Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_19905

Experiment: L-Aspartic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (C)
4,458,336	+				+0.1
4,458,336	+				-0.2
4,458,391	+				+0.5
4,458,481	+				+0.4
4,458,543	+				+0.6
4,458,564	+				-0.6
4,458,564	+				+0.5
4,458,564	+				+0.0
4,458,565	-				-0.4
4,458,565	-				+0.4
4,458,625	-				-1.0
4,458,625	-				+0.4
4,458,641	+		AO356_19900	0.12	-1.1
4,458,642	-		AO356_19900	0.12	-1.3
4,458,642	-		AO356_19900	0.12	-0.7
4,458,787	-		AO356_19900	0.35	-1.8
4,458,787	-		AO356_19900	0.35	-1.1
4,458,800	+		AO356_19900	0.37	-2.6
4,458,800	+		AO356_19900	0.37	+0.1
4,458,800	+		AO356_19900	0.37	-1.3
4,458,801	-		AO356_19900	0.37	-0.2
4,458,811	+		AO356_19900	0.39	-0.8
4,458,811	+		AO356_19900	0.39	-1.2
4,458,811	+		AO356_19900	0.39	-0.2
4,458,811	+		AO356_19900	0.39	-1.3
4,458,812	-		AO356_19900	0.39	-1.6
4,458,830	+		AO356_19900	0.42	-1.9
4,458,830	+		AO356_19900	0.42	-2.2
4,458,831	-		AO356_19900	0.42	+0.2
4,458,831	-		AO356_19900	0.42	-1.2
4,458,831	-		AO356_19900	0.42	-0.9
4,458,831	-		AO356_19900	0.42	-1.9
4,458,831	-		AO356_19900	0.42	+0.2
4,459,023	+		AO356_19900	0.72	-1.3
4,459,023	+		AO356_19900	0.72	-0.9
4,459,023	+		AO356_19900	0.72	-1.7
4,459,023	+		AO356_19900	0.72	-1.5
4,459,024	-		AO356_19900	0.73	-1.9
4,459,024	-		AO356_19900	0.73	-2.1
4,459,026	-		AO356_19900	0.73	-0.7
4,459,106	+		AO356_19900	0.85	-1.0
4,459,107	-		AO356_19900	0.86	-0.3
4,459,107	-		AO356_19900	0.86	-0.8
4,459,107	-		AO356_19900	0.86	+0.1
4,459,120	+		AO356_19900	0.88	-0.6
4,459,121	-		AO356_19900	0.88	-0.6
4,459,121	-		AO356_19900	0.88	-0.6
4,459,121	-		AO356_19900	0.88	-1.1
4,459,121	-		AO356_19900	0.88	+0.7
4,459,157	-				-1.0
4,459,198	+				-0.6
4,459,199	-				+1.2
4,459,199	-				-0.3
4,459,210	+				+0.3
4,459,210	+				+0.3
4,459,210	+				-0.2
4,459,210	+				-0.9
4,459,211	-				-0.8
4,459,211	-				-0.0
4,459,211	-				-0.9
4,459,211	-				+0.3
4,459,211	-				-0.6
4,459,231	+				-0.2
4,459,231	+				+0.4
4,459,232	-				+2.1
4,459,232	-				+0.7
4,459,232	-				+0.2
4,459,248	+				+0.2
4,459,344	+		AO356_19905	0.11	+0.3
4,459,344	+		AO356_19905	0.11	+0.3
4,459,345	-		AO356_19905	0.11	-0.4
4,459,345	-		AO356_19905	0.11	+1.0
4,459,345	-		AO356_19905	0.11	-0.8
4,459,523	+		AO356_19905	0.25	+0.7
4,459,523	+		AO356_19905	0.25	-0.1
4,459,524	-		AO356_19905	0.25	-0.2
4,459,525	+		AO356_19905	0.25	+0.0
4,459,525	+		AO356_19905	0.25	+0.6
4,459,526	-		AO356_19905	0.25	+0.2
4,459,526	-		AO356_19905	0.25	+0.2
4,459,526	-		AO356_19905	0.25	+1.0
4,459,526	-		AO356_19905	0.25	+0.2
