Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_12230

Experiment: L-Lysine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine (C)
2,786,023	+		AO356_12220	0.89	+1.5
2,786,024	-		AO356_12220	0.89	+0.7
2,786,202	+				-0.5
2,786,379	+				+1.4
2,786,379	+				+0.4
2,786,379	+				+0.2
2,786,379	+				-0.1
2,786,380	-				-1.0
2,786,380	-				+0.7
2,786,380	-				+1.5
2,786,380	-				+0.8
2,786,380	-				+0.7
2,786,380	-				+0.6
2,786,824	-				+0.0
2,786,892	+				+0.1
2,786,893	-				+0.4
2,786,899	+				+0.1
2,786,937	+				-1.5
2,786,937	+				-0.6
2,786,937	+				+1.5
2,786,937	+				+0.4
2,786,937	+				-1.4
2,786,937	+				+0.4
2,786,938	-				+1.0
2,786,938	-				-0.3
2,786,938	-				+1.0
2,786,938	-				+0.6
2,786,938	-				-0.3
2,786,938	-				+1.6
2,786,938	-				+0.9
2,786,938	-				-0.4
2,786,938	-				+0.7
2,787,111	+				+0.3
2,787,112	-				-0.8
2,787,138	+				+0.9
2,787,138	+				+1.1
2,787,213	+				-1.2
2,787,214	-				+0.1
2,787,214	-				+0.5
2,787,303	+		AO356_12230	0.11	+0.2
2,787,309	+		AO356_12230	0.11	+0.8
2,787,310	-		AO356_12230	0.11	+0.5
2,787,393	+		AO356_12230	0.13	-0.4
2,787,393	+		AO356_12230	0.13	+0.3
2,787,393	+		AO356_12230	0.13	+0.1
2,787,393	+		AO356_12230	0.13	-0.9
2,787,393	+		AO356_12230	0.13	-0.2
2,787,393	+		AO356_12230	0.13	-0.2
2,787,394	-		AO356_12230	0.13	-0.8
2,787,394	-		AO356_12230	0.13	-1.0
2,787,394	-		AO356_12230	0.13	+0.3
2,787,394	-		AO356_12230	0.13	+0.6
2,787,420	+		AO356_12230	0.13	+0.5
2,787,421	-		AO356_12230	0.13	-0.7
2,787,456	+		AO356_12230	0.14	+0.1
2,787,456	+		AO356_12230	0.14	+0.6
2,787,456	+		AO356_12230	0.14	+0.9
2,787,456	+		AO356_12230	0.14	+0.7
2,787,460	-		AO356_12230	0.14	-0.1
2,787,460	-		AO356_12230	0.14	-1.3
2,787,460	-		AO356_12230	0.14	+0.4
2,787,460	-		AO356_12230	0.14	-1.6
2,787,460	-		AO356_12230	0.14	-0.1
2,787,573	+		AO356_12230	0.17	-1.2
2,787,573	+		AO356_12230	0.17	-0.3
2,787,573	+		AO356_12230	0.17	-1.2
2,787,573	+		AO356_12230	0.17	-0.6
2,787,574	-		AO356_12230	0.17	+0.2
2,787,574	-		AO356_12230	0.17	-0.3
2,787,574	-		AO356_12230	0.17	+0.7
2,787,642	+		AO356_12230	0.18	+1.4
2,787,643	-		AO356_12230	0.18	+0.1
2,787,643	-		AO356_12230	0.18	+0.2
2,787,643	-		AO356_12230	0.18	+0.4
2,787,643	-		AO356_12230	0.18	-0.5
2,787,643	-		AO356_12230	0.18	-2.2
2,787,648	+		AO356_12230	0.19	+0.5
2,787,648	+		AO356_12230	0.19	+0.8
2,787,648	+		AO356_12230	0.19	+0.8
2,787,648	+		AO356_12230	0.19	+0.0
2,787,648	+		AO356_12230	0.19	+0.7
2,787,648	+		AO356_12230	0.19	+0.6
