Experiment: L-Lysine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_24265 and AO356_24270 are separated by 58 nucleotides AO356_24270 and AO356_24275 are separated by 111 nucleotides
AO356_24265: AO356_24265 - non-ribosomal peptide synthetase, at 5,457,036 to 5,470,982
_24265
AO356_24270: AO356_24270 - non-ribosomal peptide synthetase, at 5,471,041 to 5,474,103
_24270
AO356_24275: AO356_24275 - taurine catabolism dioxygenase TauD, at 5,474,215 to 5,475,261
_24275
Position (kb) 5471
5472
5473
5474
5475 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5470.421 kb on - strand at 5470.561 kb on + strand at 5471.486 kb on + strand, within AO356_24270 at 5471.487 kb on - strand, within AO356_24270 at 5471.487 kb on - strand, within AO356_24270 at 5471.487 kb on - strand, within AO356_24270 at 5471.561 kb on + strand, within AO356_24270 at 5471.562 kb on - strand, within AO356_24270 at 5471.751 kb on + strand, within AO356_24270 at 5471.966 kb on + strand, within AO356_24270 at 5471.966 kb on + strand, within AO356_24270 at 5471.966 kb on + strand, within AO356_24270 at 5471.967 kb on - strand, within AO356_24270 at 5471.967 kb on - strand, within AO356_24270 at 5471.967 kb on - strand, within AO356_24270 at 5471.967 kb on - strand, within AO356_24270 at 5471.967 kb on - strand, within AO356_24270 at 5472.140 kb on + strand, within AO356_24270 at 5472.141 kb on - strand, within AO356_24270 at 5472.336 kb on - strand, within AO356_24270 at 5472.336 kb on - strand, within AO356_24270 at 5472.422 kb on + strand, within AO356_24270 at 5472.423 kb on - strand, within AO356_24270 at 5472.423 kb on - strand, within AO356_24270 at 5472.431 kb on + strand, within AO356_24270 at 5472.591 kb on - strand, within AO356_24270 at 5472.591 kb on - strand, within AO356_24270 at 5472.591 kb on - strand, within AO356_24270 at 5472.591 kb on - strand, within AO356_24270 at 5472.632 kb on + strand, within AO356_24270 at 5473.181 kb on + strand, within AO356_24270 at 5473.181 kb on + strand, within AO356_24270 at 5473.181 kb on + strand, within AO356_24270 at 5473.182 kb on - strand, within AO356_24270 at 5473.184 kb on + strand, within AO356_24270 at 5473.222 kb on + strand, within AO356_24270 at 5473.757 kb on + strand, within AO356_24270 at 5473.757 kb on + strand, within AO356_24270 at 5473.829 kb on + strand at 5474.423 kb on + strand, within AO356_24275 at 5474.423 kb on + strand, within AO356_24275 at 5474.831 kb on + strand, within AO356_24275 at 5474.865 kb on - strand, within AO356_24275 at 5474.921 kb on + strand, within AO356_24275 at 5474.921 kb on + strand, within AO356_24275 at 5474.921 kb on + strand, within AO356_24275 at 5474.921 kb on + strand, within AO356_24275 at 5474.921 kb on + strand, within AO356_24275 at 5474.922 kb on - strand, within AO356_24275 at 5474.925 kb on + strand, within AO356_24275 at 5474.925 kb on + strand, within AO356_24275 at 5474.925 kb on + strand, within AO356_24275 at 5474.966 kb on + strand, within AO356_24275 at 5474.966 kb on + strand, within AO356_24275 at 5474.967 kb on - strand, within AO356_24275
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (C) remove 5,470,421 - +0.0 5,470,561 + +0.2 5,471,486 + AO356_24270 0.15 -0.3 5,471,487 - AO356_24270 0.15 -0.3 5,471,487 - AO356_24270 0.15 +0.8 5,471,487 - AO356_24270 0.15 -1.5 5,471,561 + AO356_24270 0.17 +0.7 5,471,562 - AO356_24270 0.17 +0.6 5,471,751 + AO356_24270 0.23 -0.1 5,471,966 + AO356_24270 0.30 +0.6 5,471,966 + AO356_24270 0.30 +0.1 5,471,966 + AO356_24270 0.30 +0.0 5,471,967 - AO356_24270 0.30 +0.5 5,471,967 - AO356_24270 0.30 -0.2 5,471,967 - AO356_24270 0.30 +0.2 5,471,967 - AO356_24270 0.30 -0.0 5,471,967 - AO356_24270 0.30 -1.2 5,472,140 + AO356_24270 0.36 +1.0 5,472,141 - AO356_24270 0.36 -1.0 5,472,336 - AO356_24270 0.42 -0.5 5,472,336 - AO356_24270 0.42 -0.1 5,472,422 + AO356_24270 0.45 -0.0 5,472,423 - AO356_24270 0.45 -1.0 5,472,423 - AO356_24270 0.45 +0.3 5,472,431 + AO356_24270 0.45 -0.6 5,472,591 - AO356_24270 0.51 +1.0 5,472,591 - AO356_24270 0.51 -0.3 5,472,591 - AO356_24270 0.51 +1.0 5,472,591 - AO356_24270 0.51 +0.1 5,472,632 + AO356_24270 0.52 -1.7 5,473,181 + AO356_24270 0.70 -1.6 5,473,181 + AO356_24270 0.70 -1.3 5,473,181 + AO356_24270 0.70 -0.2 5,473,182 - AO356_24270 0.70 -0.5 5,473,184 + AO356_24270 0.70 -0.2 5,473,222 + AO356_24270 0.71 +0.5 5,473,757 + AO356_24270 0.89 +0.9 5,473,757 + AO356_24270 0.89 -0.6 5,473,829 + -0.9 5,474,423 + AO356_24275 0.20 +0.5 5,474,423 + AO356_24275 0.20 -0.9 5,474,831 + AO356_24275 0.59 +0.1 5,474,865 - AO356_24275 0.62 +0.6 5,474,921 + AO356_24275 0.67 -0.7 5,474,921 + AO356_24275 0.67 +0.1 5,474,921 + AO356_24275 0.67 +0.4 5,474,921 + AO356_24275 0.67 -1.5 5,474,921 + AO356_24275 0.67 -0.3 5,474,922 - AO356_24275 0.68 +0.1 5,474,925 + AO356_24275 0.68 +0.3 5,474,925 + AO356_24275 0.68 -1.8 5,474,925 + AO356_24275 0.68 +0.6 5,474,966 + AO356_24275 0.72 -2.8 5,474,966 + AO356_24275 0.72 +1.6 5,474,967 - AO356_24275 0.72 +0.9
Or see this region's nucleotide sequence