
23,547	-				-1.5
23,547	-				+1.1
23,547	-				+0.5
23,547	-				-2.0
23,547	-				-0.7
23,547	-				+0.0
23,547	-				-0.8
23,547	-				-2.7
23,547	-				-2.3
23,547	-				-0.2
23,567	+				-0.5
23,567	+				-2.3
23,568	-				+0.1
23,576	+				-0.4
23,576	+				-1.6
23,576	+				-0.2
23,576	+				+0.5
23,576	+				-3.0
23,576	+				+0.9
23,577	-				-0.7
23,577	-				-0.8
23,577	-				+0.7
23,577	-				-0.1
23,577	-				-0.5
23,577	-				+0.3
23,577	-				-0.7
23,577	-				-0.3
23,577	-				-1.3
23,577	-				-2.2
23,609	+				-2.4
23,609	+				+1.5
23,610	-				-0.5
23,610	-				-0.0
23,610	-				-0.5
23,676	+				-1.0
23,676	+				-1.9
23,677	-				+0.1
23,695	+		EX31_RS15040	0.11	+0.1
23,695	+		EX31_RS15040	0.11	-0.6
23,695	+		EX31_RS15040	0.11	+0.3
23,695	+		EX31_RS15040	0.11	-0.4
23,695	+		EX31_RS15040	0.11	-1.9
23,696	-		EX31_RS15040	0.11	+0.8
23,700	-		EX31_RS15040	0.11	-0.0
23,700	-		EX31_RS15040	0.11	+0.1
23,700	-		EX31_RS15040	0.11	+1.4
23,700	-		EX31_RS15040	0.11	+0.3
23,725	+		EX31_RS15040	0.13	-0.3
23,725	+		EX31_RS15040	0.13	+0.6
23,725	+		EX31_RS15040	0.13	-0.7
23,726	-		EX31_RS15040	0.13	+0.4
23,726	-		EX31_RS15040	0.13	-0.6
23,726	-		EX31_RS15040	0.13	-1.1
23,726	-		EX31_RS15040	0.13	-0.8
23,726	-		EX31_RS15040	0.13	-0.1
23,734	-		EX31_RS15040	0.14	-1.6
23,756	-		EX31_RS15040	0.16	-0.2
23,827	+		EX31_RS15040	0.21	-0.9
23,827	+		EX31_RS15040	0.21	-0.7
23,827	+		EX31_RS15040	0.21	-1.5
23,854	+		EX31_RS15040	0.23	+0.4
23,854	+		EX31_RS15040	0.23	-0.7
23,854	+		EX31_RS15040	0.23	+0.5
23,855	-		EX31_RS15040	0.23	-0.3
23,855	-		EX31_RS15040	0.23	-0.2
23,855	-		EX31_RS15040	0.23	-0.7
23,855	-		EX31_RS15040	0.23	-1.0
23,855	-		EX31_RS15040	0.23	-0.2
23,855	-		EX31_RS15040	0.23	-0.0
23,855	-		EX31_RS15040	0.23	+0.7
23,859	-		EX31_RS15040	0.24	-0.3
23,859	-		EX31_RS15040	0.24	+1.2
23,859	-		EX31_RS15040	0.24	+1.0
23,859	-		EX31_RS15040	0.24	-0.4
24,105	+		EX31_RS15040	0.43	-0.3
24,105	+		EX31_RS15040	0.43	+0.2
24,106	-		EX31_RS15040	0.43	-1.5
24,137	-		EX31_RS15040	0.45	-0.9
24,137	-		EX31_RS15040	0.45	-0.0
24,203	+		EX31_RS15040	0.50	-3.2
24,204	-		EX31_RS15040	0.50	-0.4
24,204	-		EX31_RS15040	0.50	-0.1
24,278	+		EX31_RS15040	0.56	+0.0
24,279	-		EX31_RS15040	0.56	-0.6
24,279	-		EX31_RS15040	0.56	+0.5
24,312	-		EX31_RS15040	0.59	-0.6
24,338	+		EX31_RS15040	0.61	-0.7
24,338	+		EX31_RS15040	0.61	+3.3
24,338	+		EX31_RS15040	0.61	-1.3
24,339	-		EX31_RS15040	0.61	-0.6
24,339	-		EX31_RS15040	0.61	-1.2
24,339	-		EX31_RS15040	0.61	-1.6
24,339	-		EX31_RS15040	0.61	+0.3
24,339	-		EX31_RS15040	0.61	-1.0
24,339	-		EX31_RS15040	0.61	+0.6
24,339	-		EX31_RS15040	0.61	+0.6
24,339	-		EX31_RS15040	0.61	-0.8
24,339	-		EX31_RS15040	0.61	-0.3
24,339	-		EX31_RS15040	0.61	+0.1
24,339	-		EX31_RS15040	0.61	-0.5
24,339	-		EX31_RS15040	0.61	-0.6
24,358	-		EX31_RS15040	0.62	+0.8
24,358	-		EX31_RS15040	0.62	-0.7
24,398	+		EX31_RS15040	0.65	-1.6
24,399	-		EX31_RS15040	0.65	-1.6
24,399	-		EX31_RS15040	0.65	+0.5
24,403	+		EX31_RS15040	0.66	-1.8
24,404	-		EX31_RS15040	0.66	+0.3
24,404	-		EX31_RS15040	0.66	-1.7
24,404	-		EX31_RS15040	0.66	-2.9
24,461	+		EX31_RS15040	0.70	-0.3
24,461	+		EX31_RS15040	0.70	+0.3
24,461	+		EX31_RS15040	0.70	+0.9
24,462	-		EX31_RS15040	0.70	+0.5
24,462	-		EX31_RS15040	0.70	-0.7
24,476	-		EX31_RS15040	0.71	-1.2
24,501	+		EX31_RS15040	0.73	+2.4
24,502	-		EX31_RS15040	0.73	-1.3
24,515	+		EX31_RS15040	0.74	-0.0
24,525	+		EX31_RS15040	0.75	-0.3
24,525	+		EX31_RS15040	0.75	-0.6
24,525	+		EX31_RS15040	0.75	+0.3
24,526	-		EX31_RS15040	0.75	-2.6
24,526	-		EX31_RS15040	0.75	+0.3
24,526	-		EX31_RS15040	0.75	-0.5