Strain Fitness in Rahnella sp. WP5 around EX31_RS14210

Experiment: casaminos (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	casaminos (C)
19,960	+		EX31_RS14205	0.29	+0.3
20,034	+		EX31_RS14205	0.37	+0.2
20,093	-		EX31_RS14205	0.44	+0.2
20,105	-		EX31_RS14205	0.45	+0.1
20,105	-		EX31_RS14205	0.45	+0.5
20,167	+		EX31_RS14205	0.52	+0.1
20,167	+		EX31_RS14205	0.52	+1.2
20,168	-		EX31_RS14205	0.52	+1.0
20,168	-		EX31_RS14205	0.52	+0.7
20,214	+		EX31_RS14205	0.57	+0.8
20,214	+		EX31_RS14205	0.57	+0.7
20,214	+		EX31_RS14205	0.57	-2.0
20,214	+		EX31_RS14205	0.57	+0.0
20,214	+		EX31_RS14205	0.57	+0.2
20,215	-		EX31_RS14205	0.57	-0.1
20,215	-		EX31_RS14205	0.57	-0.7
20,290	-		EX31_RS14205	0.65	+0.6
20,332	+		EX31_RS14205	0.70	+0.6
20,333	-		EX31_RS14205	0.70	-0.3
20,333	-		EX31_RS14205	0.70	-0.4
20,374	+		EX31_RS14205	0.74	-0.6
20,399	-		EX31_RS14205	0.77	-0.4
20,446	+		EX31_RS14205	0.82	-0.7
20,447	-		EX31_RS14205	0.83	-0.4
20,473	+		EX31_RS14205	0.85	-0.1
20,473	+		EX31_RS14205	0.85	-0.7
20,474	-		EX31_RS14205	0.85	+0.4
20,474	-		EX31_RS14205	0.85	-0.4
20,474	-		EX31_RS14205	0.85	+0.1
20,474	-		EX31_RS14205	0.85	-0.4
20,474	-		EX31_RS14205	0.85	-0.2
20,474	-		EX31_RS14205	0.85	-0.0
20,488	+		EX31_RS14205	0.87	+0.3
20,488	+		EX31_RS14205	0.87	-0.2
20,488	+		EX31_RS14205	0.87	+0.3
20,488	+		EX31_RS14205	0.87	+0.2
20,488	+		EX31_RS14205	0.87	+1.7
20,488	+		EX31_RS14205	0.87	+0.3
20,488	+		EX31_RS14205	0.87	-0.2
20,488	+		EX31_RS14205	0.87	-0.0
20,489	-		EX31_RS14205	0.87	-0.4
20,489	-		EX31_RS14205	0.87	-1.0
20,489	-		EX31_RS14205	0.87	+0.9
20,489	-		EX31_RS14205	0.87	+0.7
20,489	-		EX31_RS14205	0.87	-0.1
20,489	-		EX31_RS14205	0.87	-0.0
20,489	-		EX31_RS14205	0.87	+0.3
20,506	+		EX31_RS14205	0.89	-1.4
20,507	-		EX31_RS14205	0.89	+1.2
20,549	+				+0.0
20,549	+				+1.4
20,549	+				+0.6
20,550	-				-2.9
20,605	+				-0.8
20,605	+				-0.1
20,606	-				-1.3
20,612	+				-0.1
20,612	+				-0.9
20,639	-				+2.2
20,639	-				+1.0
20,639	-				+0.4
20,676	-				-0.4
20,678	-				-0.1
20,716	+				+0.6
20,717	-				-2.2
20,717	-				-0.4
20,738	+				+0.2
20,738	+				+0.9
20,739	-				+0.4
20,739	-				+1.4
20,739	-				+0.3
20,817	-				+0.5
20,854	+				+0.1
20,854	+				-0.9
20,855	-				+0.4
20,876	+				+0.2
20,876	+				+1.1
20,876	+				+0.2
20,953	+				-0.5