4,459,564	+		AO356_19905	0.28	+1.3
4,459,564	+		AO356_19905	0.28	+0.8
4,459,565	-		AO356_19905	0.28	+0.4
4,459,696	+		AO356_19905	0.39	-0.9
4,459,696	+		AO356_19905	0.39	-0.3
4,459,697	-		AO356_19905	0.39	+0.6
4,459,697	-		AO356_19905	0.39	+0.1
4,459,697	-		AO356_19905	0.39	+0.3
4,459,697	-		AO356_19905	0.39	+0.1
4,459,750	-		AO356_19905	0.43	-0.8
4,459,799	-		AO356_19905	0.47	-0.8
4,459,799	-		AO356_19905	0.47	+0.2
4,459,807	+		AO356_19905	0.48	+0.9
4,459,808	-		AO356_19905	0.48	+0.6
4,459,910	+		AO356_19905	0.56	-0.1
4,459,911	-		AO356_19905	0.56	+0.6
4,459,927	+		AO356_19905	0.57	+0.5
4,459,927	+		AO356_19905	0.57	+0.2
4,459,927	+		AO356_19905	0.57	-0.9
4,459,928	-		AO356_19905	0.57	+0.3
4,459,928	-		AO356_19905	0.57	-0.0
4,459,928	-		AO356_19905	0.57	+0.0
4,459,928	-		AO356_19905	0.57	+0.2
4,459,928	-		AO356_19905	0.57	+0.3
4,459,928	-		AO356_19905	0.57	+0.6
4,460,023	-		AO356_19905	0.65	-0.8
4,460,083	-		AO356_19905	0.70	+0.7
4,460,085	+		AO356_19905	0.70	-0.4
4,460,085	+		AO356_19905	0.70	+0.1
4,460,085	+		AO356_19905	0.70	-0.1
4,460,085	+		AO356_19905	0.70	+0.2
4,460,085	+		AO356_19905	0.70	-0.4
4,460,085	+		AO356_19905	0.70	+0.3
4,460,086	-		AO356_19905	0.70	-0.6
4,460,086	-		AO356_19905	0.70	-0.2
4,460,086	-		AO356_19905	0.70	+1.2
4,460,086	-		AO356_19905	0.70	-0.9
4,460,126	+		AO356_19905	0.73	+0.0
4,460,126	+		AO356_19905	0.73	+0.3
4,460,127	-		AO356_19905	0.73	-0.7
4,460,203	+		AO356_19905	0.79	+0.7
4,460,203	+		AO356_19905	0.79	+0.8
4,460,203	+		AO356_19905	0.79	+0.6
4,460,203	+		AO356_19905	0.79	+0.1
4,460,203	+		AO356_19905	0.79	+0.5
4,460,204	-		AO356_19905	0.79	+0.5
4,460,204	-		AO356_19905	0.79	-0.5
4,460,204	-		AO356_19905	0.79	+0.9
4,460,300	-		AO356_19905	0.87	+0.2
4,460,300	-		AO356_19905	0.87	+0.1
4,460,403	+				-0.7
4,460,403	+				+0.8
4,460,404	-				-0.9
4,460,404	-				+0.3
4,460,404	-				-0.4
4,460,404	-				-0.2
4,460,404	-				+0.3
4,460,404	-				+0.3
4,460,439	+				+0.0
4,460,479	+				-0.9
4,460,527	+				-0.8
4,460,528	-				-0.2
4,460,528	-				-0.2
4,460,613	-				-0.1
4,460,866	+		AO356_19910	0.30	-0.1
4,460,867	-		AO356_19910	0.30	-0.6
4,460,869	+		AO356_19910	0.30	+1.0
4,460,869	+		AO356_19910	0.30	+0.4
4,460,870	-		AO356_19910	0.30	+0.3
4,460,870	-		AO356_19910	0.30	+1.9
4,460,870	-		AO356_19910	0.30	+0.3
4,460,883	-		AO356_19910	0.31	-1.0
4,460,902	+		AO356_19910	0.33	+0.9
4,461,001	-		AO356_19910	0.41	-0.4
4,461,001	-		AO356_19910	0.41	+0.5
4,461,001	-		AO356_19910	0.41	+0.2
4,461,013	+		AO356_19910	0.42	+1.1
4,461,014	-		AO356_19910	0.43	-0.3
