Experiment: L-Valine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS02670 and RR42_RS02675 are separated by 19 nucleotides RR42_RS02675 and RR42_RS02680 are separated by 116 nucleotides RR42_RS02680 and RR42_RS02685 are separated by 89 nucleotides
RR42_RS02670: RR42_RS02670 - tyrosyl-tRNA synthetase, at 596,870 to 598,111
_RS02670
RR42_RS02675: RR42_RS02675 - D-tyrosyl-tRNA(Tyr) deacylase, at 598,131 to 598,631
_RS02675
RR42_RS02680: RR42_RS02680 - phospholipid-binding protein, at 598,748 to 599,407
_RS02680
RR42_RS02685: RR42_RS02685 - phosphoglycerate mutase, at 599,497 to 600,171
_RS02685
Position (kb) 598
599 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 598.461 kb on + strand, within RR42_RS02675 at 598.462 kb on - strand, within RR42_RS02675 at 598.462 kb on - strand, within RR42_RS02675 at 598.462 kb on - strand, within RR42_RS02675 at 598.613 kb on - strand at 598.659 kb on + strand at 598.659 kb on + strand at 598.660 kb on - strand at 599.018 kb on - strand, within RR42_RS02680 at 599.018 kb on - strand, within RR42_RS02680 at 599.147 kb on + strand, within RR42_RS02680 at 599.189 kb on + strand, within RR42_RS02680 at 599.190 kb on - strand, within RR42_RS02680 at 599.190 kb on - strand, within RR42_RS02680 at 599.190 kb on - strand, within RR42_RS02680 at 599.193 kb on - strand, within RR42_RS02680 at 599.243 kb on + strand, within RR42_RS02680 at 599.243 kb on + strand, within RR42_RS02680 at 599.244 kb on - strand, within RR42_RS02680 at 599.244 kb on - strand, within RR42_RS02680 at 599.244 kb on - strand, within RR42_RS02680 at 599.286 kb on + strand, within RR42_RS02680 at 599.366 kb on + strand at 599.366 kb on + strand at 599.366 kb on + strand at 599.366 kb on + strand at 599.367 kb on - strand at 599.367 kb on - strand at 599.367 kb on - strand at 599.367 kb on - strand at 599.367 kb on - strand at 599.367 kb on - strand at 599.367 kb on - strand at 599.405 kb on + strand at 599.405 kb on + strand at 599.406 kb on - strand at 599.466 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Valine (N) remove 598,461 + RR42_RS02675 0.66 -0.3 598,462 - RR42_RS02675 0.66 -0.6 598,462 - RR42_RS02675 0.66 -0.4 598,462 - RR42_RS02675 0.66 -1.1 598,613 - +0.1 598,659 + +0.3 598,659 + +1.3 598,660 - +2.4 599,018 - RR42_RS02680 0.41 +0.1 599,018 - RR42_RS02680 0.41 +2.3 599,147 + RR42_RS02680 0.60 +1.3 599,189 + RR42_RS02680 0.67 -1.0 599,190 - RR42_RS02680 0.67 +0.1 599,190 - RR42_RS02680 0.67 -0.7 599,190 - RR42_RS02680 0.67 -0.7 599,193 - RR42_RS02680 0.67 -0.1 599,243 + RR42_RS02680 0.75 -0.1 599,243 + RR42_RS02680 0.75 +0.3 599,244 - RR42_RS02680 0.75 -2.4 599,244 - RR42_RS02680 0.75 +1.6 599,244 - RR42_RS02680 0.75 -1.5 599,286 + RR42_RS02680 0.82 -1.0 599,366 + +2.9 599,366 + -1.5 599,366 + -0.1 599,366 + -0.3 599,367 - +2.9 599,367 - +0.2 599,367 - -0.1 599,367 - +0.7 599,367 - -0.5 599,367 - +0.5 599,367 - -0.1 599,405 + -2.2 599,405 + -0.7 599,406 - +0.4 599,466 - -1.1
Or see this region's nucleotide sequence