Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_16670

Experiment: L-Lysine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine (C)
3,758,823	+				+0.3
3,758,823	+				-0.5
3,758,823	+				-1.1
3,758,823	+				+0.4
3,758,824	-				-0.3
3,758,824	-				-1.8
3,758,824	-				-2.1
3,758,824	-				-1.0
3,758,824	-				-0.7
3,758,861	+				-2.4
3,758,862	-				-0.3
3,758,862	-				-2.0
3,758,880	-				-0.5
3,758,880	-				-0.3
3,758,980	+		AO356_16665	0.10	-0.5
3,758,980	+		AO356_16665	0.10	-0.6
3,758,980	+		AO356_16665	0.10	-0.6
3,758,980	+		AO356_16665	0.10	-0.0
3,758,980	+		AO356_16665	0.10	-1.1
3,758,980	+		AO356_16665	0.10	-0.9
3,758,981	-		AO356_16665	0.11	-2.0
3,758,981	-		AO356_16665	0.11	-1.2
3,758,992	-		AO356_16665	0.12	-0.9
3,759,097	+		AO356_16665	0.23	-0.3
3,759,098	-		AO356_16665	0.23	-0.2
3,759,098	-		AO356_16665	0.23	-1.1
3,759,256	+		AO356_16665	0.41	-0.4
3,759,256	+		AO356_16665	0.41	-1.2
3,759,256	+		AO356_16665	0.41	-2.3
3,759,257	-		AO356_16665	0.41	+0.6
3,759,257	-		AO356_16665	0.41	-2.3
3,759,257	-		AO356_16665	0.41	-3.1
3,759,257	-		AO356_16665	0.41	-1.9
3,759,257	-		AO356_16665	0.41	-0.2
3,759,325	+		AO356_16665	0.48	-1.2
3,759,325	+		AO356_16665	0.48	-2.1
3,759,391	+		AO356_16665	0.55	+0.2
3,759,391	+		AO356_16665	0.55	-0.5
3,759,392	-		AO356_16665	0.55	-0.5
3,759,469	+		AO356_16665	0.64	-2.1
3,759,469	+		AO356_16665	0.64	-2.5
3,759,469	+		AO356_16665	0.64	-0.1
3,759,470	-		AO356_16665	0.64	+1.2
3,759,470	-		AO356_16665	0.64	-1.2
3,759,470	-		AO356_16665	0.64	-1.5
3,759,470	-		AO356_16665	0.64	-0.6
3,759,475	+		AO356_16665	0.64	-1.1
3,759,475	+		AO356_16665	0.64	-1.9
3,759,475	+		AO356_16665	0.64	-1.4
3,759,475	+		AO356_16665	0.64	-0.3
3,759,475	+		AO356_16665	0.64	-0.9
3,759,475	+		AO356_16665	0.64	-0.2
3,759,475	+		AO356_16665	0.64	-0.8
3,759,476	-		AO356_16665	0.64	-1.0
3,759,476	-		AO356_16665	0.64	-0.6
3,759,476	-		AO356_16665	0.64	-0.7
3,759,476	-		AO356_16665	0.64	-1.2
3,759,476	-		AO356_16665	0.64	-1.5
3,759,506	-		AO356_16665	0.68	-0.8
3,759,506	-		AO356_16665	0.68	-0.3
3,759,693	+		AO356_16665	0.88	-1.3
3,759,793	+				-2.2
3,759,794	-				-0.4
3,759,799	+				+1.6
3,759,799	+				-0.4
3,759,800	-				-1.1
3,759,853	+				-1.3
3,759,853	+				-0.0
3,759,854	-				-1.5
3,759,873	+				+0.3
3,759,964	+				-1.2
3,759,964	+				-0.4
3,759,964	+				-1.3
3,759,965	-				-1.3
3,759,965	-				-0.2
3,759,965	-				-0.0
3,759,965	-				-0.2
3,759,965	-				+0.3
3,760,102	+		AO356_16670	0.15	-1.8
3,760,102	+		AO356_16670	0.15	+0.2
3,760,103	-		AO356_16670	0.15	+0.2
3,760,103	-		AO356_16670	0.15	-0.6
3,760,103	-		AO356_16670	0.15	+0.4
3,760,103	-		AO356_16670	0.15	-1.6
3,760,159	+		AO356_16670	0.18	-1.6
3,760,159	+		AO356_16670	0.18	-0.4
3,760,159	+		AO356_16670	0.18	-1.7
3,760,159	+		AO356_16670	0.18	-0.5
3,760,159	+		AO356_16670	0.18	-1.7
3,760,160	-		AO356_16670	0.18	-2.3
3,760,160	-		AO356_16670	0.18	-2.6
