Experiment: L-Lysine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_00820 and AO356_00825 are separated by 118 nucleotides
AO356_00820: AO356_00820 - alcohol dehydrogenase, at 185,791 to 186,831
_00820
AO356_00825: AO356_00825 - hypothetical protein, at 186,950 to 187,189
_00825
Position (kb) 186
187
188 Strain fitness (log2 ratio) -2
-1
0
1
2 at 185.997 kb on + strand, within AO356_00820 at 185.997 kb on + strand, within AO356_00820 at 185.998 kb on - strand, within AO356_00820 at 185.998 kb on - strand, within AO356_00820 at 186.075 kb on + strand, within AO356_00820 at 186.075 kb on + strand, within AO356_00820 at 186.076 kb on - strand, within AO356_00820 at 186.099 kb on + strand, within AO356_00820 at 186.099 kb on + strand, within AO356_00820 at 186.100 kb on - strand, within AO356_00820 at 186.144 kb on + strand, within AO356_00820 at 186.144 kb on + strand, within AO356_00820 at 186.145 kb on - strand, within AO356_00820 at 186.470 kb on + strand, within AO356_00820 at 186.471 kb on - strand, within AO356_00820 at 186.471 kb on - strand, within AO356_00820 at 186.471 kb on - strand, within AO356_00820 at 186.471 kb on - strand, within AO356_00820 at 186.721 kb on + strand, within AO356_00820 at 186.721 kb on + strand, within AO356_00820 at 186.816 kb on - strand at 186.934 kb on + strand at 186.934 kb on + strand at 186.935 kb on - strand at 186.935 kb on - strand at 186.935 kb on - strand at 186.951 kb on + strand at 186.952 kb on - strand at 186.952 kb on - strand at 186.952 kb on - strand at 186.953 kb on + strand at 186.953 kb on + strand at 186.954 kb on - strand at 186.959 kb on - strand at 186.973 kb on - strand at 186.990 kb on - strand, within AO356_00825 at 187.025 kb on - strand, within AO356_00825 at 187.091 kb on - strand, within AO356_00825 at 187.092 kb on + strand, within AO356_00825 at 187.093 kb on - strand, within AO356_00825 at 187.093 kb on - strand, within AO356_00825 at 187.149 kb on - strand, within AO356_00825 at 187.149 kb on - strand, within AO356_00825 at 187.184 kb on + strand at 187.191 kb on + strand at 187.191 kb on + strand at 187.192 kb on - strand at 187.192 kb on - strand at 187.192 kb on - strand at 187.200 kb on + strand at 187.201 kb on - strand at 187.212 kb on + strand at 187.310 kb on + strand at 187.311 kb on - strand at 187.319 kb on + strand at 187.320 kb on - strand at 187.389 kb on - strand at 187.492 kb on + strand at 187.492 kb on + strand at 187.493 kb on - strand at 187.575 kb on + strand at 187.575 kb on + strand at 187.576 kb on - strand at 187.576 kb on - strand at 187.576 kb on - strand at 187.576 kb on - strand at 187.579 kb on + strand at 187.579 kb on + strand at 187.579 kb on + strand at 187.579 kb on + strand at 187.579 kb on + strand at 187.580 kb on - strand at 187.580 kb on - strand at 187.580 kb on - strand at 187.580 kb on - strand at 187.638 kb on + strand at 187.638 kb on + strand at 187.639 kb on - strand at 187.748 kb on - strand at 187.767 kb on + strand at 187.767 kb on + strand at 187.768 kb on - strand at 187.768 kb on - strand at 187.771 kb on + strand at 187.772 kb on - strand at 187.772 kb on - strand at 187.772 kb on - strand at 187.772 kb on - strand at 187.774 kb on + strand at 187.775 kb on - strand at 187.776 kb on + strand at 187.776 kb on + strand at 187.776 kb on + strand at 187.777 kb on - strand at 187.777 kb on - strand at 187.810 kb on + strand at 187.877 kb on - strand at 187.984 kb on + strand at 187.997 kb on - strand at 188.000 kb on - strand at 188.000 kb on - strand at 188.004 kb on + strand at 188.091 kb on - strand at 188.096 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (C) remove 185,997 + AO356_00820 0.20 +0.3 185,997 + AO356_00820 0.20 +1.4 185,998 - AO356_00820 0.20 -1.1 185,998 - AO356_00820 0.20 -0.7 186,075 + AO356_00820 0.27 +0.3 186,075 + AO356_00820 0.27 +2.2 186,076 - AO356_00820 0.27 +0.5 186,099 + AO356_00820 0.30 -0.3 186,099 + AO356_00820 0.30 -2.4 186,100 - AO356_00820 0.30 +0.1 186,144 + AO356_00820 0.34 -0.6 186,144 + AO356_00820 0.34 +0.9 186,145 - AO356_00820 0.34 +1.1 186,470 + AO356_00820 0.65 +0.6 186,471 - AO356_00820 0.65 -0.5 186,471 - AO356_00820 0.65 +0.7 186,471 - AO356_00820 0.65 -1.0 186,471 - AO356_00820 0.65 +0.2 186,721 + AO356_00820 0.89 +0.9 186,721 + AO356_00820 0.89 -2.1 186,816 - +0.9 186,934 + +0.2 186,934 + -0.1 186,935 - -0.1 186,935 - -0.5 186,935 - +0.4 186,951 + +1.5 186,952 - -0.4 186,952 - -0.1 186,952 - +0.9 186,953 + -0.0 186,953 + +1.4 186,954 - +0.2 186,959 - +0.3 186,973 - +0.2 186,990 - AO356_00825 0.17 +0.5 187,025 - AO356_00825 0.31 -0.6 187,091 - AO356_00825 0.59 -0.9 187,092 + AO356_00825 0.59 +0.3 187,093 - AO356_00825 0.60 +0.1 187,093 - AO356_00825 0.60 +1.1 187,149 - AO356_00825 0.83 +0.3 187,149 - AO356_00825 0.83 -2.5 187,184 + -1.9 187,191 + +1.4 187,191 + +1.0 187,192 - -0.4 187,192 - +0.2 187,192 - +0.1 187,200 + -0.4 187,201 - +0.1 187,212 + +1.0 187,310 + +0.9 187,311 - -0.6 187,319 + -1.3 187,320 - +0.4 187,389 - -1.8 187,492 + -0.6 187,492 + -0.5 187,493 - +1.2 187,575 + +1.1 187,575 + +0.9 187,576 - +0.4 187,576 - -0.5 187,576 - -0.1 187,576 - +0.4 187,579 + +0.8 187,579 + +1.8 187,579 + -0.4 187,579 + +0.1 187,579 + +0.4 187,580 - +0.4 187,580 - -1.4 187,580 - -0.6 187,580 - +0.4 187,638 + +1.3 187,638 + -2.2 187,639 - -0.1 187,748 - +0.6 187,767 + +1.5 187,767 + -1.3 187,768 - -0.8 187,768 - -0.4 187,771 + +0.7 187,772 - -0.8 187,772 - -1.7 187,772 - -1.2 187,772 - +0.2 187,774 + +0.5 187,775 - -0.7 187,776 + +0.4 187,776 + -1.1 187,776 + -0.2 187,777 - +0.3 187,777 - +0.6 187,810 + -1.4 187,877 - -0.5 187,984 + -1.0 187,997 - +0.5 188,000 - +1.4 188,000 - -2.2 188,004 + +0.4 188,091 - +0.5 188,096 + -0.4
Or see this region's nucleotide sequence