Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_09855

Experiment: L-Lysine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine (C)
2,230,242	+		AO356_09845	0.25	-0.0
2,230,243	-		AO356_09845	0.26	+0.4
2,230,243	-		AO356_09845	0.26	+0.5
2,230,290	+		AO356_09845	0.40	+0.5
2,230,290	+		AO356_09845	0.40	-0.4
2,230,290	+		AO356_09845	0.40	-0.1
2,230,290	+		AO356_09845	0.40	-0.0
2,230,291	-		AO356_09845	0.40	+0.7
2,230,291	-		AO356_09845	0.40	+0.7
2,230,291	-		AO356_09845	0.40	+1.2
2,230,291	-		AO356_09845	0.40	+1.5
2,230,291	-		AO356_09845	0.40	+0.5
2,230,302	+		AO356_09845	0.44	-0.9
2,230,303	-		AO356_09845	0.44	+0.5
2,230,364	+		AO356_09845	0.62	+0.1
2,230,413	+		AO356_09845	0.77	-0.3
2,230,413	+		AO356_09845	0.77	-0.3
2,230,413	+		AO356_09845	0.77	-0.3
2,230,413	+		AO356_09845	0.77	+0.1
2,230,414	-		AO356_09845	0.78	-1.1
2,230,514	+				-0.7
2,230,514	+				-1.7
2,230,514	+				+0.3
2,230,515	-				+0.8
2,230,515	-				-0.4
2,230,519	+				-0.6
2,230,519	+				+0.7
2,230,519	+				+0.4
2,230,519	+				+0.7
2,230,519	+				-1.3
2,230,519	+				-0.1
2,230,519	+				+0.4
2,230,519	+				-0.4
2,230,519	+				-2.0
2,230,519	+				-0.6
2,230,520	-				+0.7
2,230,520	-				+0.6
2,230,520	-				+1.7
2,230,520	-				+0.5
2,230,520	-				+0.2
2,230,520	-				+1.2
2,230,520	-				-2.3
2,230,520	-				+0.0
2,230,824	+		AO356_09850	0.67	-0.8
2,230,915	+		AO356_09850	0.90	+1.2
2,230,915	+		AO356_09850	0.90	+0.4
2,230,915	+		AO356_09850	0.90	-2.5
2,230,915	+		AO356_09850	0.90	+0.8
2,230,916	-				+0.5
2,230,916	-				-0.6
2,230,916	-				-1.1
2,230,916	-				-0.8
2,230,916	-				+0.4
2,230,916	-				+0.3
2,230,916	-				+0.5
2,230,958	+				-1.5
2,230,959	-				+0.8
2,230,959	-				+1.2
2,230,997	+				-1.1
2,230,998	-				+0.7
2,231,004	+				-0.8
2,231,004	+				+0.4
2,231,005	-				+0.4
2,231,005	-				+0.0
2,231,005	-				+0.5
2,231,039	+				+0.4
2,231,039	+				+0.4
2,231,061	+				+0.2
2,231,253	+		AO356_09855	0.29	-0.1
2,231,253	+		AO356_09855	0.29	-2.8
2,231,253	+		AO356_09855	0.29	-2.4
2,231,253	+		AO356_09855	0.29	-2.3
2,231,253	+		AO356_09855	0.29	-2.4
2,231,253	+		AO356_09855	0.29	-0.0
2,231,253	+		AO356_09855	0.29	+0.0
2,231,253	+		AO356_09855	0.29	-1.3
2,231,253	+		AO356_09855	0.29	-0.1
2,231,253	+		AO356_09855	0.29	-3.2
2,231,253	+		AO356_09855	0.29	-1.1
2,231,253	+		AO356_09855	0.29	+1.3
2,231,253	+		AO356_09855	0.29	-0.5
2,231,253	+		AO356_09855	0.29	-1.1
2,231,253	+		AO356_09855	0.29	-0.8