3,760,160	-		AO356_16670	0.18	-1.3
3,760,160	-		AO356_16670	0.18	-0.0
3,760,361	-		AO356_16670	0.29	-2.1
3,760,471	+		AO356_16670	0.35	-0.1
3,760,471	+		AO356_16670	0.35	-1.2
3,760,472	-		AO356_16670	0.35	-1.7
3,760,472	-		AO356_16670	0.35	-0.3
3,760,558	+		AO356_16670	0.39	-0.0
3,760,558	+		AO356_16670	0.39	-1.7
3,760,558	+		AO356_16670	0.39	-0.6
3,760,558	+		AO356_16670	0.39	-0.4
3,760,558	+		AO356_16670	0.39	-3.3
3,760,558	+		AO356_16670	0.39	-0.2
3,760,559	-		AO356_16670	0.39	-0.7
3,760,559	-		AO356_16670	0.39	+1.0
3,760,559	-		AO356_16670	0.39	-1.3
3,760,867	+		AO356_16670	0.56	-2.1
3,760,867	+		AO356_16670	0.56	+1.0
3,760,868	-		AO356_16670	0.56	+0.5
3,760,868	-		AO356_16670	0.56	+0.9
3,760,868	-		AO356_16670	0.56	-0.1
3,760,868	-		AO356_16670	0.56	-1.5
3,760,891	+		AO356_16670	0.57	-1.5
3,760,891	+		AO356_16670	0.57	+0.3
3,760,891	+		AO356_16670	0.57	-0.8
3,760,891	+		AO356_16670	0.57	-0.4
3,760,892	-		AO356_16670	0.57	-0.5
3,760,892	-		AO356_16670	0.57	-0.9
3,760,892	-		AO356_16670	0.57	-0.5
3,761,254	+		AO356_16670	0.76	-0.2
3,761,509	+		AO356_16670	0.89	-0.7
3,761,510	-		AO356_16670	0.89	+0.0
3,761,510	-		AO356_16670	0.89	-1.3
3,761,510	-		AO356_16670	0.89	-1.4
3,761,510	-		AO356_16670	0.89	-1.7
3,761,510	-		AO356_16670	0.89	+0.5
3,761,510	-		AO356_16670	0.89	-0.9
3,761,560	+				-1.7
3,761,560	+				-0.3
3,761,560	+				-1.8
3,761,602	+				+0.2
3,761,603	-				-2.1
3,761,707	+				+0.8
3,761,707	+				+0.6
3,761,708	-				-0.1
3,761,708	-				-1.3
3,761,708	-				+0.1
3,761,708	-				+0.9
3,761,708	-				-0.1
3,761,973	-		AO356_16675	0.10	-0.4
3,761,990	+		AO356_16675	0.12	-1.3
3,761,991	-		AO356_16675	0.12	+0.4
3,761,991	-		AO356_16675	0.12	+0.0
3,761,991	-		AO356_16675	0.12	+1.4
3,761,991	-		AO356_16675	0.12	+1.3
3,762,188	+		AO356_16675	0.34	-0.7
3,762,344	+		AO356_16675	0.51	-2.0
3,762,345	-		AO356_16675	0.51	-0.3
3,762,345	-		AO356_16675	0.51	-0.0
3,762,356	+		AO356_16675	0.53	+0.2
3,762,357	-		AO356_16675	0.53	+1.2
3,762,357	-		AO356_16675	0.53	-1.0
3,762,470	+		AO356_16675	0.65	+0.1
3,762,470	+		AO356_16675	0.65	-0.0
3,762,470	+		AO356_16675	0.65	+1.0
3,762,470	+		AO356_16675	0.65	+1.0
3,762,470	+		AO356_16675	0.65	-0.5
3,762,470	+		AO356_16675	0.65	-0.3
3,762,470	+		AO356_16675	0.65	-2.4
3,762,470	+		AO356_16675	0.65	-2.1
3,762,470	+		AO356_16675	0.65	-0.5
3,762,470	+		AO356_16675	0.65	-0.1
3,762,471	-		AO356_16675	0.65	+0.2
3,762,471	-		AO356_16675	0.65	-2.1
3,762,522	-		AO356_16675	0.71	-1.1
3,762,533	+		AO356_16675	0.72	-1.5
3,762,534	-		AO356_16675	0.72	-0.6
3,762,534	-		AO356_16675	0.72	-1.9
3,762,676	+		AO356_16675	0.88	-1.4
3,762,676	+		AO356_16675	0.88	-1.3
3,762,676	+		AO356_16675	0.88	-1.3
3,762,676	+		AO356_16675	0.88	-0.8
3,762,676	+		AO356_16675	0.88	-1.0
3,762,677	-		AO356_16675	0.88	-0.8
3,762,677	-		AO356_16675	0.88	-0.7
3,762,677	-		AO356_16675	0.88	-0.3