21,073	+				+0.6
21,074	-				+1.3
21,074	-				+1.1
21,074	-				-0.2
21,162	+		EX31_RS14210	0.13	-1.9
21,162	+		EX31_RS14210	0.13	-2.1
21,162	+		EX31_RS14210	0.13	+0.2
21,162	+		EX31_RS14210	0.13	+0.7
21,163	-		EX31_RS14210	0.13	-2.1
21,163	-		EX31_RS14210	0.13	+0.9
21,163	-		EX31_RS14210	0.13	+0.2
21,163	-		EX31_RS14210	0.13	+0.3
21,230	-		EX31_RS14210	0.15	-0.3
21,283	-		EX31_RS14210	0.18	+0.7
21,328	-		EX31_RS14210	0.19	+1.1
21,328	-		EX31_RS14210	0.19	-1.1
21,438	+		EX31_RS14210	0.24	+1.0
21,439	-		EX31_RS14210	0.24	+1.1
21,452	+		EX31_RS14210	0.25	+1.1
21,452	+		EX31_RS14210	0.25	+1.4
21,452	+		EX31_RS14210	0.25	+0.2
21,453	-		EX31_RS14210	0.25	+0.3
21,453	-		EX31_RS14210	0.25	+0.2
21,453	-		EX31_RS14210	0.25	-0.2
21,453	-		EX31_RS14210	0.25	+0.3
21,453	-		EX31_RS14210	0.25	-0.5
21,453	-		EX31_RS14210	0.25	+1.6
21,453	-		EX31_RS14210	0.25	+0.4
21,489	-		EX31_RS14210	0.26	+1.6
21,490	+		EX31_RS14210	0.26	-0.3
21,490	+		EX31_RS14210	0.26	-1.0
21,490	+		EX31_RS14210	0.26	-0.2
21,490	+		EX31_RS14210	0.26	-0.2
21,490	+		EX31_RS14210	0.26	+0.5
21,490	+		EX31_RS14210	0.26	+0.3
21,490	+		EX31_RS14210	0.26	+1.3
21,490	+		EX31_RS14210	0.26	+0.7
21,491	-		EX31_RS14210	0.26	-0.6
21,491	-		EX31_RS14210	0.26	+0.6
21,491	-		EX31_RS14210	0.26	+0.0
21,491	-		EX31_RS14210	0.26	+0.9
21,491	-		EX31_RS14210	0.26	-0.3
21,491	-		EX31_RS14210	0.26	+0.8
21,491	-		EX31_RS14210	0.26	-0.2
21,491	-		EX31_RS14210	0.26	+1.6
21,491	-		EX31_RS14210	0.26	+0.2
21,538	+		EX31_RS14210	0.28	+1.0
21,539	-		EX31_RS14210	0.28	-1.0
21,542	+		EX31_RS14210	0.28	+0.2
21,542	+		EX31_RS14210	0.28	-0.3
21,542	+		EX31_RS14210	0.28	+0.7
21,542	+		EX31_RS14210	0.28	+1.2
21,542	+		EX31_RS14210	0.28	+0.1
21,543	-		EX31_RS14210	0.28	+0.1
21,543	-		EX31_RS14210	0.28	-0.0
21,595	+		EX31_RS14210	0.30	-0.2
21,595	+		EX31_RS14210	0.30	-0.0
21,595	+		EX31_RS14210	0.30	+0.4
21,596	-		EX31_RS14210	0.31	+0.5
21,596	-		EX31_RS14210	0.31	+1.7
21,596	-		EX31_RS14210	0.31	+1.2
21,613	+		EX31_RS14210	0.31	-0.7
21,614	-		EX31_RS14210	0.31	+0.6
21,657	+		EX31_RS14210	0.33	+0.6
21,668	-		EX31_RS14210	0.33	+0.8
21,668	-		EX31_RS14210	0.33	+0.2
21,668	-		EX31_RS14210	0.33	+1.1
21,766	+		EX31_RS14210	0.37	-0.4
21,766	+		EX31_RS14210	0.37	+0.6
21,766	+		EX31_RS14210	0.37	+0.0
