Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14490

Experiment: L-Valine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (N)
3,115,290	+		RR42_RS14485	0.53	+0.4
3,115,291	-		RR42_RS14485	0.53	+0.0
3,115,291	-		RR42_RS14485	0.53	+0.5
3,115,291	-		RR42_RS14485	0.53	-0.7
3,115,291	-		RR42_RS14485	0.53	-0.3
3,115,298	-		RR42_RS14485	0.54	+0.3
3,115,298	-		RR42_RS14485	0.54	-0.4
3,115,298	-		RR42_RS14485	0.54	+0.0
3,115,298	-		RR42_RS14485	0.54	-0.5
3,115,298	-		RR42_RS14485	0.54	+0.3
3,115,336	-		RR42_RS14485	0.56	+0.2
3,115,336	-		RR42_RS14485	0.56	-0.3
3,115,344	+		RR42_RS14485	0.57	+0.2
3,115,344	+		RR42_RS14485	0.57	+0.1
3,115,344	+		RR42_RS14485	0.57	+0.3
3,115,344	+		RR42_RS14485	0.57	-0.1
3,115,344	+		RR42_RS14485	0.57	+0.2
3,115,345	-		RR42_RS14485	0.57	-0.8
3,115,345	-		RR42_RS14485	0.57	+0.3
3,115,345	-		RR42_RS14485	0.57	-1.9
3,115,345	-		RR42_RS14485	0.57	-0.8
3,115,345	-		RR42_RS14485	0.57	-0.2
3,115,345	-		RR42_RS14485	0.57	-0.4
3,115,567	-		RR42_RS14485	0.72	-0.5
3,115,567	-		RR42_RS14485	0.72	-0.3
3,115,567	-		RR42_RS14485	0.72	-0.1
3,115,567	-		RR42_RS14485	0.72	+2.0
3,115,567	-		RR42_RS14485	0.72	+0.7
3,115,614	+		RR42_RS14485	0.75	+1.2
3,115,614	+		RR42_RS14485	0.75	-0.4
3,115,614	+		RR42_RS14485	0.75	-0.0
3,115,615	-		RR42_RS14485	0.75	-1.4
3,115,615	-		RR42_RS14485	0.75	-0.1
3,115,627	+		RR42_RS14485	0.76	+0.1
3,115,746	-		RR42_RS14485	0.85	-0.7
3,115,947	+				-0.4
3,115,947	+				-1.0
3,115,948	-				-0.1
3,115,948	-				-0.1
3,115,948	-				-0.5
3,115,959	+				+0.7
3,115,960	-				+1.2
3,115,960	-				+0.6
3,116,065	-				+0.1
3,116,082	+				-0.3
3,116,083	-				+1.0
3,116,083	-				+0.3
3,116,092	+				-1.0
3,116,144	+				+0.6
3,116,218	-				+0.8
3,116,227	-				-0.1
3,116,265	+				+0.2
3,116,265	+				-0.4
3,116,289	+				-0.8
3,116,290	-				-1.4
3,116,290	-				-1.4
3,116,338	+				+1.1
3,116,338	+				-0.3
3,116,366	+				-1.0
3,116,366	+				-0.6
3,116,367	-				-0.1
3,116,367	-				-0.0
3,116,744	-		RR42_RS14490	0.17	-0.1
3,116,744	-		RR42_RS14490	0.17	-0.1
3,116,778	+		RR42_RS14490	0.19	+0.2
3,116,778	+		RR42_RS14490	0.19	-1.4
3,116,778	+		RR42_RS14490	0.19	-0.6
3,116,869	+		RR42_RS14490	0.22	-0.9
3,116,869	+		RR42_RS14490	0.22	+0.1
3,116,870	-		RR42_RS14490	0.22	-0.1
3,117,239	-		RR42_RS14490	0.36	+0.2
3,117,289	+		RR42_RS14490	0.38	+0.0
3,117,290	-		RR42_RS14490	0.38	-0.4
3,117,340	+		RR42_RS14490	0.39	-0.1
3,117,514	+		RR42_RS14490	0.46	-0.3
3,117,514	+		RR42_RS14490	0.46	+0.2
3,117,514	+		RR42_RS14490	0.46	-0.3
3,117,514	+		RR42_RS14490	0.46	-0.1
3,117,515	-		RR42_RS14490	0.46	+0.0
3,117,515	-		RR42_RS14490	0.46	-1.7
3,117,515	-		RR42_RS14490	0.46	-0.3
3,117,666	+		RR42_RS14490	0.52	-1.3
3,117,667	-		RR42_RS14490	0.52	-0.6