4,461,014	-		AO356_19910	0.43	-0.0
4,461,041	-		AO356_19910	0.45	-0.5
4,461,100	+		AO356_19910	0.50	+0.2
4,461,100	+		AO356_19910	0.50	-0.5
4,461,100	+		AO356_19910	0.50	-0.2
4,461,100	+		AO356_19910	0.50	+0.3
4,461,101	-		AO356_19910	0.50	-0.3
4,461,116	-		AO356_19910	0.51	+0.1
4,461,116	-		AO356_19910	0.51	+0.8
4,461,116	-		AO356_19910	0.51	+1.1
4,461,123	+		AO356_19910	0.52	-0.5
4,461,123	+		AO356_19910	0.52	+0.2
4,461,123	+		AO356_19910	0.52	+1.3
4,461,124	-		AO356_19910	0.52	+0.0
4,461,124	-		AO356_19910	0.52	-1.6
4,461,156	+		AO356_19910	0.55	+0.8
4,461,173	+		AO356_19910	0.56	+0.5
4,461,173	+		AO356_19910	0.56	+0.2
4,461,173	+		AO356_19910	0.56	+0.9
4,461,173	+		AO356_19910	0.56	-0.2
4,461,174	-		AO356_19910	0.57	+0.2
4,461,174	-		AO356_19910	0.57	-1.3
4,461,236	+		AO356_19910	0.62	+2.0
4,461,356	+		AO356_19910	0.72	-0.7
4,461,383	+		AO356_19910	0.75	+0.6
4,461,384	-		AO356_19910	0.75	+0.4
4,461,397	+		AO356_19910	0.76	+0.4
4,461,397	+		AO356_19910	0.76	+0.6
4,461,397	+		AO356_19910	0.76	-1.3
4,461,397	+		AO356_19910	0.76	-0.2
4,461,397	+		AO356_19910	0.76	+0.7
4,461,397	+		AO356_19910	0.76	-0.2
4,461,398	-		AO356_19910	0.76	-0.4
4,461,398	-		AO356_19910	0.76	-0.1
4,461,398	-		AO356_19910	0.76	-0.6
4,461,398	-		AO356_19910	0.76	+0.6
4,461,398	-		AO356_19910	0.76	+0.7
4,461,398	-		AO356_19910	0.76	+1.0
4,461,398	-		AO356_19910	0.76	+0.2
4,461,398	-		AO356_19910	0.76	-0.2
4,461,403	+		AO356_19910	0.77	+2.1
4,461,403	+		AO356_19910	0.77	-0.9
4,461,403	+		AO356_19910	0.77	-0.3
4,461,403	+		AO356_19910	0.77	+0.7
4,461,403	+		AO356_19910	0.77	+0.6
4,461,403	+		AO356_19910	0.77	+0.7
4,461,403	+		AO356_19910	0.77	+0.2
4,461,403	+		AO356_19910	0.77	+0.7
4,461,403	+		AO356_19910	0.77	-0.1
4,461,404	-		AO356_19910	0.77	+0.0
4,461,404	-		AO356_19910	0.77	+0.6
4,461,404	-		AO356_19910	0.77	+0.5
4,461,404	-		AO356_19910	0.77	+0.8
4,461,404	-		AO356_19910	0.77	+0.5
4,461,404	-		AO356_19910	0.77	+0.1
4,461,454	+		AO356_19910	0.81	-0.4
4,461,454	+		AO356_19910	0.81	+0.6
4,461,454	+		AO356_19910	0.81	+0.6
4,461,454	+		AO356_19910	0.81	-0.5
4,461,454	+		AO356_19910	0.81	-0.1
4,461,454	+		AO356_19910	0.81	+0.0
4,461,455	-		AO356_19910	0.81	+0.2
4,461,455	-		AO356_19910	0.81	-0.1
4,461,455	-		AO356_19910	0.81	-0.4
4,461,455	-		AO356_19910	0.81	+0.1
4,461,455	-		AO356_19910	0.81	-0.3
4,461,455	-		AO356_19910	0.81	+0.8
4,461,455	-		AO356_19910	0.81	-0.4
4,461,455	-		AO356_19910	0.81	+0.4
4,461,455	-		AO356_19910	0.81	+0.8
4,461,455	-		AO356_19910	0.81	-0.6
4,461,455	-		AO356_19910	0.81	-0.6