2,231,253	+		AO356_09855	0.29	-0.4
2,231,253	+		AO356_09855	0.29	-2.3
2,231,253	+		AO356_09855	0.29	-1.5
2,231,253	+		AO356_09855	0.29	-0.8
2,231,253	+		AO356_09855	0.29	-0.0
2,231,253	+		AO356_09855	0.29	-0.8
2,231,253	+		AO356_09855	0.29	-0.0
2,231,253	+		AO356_09855	0.29	+0.1
2,231,253	+		AO356_09855	0.29	-0.3
2,231,253	+		AO356_09855	0.29	+0.5
2,231,253	+		AO356_09855	0.29	-1.0
2,231,253	+		AO356_09855	0.29	-3.0
2,231,253	+		AO356_09855	0.29	-1.7
2,231,253	+		AO356_09855	0.29	-0.6
2,231,253	+		AO356_09855	0.29	-1.7
2,231,254	-		AO356_09855	0.29	+1.3
2,231,254	-		AO356_09855	0.29	+0.1
2,231,254	-		AO356_09855	0.29	+0.2
2,231,254	-		AO356_09855	0.29	+2.3
2,231,254	-		AO356_09855	0.29	+0.2
2,231,254	-		AO356_09855	0.29	+1.1
2,231,254	-		AO356_09855	0.29	+1.0
2,231,254	-		AO356_09855	0.29	-0.2
2,231,254	-		AO356_09855	0.29	+0.7
2,231,254	-		AO356_09855	0.29	+0.3
2,231,254	-		AO356_09855	0.29	+0.9
2,231,254	-		AO356_09855	0.29	+0.8
2,231,254	-		AO356_09855	0.29	-0.3
2,231,254	-		AO356_09855	0.29	+0.9
2,231,254	-		AO356_09855	0.29	+0.1
2,231,254	-		AO356_09855	0.29	+1.5
2,231,254	-		AO356_09855	0.29	+1.5
2,231,254	-		AO356_09855	0.29	-0.2
2,231,254	-		AO356_09855	0.29	-0.9
2,231,254	-		AO356_09855	0.29	+1.1
2,231,254	-		AO356_09855	0.29	+0.2
2,231,254	-		AO356_09855	0.29	+1.1
2,231,254	-		AO356_09855	0.29	+0.7
2,231,254	-		AO356_09855	0.29	+1.4
2,231,254	-		AO356_09855	0.29	+0.4
2,231,254	-		AO356_09855	0.29	+1.9
2,231,254	-		AO356_09855	0.29	-2.0
2,231,254	-		AO356_09855	0.29	-0.3
2,231,254	-		AO356_09855	0.29	+1.0
2,231,254	-		AO356_09855	0.29	+0.6
2,231,254	-		AO356_09855	0.29	+1.2
2,231,254	-		AO356_09855	0.29	+2.2
2,231,349	+		AO356_09855	0.58	-0.9
2,231,350	-		AO356_09855	0.58	+0.3
2,231,356	+		AO356_09855	0.60	-2.4
2,231,357	-		AO356_09855	0.61	+1.1
2,231,357	-		AO356_09855	0.61	+0.1
2,231,391	+		AO356_09855	0.71	-0.8
2,231,391	+		AO356_09855	0.71	-1.1
2,231,391	+		AO356_09855	0.71	-2.6
2,231,391	+		AO356_09855	0.71	-0.6
2,231,391	+		AO356_09855	0.71	-2.1
2,231,391	+		AO356_09855	0.71	-2.4
2,231,392	-		AO356_09855	0.71	+1.1
2,231,392	-		AO356_09855	0.71	+0.5
2,231,392	-		AO356_09855	0.71	+0.9
2,231,517	+				-1.1
2,231,533	+				+0.0
2,231,533	+				-1.3
2,231,533	+				-1.6
2,231,534	-				+1.6
2,231,534	-				+0.9
2,231,534	-				+0.2
2,231,534	-				+1.0
2,231,534	-				-0.6
2,231,534	-				+1.0
2,231,534	-				+1.1
2,231,542	+				-1.0