21,766	+		EX31_RS14210	0.37	+0.8
21,766	+		EX31_RS14210	0.37	+0.9
21,767	-		EX31_RS14210	0.38	-0.3
21,767	-		EX31_RS14210	0.38	+1.2
21,767	-		EX31_RS14210	0.38	+0.3
21,767	-		EX31_RS14210	0.38	+0.6
21,770	+		EX31_RS14210	0.38	+0.3
21,771	-		EX31_RS14210	0.38	+0.6
21,771	-		EX31_RS14210	0.38	+0.7
21,771	-		EX31_RS14210	0.38	-0.1
21,771	-		EX31_RS14210	0.38	+1.0
21,771	-		EX31_RS14210	0.38	+1.0
21,836	+		EX31_RS14210	0.40	+1.4
21,836	+		EX31_RS14210	0.40	+0.4
21,836	+		EX31_RS14210	0.40	+0.1
21,981	+		EX31_RS14210	0.46	+0.7
21,981	+		EX31_RS14210	0.46	+0.6
21,982	-		EX31_RS14210	0.46	+1.2
22,019	+		EX31_RS14210	0.48	+0.2
22,195	+		EX31_RS14210	0.55	+1.1
22,195	+		EX31_RS14210	0.55	+1.4
22,196	-		EX31_RS14210	0.55	+0.2
22,196	-		EX31_RS14210	0.55	+1.1
22,196	-		EX31_RS14210	0.55	+0.7
22,215	-		EX31_RS14210	0.56	+1.2
22,262	+		EX31_RS14210	0.58	+0.6
22,337	+		EX31_RS14210	0.61	+1.8
22,337	+		EX31_RS14210	0.61	+1.0
22,337	+		EX31_RS14210	0.61	+2.1
22,337	+		EX31_RS14210	0.61	+0.1
22,337	+		EX31_RS14210	0.61	+0.8
22,338	-		EX31_RS14210	0.61	+0.3
22,338	-		EX31_RS14210	0.61	+0.9
22,338	-		EX31_RS14210	0.61	+1.8
22,338	-		EX31_RS14210	0.61	+1.3
22,395	-		EX31_RS14210	0.63	+0.5
22,421	-		EX31_RS14210	0.64	-0.4
22,579	+		EX31_RS14210	0.71	+0.2
22,580	-		EX31_RS14210	0.71	+0.9
22,652	-		EX31_RS14210	0.74	+1.7
22,726	+		EX31_RS14210	0.77	+1.3
22,727	-		EX31_RS14210	0.77	+1.2
22,727	-		EX31_RS14210	0.77	+2.3
22,727	-		EX31_RS14210	0.77	+0.4
22,859	+		EX31_RS14210	0.82	-0.2
22,859	+		EX31_RS14210	0.82	+2.6
22,859	+		EX31_RS14210	0.82	+0.8
22,859	+		EX31_RS14210	0.82	+0.4
22,860	-		EX31_RS14210	0.82	+1.4
22,860	-		EX31_RS14210	0.82	+0.4
22,860	-		EX31_RS14210	0.82	+0.7
22,922	-		EX31_RS14210	0.85	+0.1
22,922	-		EX31_RS14210	0.85	+0.2
22,922	-		EX31_RS14210	0.85	+1.4
22,979	+		EX31_RS14210	0.87	+0.6
22,979	+		EX31_RS14210	0.87	+1.3
22,980	-		EX31_RS14210	0.87	+1.7
22,980	-		EX31_RS14210	0.87	+1.2
22,980	-		EX31_RS14210	0.87	+1.0
22,991	+		EX31_RS14210	0.88	-0.0
22,991	+		EX31_RS14210	0.88	+0.7
22,992	-		EX31_RS14210	0.88	-0.4
22,992	-		EX31_RS14210	0.88	+0.5
22,992	-		EX31_RS14210	0.88	+0.1
23,174	-				+0.8
23,174	-				-0.3
23,183	+				+1.8
23,203	+				+1.3
23,204	-				-0.1
23,204	-				+1.4
23,204	-				+3.9
23,228	+				+1.9
23,229	-				+1.3
23,288	+				+1.4
