Experiment: casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS09050 and EX31_RS24945 are separated by 135 nucleotides
EX31_RS09050: EX31_RS09050 - cation/acetate symporter ActP, at 324,211 to 325,878
_RS09050
EX31_RS24945: EX31_RS24945 - 5S ribosomal RNA, at 326,014 to 326,102
_RS24945
Position (kb) 326
327 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 325.123 kb on + strand, within EX31_RS09050 at 325.123 kb on + strand, within EX31_RS09050 at 325.123 kb on + strand, within EX31_RS09050 at 325.123 kb on + strand, within EX31_RS09050 at 325.123 kb on + strand, within EX31_RS09050 at 325.123 kb on + strand, within EX31_RS09050 at 325.123 kb on + strand, within EX31_RS09050 at 325.123 kb on + strand, within EX31_RS09050 at 325.123 kb on + strand, within EX31_RS09050 at 325.123 kb on + strand, within EX31_RS09050 at 325.123 kb on + strand, within EX31_RS09050 at 325.123 kb on + strand, within EX31_RS09050 at 325.123 kb on + strand, within EX31_RS09050 at 325.123 kb on + strand, within EX31_RS09050 at 325.124 kb on - strand, within EX31_RS09050 at 325.124 kb on - strand, within EX31_RS09050 at 325.124 kb on - strand, within EX31_RS09050 at 325.124 kb on - strand, within EX31_RS09050 at 325.124 kb on - strand, within EX31_RS09050 at 325.129 kb on - strand, within EX31_RS09050 at 325.144 kb on + strand, within EX31_RS09050 at 325.144 kb on + strand, within EX31_RS09050 at 325.145 kb on - strand, within EX31_RS09050 at 325.145 kb on - strand, within EX31_RS09050 at 325.150 kb on + strand, within EX31_RS09050 at 325.182 kb on + strand, within EX31_RS09050 at 325.183 kb on - strand, within EX31_RS09050 at 325.212 kb on + strand, within EX31_RS09050 at 325.213 kb on - strand, within EX31_RS09050 at 325.227 kb on + strand, within EX31_RS09050 at 325.227 kb on + strand, within EX31_RS09050 at 325.228 kb on - strand, within EX31_RS09050 at 325.228 kb on - strand, within EX31_RS09050 at 325.229 kb on + strand, within EX31_RS09050 at 325.229 kb on + strand, within EX31_RS09050 at 325.229 kb on + strand, within EX31_RS09050 at 325.229 kb on + strand, within EX31_RS09050 at 325.229 kb on + strand, within EX31_RS09050 at 325.230 kb on - strand, within EX31_RS09050 at 325.230 kb on - strand, within EX31_RS09050 at 325.232 kb on + strand, within EX31_RS09050 at 325.245 kb on + strand, within EX31_RS09050 at 325.245 kb on + strand, within EX31_RS09050 at 325.245 kb on + strand, within EX31_RS09050 at 325.245 kb on + strand, within EX31_RS09050 at 325.246 kb on - strand, within EX31_RS09050 at 325.246 kb on - strand, within EX31_RS09050 at 325.246 kb on - strand, within EX31_RS09050 at 325.246 kb on - strand, within EX31_RS09050 at 325.302 kb on + strand, within EX31_RS09050 at 325.303 kb on - strand, within EX31_RS09050 at 325.387 kb on + strand, within EX31_RS09050 at 325.387 kb on + strand, within EX31_RS09050 at 325.411 kb on - strand, within EX31_RS09050 at 325.509 kb on + strand, within EX31_RS09050 at 325.634 kb on + strand, within EX31_RS09050 at 325.638 kb on + strand, within EX31_RS09050 at 325.649 kb on + strand, within EX31_RS09050 at 325.650 kb on - strand, within EX31_RS09050 at 325.650 kb on - strand, within EX31_RS09050 at 325.650 kb on - strand, within EX31_RS09050 at 325.650 kb on - strand, within EX31_RS09050 at 325.671 kb on + strand, within EX31_RS09050 at 325.671 kb on + strand, within EX31_RS09050 at 325.671 kb on + strand, within EX31_RS09050 at 325.671 kb on + strand, within EX31_RS09050 at 325.671 kb on + strand, within