2,231,542	+				-0.9
2,231,542	+				-0.9
2,231,543	-				+0.5
2,231,543	-				-0.0
2,231,579	-				+1.1
2,231,579	-				+0.6
2,231,727	+		AO356_09860	0.23	-0.9
2,231,727	+		AO356_09860	0.23	-0.5
2,231,728	-		AO356_09860	0.23	+1.0
2,231,730	+		AO356_09860	0.24	-0.5
2,231,730	+		AO356_09860	0.24	+0.5
2,231,731	-		AO356_09860	0.24	+1.3
2,231,731	-		AO356_09860	0.24	+1.6
2,231,739	+		AO356_09860	0.25	-0.9
2,231,739	+		AO356_09860	0.25	-0.8
2,231,739	+		AO356_09860	0.25	-0.6
2,231,740	-		AO356_09860	0.25	+0.3
2,231,740	-		AO356_09860	0.25	+0.9
2,231,740	-		AO356_09860	0.25	+1.1
2,231,740	-		AO356_09860	0.25	+0.7
2,231,767	+		AO356_09860	0.30	+0.4
2,231,767	+		AO356_09860	0.30	-1.2
2,231,767	+		AO356_09860	0.30	-2.1
2,231,768	-		AO356_09860	0.30	+3.5
2,231,768	-		AO356_09860	0.30	+1.0
2,231,768	-		AO356_09860	0.30	+1.1
2,231,861	+		AO356_09860	0.45	+0.2
2,231,861	+		AO356_09860	0.45	-0.2
2,231,861	+		AO356_09860	0.45	-0.9
2,231,861	+		AO356_09860	0.45	-0.7
2,231,861	+		AO356_09860	0.45	-1.5
2,231,862	-		AO356_09860	0.46	+0.9
2,231,862	-		AO356_09860	0.46	+1.4
2,231,862	-		AO356_09860	0.46	+1.1
2,231,862	-		AO356_09860	0.46	+1.3
2,231,862	-		AO356_09860	0.46	+0.5
2,231,862	-		AO356_09860	0.46	+1.4
2,231,862	-		AO356_09860	0.46	+1.0
2,231,864	+		AO356_09860	0.46	-1.9
2,231,934	+		AO356_09860	0.57	-1.1
2,231,934	+		AO356_09860	0.57	-0.3
2,231,934	+		AO356_09860	0.57	+0.6
2,231,934	+		AO356_09860	0.57	+0.1
2,231,934	+		AO356_09860	0.57	-1.0
2,231,934	+		AO356_09860	0.57	-1.2
2,231,934	+		AO356_09860	0.57	-1.7
2,231,935	-		AO356_09860	0.58	+1.1
2,231,935	-		AO356_09860	0.58	+0.8
2,231,935	-		AO356_09860	0.58	+1.1
2,232,011	+		AO356_09860	0.70	+0.5
2,232,011	+		AO356_09860	0.70	-1.4
2,232,036	+		AO356_09860	0.74	-2.0
2,232,036	+		AO356_09860	0.74	-1.6
2,232,036	+		AO356_09860	0.74	-0.3
2,232,036	+		AO356_09860	0.74	-1.0
2,232,037	-		AO356_09860	0.74	+2.0
2,232,037	-		AO356_09860	0.74	+1.2
2,232,037	-		AO356_09860	0.74	+1.0
2,232,037	-		AO356_09860	0.74	+0.3
2,232,078	+		AO356_09860	0.81	+0.6
2,232,079	-		AO356_09860	0.81	+1.1
2,232,181	+				-0.9
2,232,181	+				-1.5
2,232,181	+				-0.5
2,232,182	-				+2.9
2,232,182	-				+0.9
2,232,182	-				+1.4
2,232,182	-				-0.4
2,232,187	+				-0.8
2,232,187	+				+0.3
2,232,187	+				+1.5
2,232,187	+				-1.8
2,232,187	+				-0.3
2,232,188	-				+1.8
2,232,188	-				+0.9
2,232,188	-				+1.3
2,232,188	-				+1.9
2,232,285	+				-0.1