2,787,649	-		AO356_12230	0.19	+0.7
2,787,649	-		AO356_12230	0.19	+0.3
2,787,742	-		AO356_12230	0.21	+0.6
2,787,742	-		AO356_12230	0.21	-0.2
2,787,777	+		AO356_12230	0.22	-0.1
2,787,778	-		AO356_12230	0.22	+0.2
2,787,778	-		AO356_12230	0.22	-0.6
2,787,778	-		AO356_12230	0.22	+0.9
2,787,789	-		AO356_12230	0.22	+1.4
2,787,840	+		AO356_12230	0.23	+0.6
2,787,904	-		AO356_12230	0.24	+0.1
2,787,904	-		AO356_12230	0.24	-1.0
2,787,904	-		AO356_12230	0.24	-0.4
2,787,924	+		AO356_12230	0.25	-0.0
2,787,925	-		AO356_12230	0.25	+1.1
2,787,925	-		AO356_12230	0.25	+1.2
2,787,993	+		AO356_12230	0.26	-2.1
2,787,993	+		AO356_12230	0.26	-0.8
2,788,059	+		AO356_12230	0.28	-0.4
2,788,059	+		AO356_12230	0.28	+1.0
2,788,059	+		AO356_12230	0.28	-0.5
2,788,059	+		AO356_12230	0.28	-0.9
2,788,059	+		AO356_12230	0.28	+0.2
2,788,060	-		AO356_12230	0.28	+0.6
2,788,060	-		AO356_12230	0.28	+1.0
2,788,060	-		AO356_12230	0.28	-0.4
2,788,060	-		AO356_12230	0.28	+1.0
2,788,060	-		AO356_12230	0.28	-0.1
2,788,067	+		AO356_12230	0.28	-0.2
2,788,067	+		AO356_12230	0.28	+0.5
2,788,068	-		AO356_12230	0.28	-2.9
2,788,132	-		AO356_12230	0.30	-1.1
2,788,132	-		AO356_12230	0.30	-0.0
2,788,221	+		AO356_12230	0.32	-0.4
2,788,234	+		AO356_12230	0.32	+0.4
2,788,235	-		AO356_12230	0.32	+0.1
2,788,407	+		AO356_12230	0.36	+0.7
2,788,407	+		AO356_12230	0.36	-0.5
2,788,467	+		AO356_12230	0.37	-0.1
2,788,467	+		AO356_12230	0.37	+0.1
2,788,467	+		AO356_12230	0.37	+0.3
2,788,468	-		AO356_12230	0.37	+0.2
2,788,487	+		AO356_12230	0.38	-0.8
2,788,487	+		AO356_12230	0.38	+0.3
2,788,487	+		AO356_12230	0.38	+0.4
2,788,487	+		AO356_12230	0.38	+0.7
2,788,487	+		AO356_12230	0.38	-0.0
2,788,488	-		AO356_12230	0.38	+1.0
2,788,488	-		AO356_12230	0.38	+1.0
2,788,488	-		AO356_12230	0.38	+0.8
2,788,488	-		AO356_12230	0.38	+0.3
2,788,542	+		AO356_12230	0.39	-0.1
2,788,542	+		AO356_12230	0.39	-0.0
2,788,542	+		AO356_12230	0.39	+0.2
2,788,704	+		AO356_12230	0.42	+0.4
2,788,704	+		AO356_12230	0.42	+0.3
2,788,705	-		AO356_12230	0.42	+0.6
2,788,705	-		AO356_12230	0.42	+0.9
2,788,821	+		AO356_12230	0.45	-0.4
2,788,821	+		AO356_12230	0.45	-0.5
2,788,822	-		AO356_12230	0.45	-0.4
2,788,822	-		AO356_12230	0.45	+0.1
2,788,822	-		AO356_12230	0.45	+0.8
2,788,830	+		AO356_12230	0.45	+0.4
2,788,830	+		AO356_12230	0.45	+0.2
2,788,831	-		AO356_12230	0.45	-0.6
2,788,831	-		AO356_12230	0.45	-0.2
2,788,886	+		AO356_12230	0.46	-0.7
2,788,886	+		AO356_12230	0.46	+1.3
2,788,887	-		AO356_12230	0.47	+0.2
2,788,910	-		AO356_12230	0.47	-0.1