23,288	+				+0.9
23,288	+				+0.8
23,288	+				+1.1
23,288	+				+1.0
23,288	+				-0.6
23,288	+				+1.3
23,288	+				+0.8
23,288	+				+1.6
23,288	+				+0.8
23,288	+				-0.8
23,288	+				+1.9
23,288	+				+1.7
23,289	-				+1.2
23,289	-				-2.3
23,289	-				+0.2
23,289	-				+2.0
23,289	-				+1.0
23,289	-				+0.8
23,289	-				+0.2
23,289	-				-0.2
23,289	-				+1.2
23,289	-				+0.4
23,289	-				+0.6
23,289	-				-2.0
23,289	-				+1.1
23,289	-				-0.8
23,289	-				+0.8
23,289	-				+1.0
23,289	-				+1.6
23,289	-				+0.7
23,289	-				+0.8
23,289	-				+0.4
23,289	-				+0.8
23,289	-				-0.0
23,292	+				+1.6
23,292	+				+0.5
23,292	+				+1.0
23,292	+				+1.4
23,292	+				-1.0
23,293	-				+1.2
23,293	-				+1.6
23,293	-				+0.6
23,293	-				-0.6
23,293	-				+0.6
23,293	-				+0.9
23,293	-				+1.0
23,360	+				+0.9
23,360	+				+0.8
23,360	+				+1.7
23,361	+				+0.5
23,361	-				+0.1
23,368	+				+0.3
23,369	-				+0.5
23,488	+		EX31_RS14215	0.17	+0.5
23,489	-		EX31_RS14215	0.17	+0.9
23,492	+		EX31_RS14215	0.17	+0.6
23,493	-		EX31_RS14215	0.17	-0.1
23,493	-		EX31_RS14215	0.17	-0.0
23,493	-		EX31_RS14215	0.17	+0.7
23,493	-		EX31_RS14215	0.17	+0.0
23,493	-		EX31_RS14215	0.17	-0.3
23,493	-		EX31_RS14215	0.17	-0.0
23,493	-		EX31_RS14215	0.17	-0.0
23,625	+		EX31_RS14215	0.29	+0.1
23,626	-		EX31_RS14215	0.29	+0.0
23,626	-		EX31_RS14215	0.29	+0.2
23,626	-		EX31_RS14215	0.29	+0.1
23,655	-		EX31_RS14215	0.31	-0.8
23,658	+		EX31_RS14215	0.32	-0.3
23,659	-		EX31_RS14215	0.32	-0.8
23,659	-		EX31_RS14215	0.32	+0.1
23,659	-		EX31_RS14215	0.32	+0.5
23,659	-		EX31_RS14215	0.32	+0.1
23,736	+		EX31_RS14215	0.38	+1.0
23,736	+		EX31_RS14215	0.38	+2.2
23,736	+		EX31_RS14215	0.38	-1.1
23,736	+		EX31_RS14215	0.38	+0.2
23,736	+		EX31_RS14215	0.38	-0.2
23,736	+		EX31_RS14215	0.38	-0.9
23,736	+		EX31_RS14215	0.38	-1.8
23,737	-		EX31_RS14215	0.38	+1.0
23,737	-		EX31_RS14215	0.38	+0.2
23,737	-		EX31_RS14215	0.38	+0.8
23,737	-		EX31_RS14215	0.38	+0.0
23,737	-		EX31_RS14215	0.38	-0.1
23,737	-		EX31_RS14215	0.38	+0.3
23,737	-		EX31_RS14215	0.38	+1.1
23,737	-		EX31_RS14215	0.38	-0.5
23,737	-		EX31_RS14215	0.38	-0.1
23,737	-		EX31_RS14215	0.38	+0.9
23,737	-		EX31_RS14215	0.38	-0.4
23,737	-		EX31_RS14215	0.38	-0.9
23,737	-		EX31_RS14215	0.38	+0.7
23,737	-		EX31_RS14215	0.38	+0.2