EX31_RS09050 at 325.688 kb on + strand, within EX31_RS09050 at 325.689 kb on - strand, within EX31_RS09050 at 325.698 kb on + strand, within EX31_RS09050 at 325.698 kb on + strand, within EX31_RS09050 at 325.709 kb on - strand, within EX31_RS09050 at 325.782 kb on + strand at 325.782 kb on + strand at 325.782 kb on + strand at 325.782 kb on + strand at 325.783 kb on - strand at 325.869 kb on + strand at 325.869 kb on + strand at 325.869 kb on + strand at 325.870 kb on - strand at 325.883 kb on + strand at 325.883 kb on + strand at 325.884 kb on - strand at 325.896 kb on + strand at 325.945 kb on - strand at 325.958 kb on + strand at 326.029 kb on - strand, within EX31_RS24945 at 326.029 kb on - strand, within EX31_RS24945
Per-strain Table
Position Strand Gene LocusTag Fraction casaminos (C) remove 325,123 + EX31_RS09050 0.55 -0.0 325,123 + EX31_RS09050 0.55 +0.4 325,123 + EX31_RS09050 0.55 -0.5 325,123 + EX31_RS09050 0.55 -0.9 325,123 + EX31_RS09050 0.55 -2.7 325,123 + EX31_RS09050 0.55 -0.0 325,123 + EX31_RS09050 0.55 -3.3 325,123 + EX31_RS09050 0.55 -0.7 325,123 + EX31_RS09050 0.55 +0.8 325,123 + EX31_RS09050 0.55 +0.2 325,123 + EX31_RS09050 0.55 -0.2 325,123 + EX31_RS09050 0.55 -0.3 325,123 + EX31_RS09050 0.55 -0.6 325,123 + EX31_RS09050 0.55 +0.6 325,124 - EX31_RS09050 0.55 +1.8 325,124 - EX31_RS09050 0.55 +0.4 325,124 - EX31_RS09050 0.55 +1.4 325,124 - EX31_RS09050 0.55 -1.4 325,124 - EX31_RS09050 0.55 +0.6 325,129 - EX31_RS09050 0.55 +0.2 325,144 + EX31_RS09050 0.56 -0.0 325,144 + EX31_RS09050 0.56 +0.4 325,145 - EX31_RS09050 0.56 -1.9 325,145 - EX31_RS09050 0.56 +3.0 325,150 + EX31_RS09050 0.56 -1.4 325,182 + EX31_RS09050 0.58 +0.8 325,183 - EX31_RS09050 0.58 -0.8 325,212 + EX31_RS09050 0.60 +0.1 325,213 - EX31_RS09050 0.60 +0.8 325,227 + EX31_RS09050 0.61 -0.5 325,227 + EX31_RS09050 0.61 +1.4 325,228 - EX31_RS09050 0.61 +1.2 325,228 - EX31_RS09050 0.61 +0.6 325,229 + EX31_RS09050 0.61 +0.8 325,229 + EX31_RS09050 0.61 +0.8 325,229 + EX31_RS09050 0.61 +0.2 325,229 + EX31_RS09050 0.61 +0.6 325,229 + EX31_RS09050 0.61 +1.7 325,230 - EX31_RS09050 0.61 +1.9 325,230 - EX31_RS09050 0.61 +0.1 325,232 + EX31_RS09050 0.61 -0.8 325,245 + EX31_RS09050 0.62 +0.2 325,245 + EX31_RS09050 0.62 +0.8 325,245 + EX31_RS09050 0.62 +0.5 325,245 + EX31_RS09050 0.62 +0.1 325,246 - EX31_RS09050 0.62 +0.4 325,246 - EX31_RS09050 0.62 -1.1 325,246 - EX31_RS09050 0.62 -1.2 325,246 - EX31_RS09050 0.62 +0.1 325,302 + EX31_RS09050 0.65 +0.1 325,303 - EX31_RS09050 0.65 -0.2 325,387 + EX31_RS09050 0.71 -0.6 325,387 + EX31_RS09050 0.71 +0.6 325,411 - EX31_RS09050 0.72 +0.2 325,509 + EX31_RS09050 0.78 +1.4 325,634 + EX31_RS09050 0.85 +2.0 325,638 + EX31_RS09050 0.86 +1.4 325,649 + EX31_RS09050 0.86 -1.0 325,650 - EX31_RS09050 0.86 +0.4 325,650 - EX31_RS09050 0.86 +1.4 325,650 - EX31_RS09050 0.86 -0.0 325,650 - EX31_RS09050 0.86 +1.0 325,671 + EX31_RS09050 0.88 -0.6 325,671 + EX31_RS09050 0.88 +1.4 325,671 + EX31_RS09050 0.88 -1.4 325,671 + EX31_RS09050 0.88 +0.2 325,671 + EX31_RS09050 0.88 +0.9 325,688 + EX31_RS09050 0.89 +0.4 325,689 - EX31_RS09050 0.89 +0.4 325,698 + EX31_RS09050 0.89 -0.1 325,698 + EX31_RS09050 0.89 -0.4 325,709 - EX31_RS09050 0.90 -1.4 325,782 + +0.0 325,782 + +0.5 325,782 + -1.7 325,782 + +0.3 325,783 - -0.7 325,869 + -1.9 325,869 + -0.4 325,869 + -0.0 325,870 - +0.7 325,883 + +1.1 325,883 + +0.2 325,884 - +0.5 325,896 + -1.4 325,945 - +0.3 325,958 + +0.4 326,029 - EX31_RS24945 0.17 -1.1 326,029 - EX31_RS24945 0.17 -0.5
Or see this region's nucleotide sequence