2,788,910	-		AO356_12230	0.47	+0.1
2,788,910	-		AO356_12230	0.47	+0.3
2,788,927	+		AO356_12230	0.47	-0.9
2,788,927	+		AO356_12230	0.47	-1.5
2,788,928	-		AO356_12230	0.47	+1.1
2,788,928	-		AO356_12230	0.47	-0.3
2,788,928	-		AO356_12230	0.47	-0.5
2,788,929	+		AO356_12230	0.47	-0.3
2,788,929	+		AO356_12230	0.47	-0.4
2,788,929	+		AO356_12230	0.47	-1.1
2,788,929	+		AO356_12230	0.47	+0.0
2,788,929	+		AO356_12230	0.47	-0.9
2,788,929	+		AO356_12230	0.47	+0.3
2,788,929	+		AO356_12230	0.47	+1.3
2,788,929	+		AO356_12230	0.47	-1.8
2,788,929	+		AO356_12230	0.47	-1.3
2,788,929	+		AO356_12230	0.47	-1.9
2,788,929	+		AO356_12230	0.47	-1.2
2,788,930	-		AO356_12230	0.47	+1.8
2,788,930	-		AO356_12230	0.47	+0.7
2,788,930	-		AO356_12230	0.47	-0.4
2,788,930	-		AO356_12230	0.47	+0.1
2,788,930	-		AO356_12230	0.47	-0.3
2,788,930	-		AO356_12230	0.47	-1.2
2,788,962	+		AO356_12230	0.48	-1.4
2,788,962	+		AO356_12230	0.48	-0.8
2,788,962	+		AO356_12230	0.48	-0.7
2,788,963	-		AO356_12230	0.48	-1.3
2,789,019	+		AO356_12230	0.49	+0.6
2,789,082	+		AO356_12230	0.51	+0.9
2,789,082	+		AO356_12230	0.51	+0.0
2,789,082	+		AO356_12230	0.51	-1.1
2,789,083	-		AO356_12230	0.51	+0.3
2,789,083	-		AO356_12230	0.51	-0.8
2,789,083	-		AO356_12230	0.51	-1.0
2,789,100	+		AO356_12230	0.51	-0.1
2,789,252	-		AO356_12230	0.55	-1.1
2,789,272	-		AO356_12230	0.55	+2.1
2,789,272	-		AO356_12230	0.55	+0.1
2,789,278	-		AO356_12230	0.55	+0.3
2,789,288	-		AO356_12230	0.56	+0.7
2,789,400	+		AO356_12230	0.58	+1.0
2,789,400	+		AO356_12230	0.58	+0.5
2,789,589	+		AO356_12230	0.62	-0.5
2,789,590	-		AO356_12230	0.62	+0.5
2,789,590	-		AO356_12230	0.62	+3.1
2,789,601	+		AO356_12230	0.63	-0.9
2,789,601	+		AO356_12230	0.63	-0.3
2,789,602	-		AO356_12230	0.63	+1.1
2,789,670	+		AO356_12230	0.64	+0.9
2,789,670	+		AO356_12230	0.64	+1.6
2,789,670	+		AO356_12230	0.64	+0.4
2,789,670	+		AO356_12230	0.64	-0.9
2,789,671	-		AO356_12230	0.64	-1.7
2,789,671	-		AO356_12230	0.64	+0.3
2,789,671	-		AO356_12230	0.64	+2.5
2,789,671	-		AO356_12230	0.64	+0.6
2,789,671	-		AO356_12230	0.64	+0.8
2,789,671	-		AO356_12230	0.64	-1.0
2,789,671	-		AO356_12230	0.64	-0.3
2,789,727	+		AO356_12230	0.65	+0.1
2,789,744	+		AO356_12230	0.66	-0.0
2,789,793	+		AO356_12230	0.67	-1.0
2,789,799	+		AO356_12230	0.67	+0.7
2,789,799	+		AO356_12230	0.67	+0.2
2,789,799	+		AO356_12230	0.67	-0.2
2,789,800	-		AO356_12230	0.67	-0.4
2,789,832	+		AO356_12230	0.68	-0.0
2,789,833	-		AO356_12230	0.68	-0.4
2,789,833	-		AO356_12230	0.68	+0.2