23,812	+		EX31_RS14215	0.45	+0.4
23,812	+		EX31_RS14215	0.45	+0.5
23,812	+		EX31_RS14215	0.45	+1.6
23,812	+		EX31_RS14215	0.45	+0.1
23,812	+		EX31_RS14215	0.45	+1.1
23,813	-		EX31_RS14215	0.45	+0.4
23,813	-		EX31_RS14215	0.45	-0.4
23,813	-		EX31_RS14215	0.45	+0.3
23,813	-		EX31_RS14215	0.45	+0.2
23,813	-		EX31_RS14215	0.45	+0.7
23,813	-		EX31_RS14215	0.45	-0.3
23,813	-		EX31_RS14215	0.45	+0.1
23,816	+		EX31_RS14215	0.45	-0.3
23,816	+		EX31_RS14215	0.45	-0.0
23,816	+		EX31_RS14215	0.45	+0.2
23,816	+		EX31_RS14215	0.45	+0.3
23,816	+		EX31_RS14215	0.45	-0.0
23,816	+		EX31_RS14215	0.45	+0.9
23,816	+		EX31_RS14215	0.45	-1.2
23,817	-		EX31_RS14215	0.45	+2.9
23,817	-		EX31_RS14215	0.45	-0.0
23,817	-		EX31_RS14215	0.45	-0.8
23,856	+		EX31_RS14215	0.49	-0.4
23,857	-		EX31_RS14215	0.49	+0.3
23,857	-		EX31_RS14215	0.49	+0.7
23,857	-		EX31_RS14215	0.49	+0.3
23,857	-		EX31_RS14215	0.49	+1.0
23,857	-		EX31_RS14215	0.49	-0.2
23,860	+		EX31_RS14215	0.49	-1.2
23,860	+		EX31_RS14215	0.49	+0.4
23,860	+		EX31_RS14215	0.49	+1.1
23,860	+		EX31_RS14215	0.49	-0.2
23,861	-		EX31_RS14215	0.49	+0.4
23,861	-		EX31_RS14215	0.49	+0.3
23,861	-		EX31_RS14215	0.49	+1.2
23,861	-		EX31_RS14215	0.49	-0.6
23,861	-		EX31_RS14215	0.49	+0.3
23,861	-		EX31_RS14215	0.49	+1.6
23,861	-		EX31_RS14215	0.49	+0.6
23,861	-		EX31_RS14215	0.49	+0.7
23,861	-		EX31_RS14215	0.49	-0.4
23,861	-		EX31_RS14215	0.49	-1.4
23,863	+		EX31_RS14215	0.49	+0.6
23,863	+		EX31_RS14215	0.49	+1.1
23,863	+		EX31_RS14215	0.49	+0.2
23,863	+		EX31_RS14215	0.49	-1.7
23,863	+		EX31_RS14215	0.49	+0.2
23,863	+		EX31_RS14215	0.49	+1.2
23,864	-		EX31_RS14215	0.49	+0.4
23,864	-		EX31_RS14215	0.49	-0.1
23,864	-		EX31_RS14215	0.49	+0.6
23,864	-		EX31_RS14215	0.49	+0.4
23,864	-		EX31_RS14215	0.49	-0.8
23,864	-		EX31_RS14215	0.49	+1.3
23,864	-		EX31_RS14215	0.49	-1.1
23,864	-		EX31_RS14215	0.49	+0.9
23,864	-		EX31_RS14215	0.49	-0.3
23,864	-		EX31_RS14215	0.49	+0.7
23,879	+		EX31_RS14215	0.51	+0.6
23,880	-		EX31_RS14215	0.51	-0.6
23,880	-		EX31_RS14215	0.51	-1.1
24,200	-		EX31_RS14215	0.78	-0.8
24,200	-		EX31_RS14215	0.78	-1.0
24,223	+		EX31_RS14215	0.80	-0.2
24,224	-		EX31_RS14215	0.80	-0.2
24,224	-		EX31_RS14215	0.80	+1.6
24,224	-		EX31_RS14215	0.80	-0.3
24,224	-		EX31_RS14215	0.80	-1.0
24,224	-		EX31_RS14215	0.80	+1.2