3,117,710	-		RR42_RS14490	0.53	+0.2
3,117,710	-		RR42_RS14490	0.53	-0.1
3,117,736	+		RR42_RS14490	0.54	-0.0
3,117,737	-		RR42_RS14490	0.54	+0.2
3,117,770	-		RR42_RS14490	0.55	+0.4
3,117,861	-		RR42_RS14490	0.59	-0.3
3,117,946	+		RR42_RS14490	0.62	+0.2
3,117,946	+		RR42_RS14490	0.62	+1.4
3,117,947	-		RR42_RS14490	0.62	-0.4
3,118,021	+		RR42_RS14490	0.65	+0.1
3,118,073	-		RR42_RS14490	0.67	+0.2
3,118,105	+		RR42_RS14490	0.68	+1.8
3,118,106	-		RR42_RS14490	0.68	-0.5
3,118,106	-		RR42_RS14490	0.68	+0.3
3,118,169	-		RR42_RS14490	0.70	-0.2
3,118,169	-		RR42_RS14490	0.70	-0.5
3,118,189	+		RR42_RS14490	0.71	-0.7
3,118,189	+		RR42_RS14490	0.71	+0.2
3,118,189	+		RR42_RS14490	0.71	-0.4
3,118,189	+		RR42_RS14490	0.71	+1.3
3,118,190	+		RR42_RS14490	0.71	+0.3
3,118,190	-		RR42_RS14490	0.71	-0.8
3,118,190	-		RR42_RS14490	0.71	+0.7
3,118,190	-		RR42_RS14490	0.71	+0.1
3,118,190	-		RR42_RS14490	0.71	+0.1
3,118,190	-		RR42_RS14490	0.71	-0.0
3,118,190	-		RR42_RS14490	0.71	+0.5
3,118,190	-		RR42_RS14490	0.71	-0.3
3,118,190	-		RR42_RS14490	0.71	+0.8
3,118,190	-		RR42_RS14490	0.71	-0.2
3,118,190	-		RR42_RS14490	0.71	+0.5
3,118,351	+		RR42_RS14490	0.77	-0.6
3,118,351	+		RR42_RS14490	0.77	+0.3
3,118,352	-		RR42_RS14490	0.77	+0.2
3,118,394	-		RR42_RS14490	0.78	-1.2
3,118,546	+		RR42_RS14490	0.84	+0.4
3,118,564	+		RR42_RS14490	0.85	-0.3
3,118,564	+		RR42_RS14490	0.85	+0.5
3,118,564	+		RR42_RS14490	0.85	-0.4
3,118,564	+		RR42_RS14490	0.85	-0.2
3,118,564	+		RR42_RS14490	0.85	+0.1
3,118,564	+		RR42_RS14490	0.85	-1.6
3,118,565	-		RR42_RS14490	0.85	-0.2
3,118,565	-		RR42_RS14490	0.85	-0.7
3,118,565	-		RR42_RS14490	0.85	+0.2
3,118,565	-		RR42_RS14490	0.85	+0.4
3,118,565	-		RR42_RS14490	0.85	-1.0
3,118,610	-		RR42_RS14490	0.86	-0.4
3,118,921	+				-0.6
3,118,921	+				+0.2
3,118,924	+				-0.4
3,118,925	-				-0.4
3,119,143	-				-0.4
3,119,299	+				+0.1
3,119,299	+				+1.2
3,119,299	+				+0.2
3,119,299	+				+0.2
3,119,300	-				-0.4
3,119,300	-				-0.6
3,119,300	-				-1.6
3,119,300	-				+0.5
3,119,300	-				+1.2
3,119,300	-				+0.1
3,119,300	-				+0.8
3,119,300	-				-0.2
3,119,301	+				-0.1
3,119,301	+				+2.0
3,119,301	+				+0.2
3,119,301	+				-0.5
3,119,301	+				-0.5
3,119,301	+				+0.0
3,119,302	-				-0.1
3,119,302	-				+0.4
3,119,302	-				-1.0
3,119,302	-				+0.6
3,119,302	-				+0.2
3,119,302	-				-0.3
3,119,445	+				-1.2
3,119,446	-				-0.6
3,119,491	+				+0.3
3,119,491	+				-0.2
3,119,491	+				+0.2
3,119,497	-				+0.4
3,119,530	-				+0.5
3,119,816	-		RR42_RS14495	0.24	+0.6
3,119,816	-		RR42_RS14495	0.24	-0.6
3,119,965	+		RR42_RS14495	0.36	-0.2
3,119,971	+		RR42_RS14495	0.37	-1.6
3,119,971	+		RR42_RS14495	0.37	-0.1
3,119,972	-		RR42_RS14495	0.37	+0.7
3,119,972	-		RR42_RS14495	0.37	-0.4