2,789,833	-		AO356_12230	0.68	-0.5
2,789,833	-		AO356_12230	0.68	+0.5
2,789,833	-		AO356_12230	0.68	+0.3
2,789,877	+		AO356_12230	0.69	-0.4
2,789,877	+		AO356_12230	0.69	+0.8
2,789,877	+		AO356_12230	0.69	+0.4
2,789,878	-		AO356_12230	0.69	+0.8
2,789,878	-		AO356_12230	0.69	+0.8
2,789,943	+		AO356_12230	0.70	+0.4
2,789,944	-		AO356_12230	0.70	+1.1
2,790,053	+		AO356_12230	0.73	+1.3
2,790,054	-		AO356_12230	0.73	+0.3
2,790,054	-		AO356_12230	0.73	+1.0
2,790,167	-		AO356_12230	0.75	-0.4
2,790,168	+		AO356_12230	0.75	-2.2
2,790,169	-		AO356_12230	0.75	-0.1
2,790,169	-		AO356_12230	0.75	-0.1
2,790,169	-		AO356_12230	0.75	+0.6
2,790,169	-		AO356_12230	0.75	+0.1
2,790,169	-		AO356_12230	0.75	+0.6
2,790,169	-		AO356_12230	0.75	-0.6
2,790,169	-		AO356_12230	0.75	+0.4
2,790,223	-		AO356_12230	0.77	-1.4
2,790,279	+		AO356_12230	0.78	-1.5
2,790,280	-		AO356_12230	0.78	-0.4
2,790,280	-		AO356_12230	0.78	-0.4
2,790,280	-		AO356_12230	0.78	-2.0
2,790,280	-		AO356_12230	0.78	+0.5
2,790,422	-		AO356_12230	0.81	+0.8
2,790,469	+		AO356_12230	0.82	-0.0
2,790,482	-		AO356_12230	0.82	-0.4
2,790,614	+		AO356_12230	0.85	+0.4
2,790,831	+				-0.5
2,790,831	+				-1.0
2,790,832	-				-0.0
2,790,832	-				+0.2
2,790,832	-				+1.6
2,791,004	+				+1.5
2,791,004	+				+1.0
2,791,004	+				+0.7
2,791,004	+				-1.7
2,791,004	+				+1.4
2,791,359	+		AO356_12235	0.20	+1.2
2,791,359	+		AO356_12235	0.20	+0.3
2,791,360	-		AO356_12235	0.20	+1.5
2,791,360	-		AO356_12235	0.20	+0.3
2,791,360	-		AO356_12235	0.20	-1.1
2,791,701	+				-1.0
2,791,701	+				+1.5
2,791,872	+				+1.5
2,791,872	+				-1.3
2,791,872	+				+0.6
2,791,872	+				+0.9
2,791,873	-				+0.4
2,791,873	-				+0.3
2,791,886	+				+0.9
2,791,943	+		AO356_12240	0.11	+0.3
2,791,943	+		AO356_12240	0.11	-0.3
2,791,944	-		AO356_12240	0.11	+0.2
2,791,944	-		AO356_12240	0.11	+0.3
2,791,944	-		AO356_12240	0.11	-0.2
2,791,944	-		AO356_12240	0.11	-1.4
2,791,944	-		AO356_12240	0.11	+0.1
2,791,977	+		AO356_12240	0.13	+0.9
2,791,977	+		AO356_12240	0.13	+1.1
2,792,150	-		AO356_12240	0.22	-0.4
2,792,166	+		AO356_12240	0.23	+1.2
2,792,166	+		AO356_12240	0.23	+0.3
2,792,166	+		AO356_12240	0.23	-0.9
2,792,166	+		AO356_12240	0.23	-0.3
2,792,166	+		AO356_12240	0.23	+0.6
2,792,166	+		AO356_12240	0.23	-0.9
2,792,167	-		AO356_12240	0.23	-0.3
2,792,167	-		AO356_12240	0.23	+0.1
2,792,167	-		AO356_12240	0.23	+1.1
2,792,167	-		AO356_12240	0.23	+0.8
2,792,167	-		AO356_12240	0.23	+0.8
2,792,167	-		AO356_12240	0.23	+1.9
2,792,167	-		AO356_12240	0.23	+0.8