Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3647

Experiment: Chloramphenicol 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0005 mg/ml
3,762,044	+		Ga0059261_3645	0.79	+0.5
3,762,044	+		Ga0059261_3645	0.79	-0.7
3,762,044	+		Ga0059261_3645	0.79	-0.9
3,762,045	-		Ga0059261_3645	0.79	-0.6
3,762,045	-		Ga0059261_3645	0.79	+1.5
3,762,045	-		Ga0059261_3645	0.79	-0.3
3,762,210	+				-0.1
3,762,210	+				-0.3
3,762,210	+				-1.0
3,762,210	+				-0.2
3,762,210	+				-0.3
3,762,211	-				+0.7
3,762,211	-				-0.5
3,762,211	-				+0.9
3,762,211	-				+1.1
3,762,211	-				+0.2
3,762,211	-				+0.3
3,762,211	-				+0.2
3,762,211	-				+0.8
3,762,211	-				-0.5
3,762,279	+				-0.1
3,762,279	+				-0.1
3,762,280	-				-0.5
3,762,288	+				+0.9
3,762,289	-				+0.4
3,762,289	-				-0.5
3,762,289	-				+0.4
3,762,380	+				-0.2
3,762,380	+				+0.1
3,762,380	+				+0.1
3,762,380	+				+0.4
3,762,380	+				+2.5
3,762,381	-				-0.4
3,762,473	+				+0.0
3,762,474	-				-0.9
3,762,474	-				+0.1
3,762,559	-		Ga0059261_3646	0.24	+0.1
3,762,771	+		Ga0059261_3646	0.67	-0.1
3,762,771	+		Ga0059261_3646	0.67	+0.1
3,762,771	+		Ga0059261_3646	0.67	+0.1
3,762,772	-		Ga0059261_3646	0.68	-2.0
3,762,904	-				+0.8
3,762,904	-				+0.0
3,762,949	+				+0.1
3,762,949	+				-0.2
3,762,949	+				-0.7
3,762,949	+				+0.4
3,762,949	+				+0.3
3,762,950	-				-0.1
3,762,950	-				+0.8
3,762,950	-				-0.4
3,762,950	-				-0.0
3,763,047	+				-1.0
3,763,047	+				-0.5
3,763,047	+				+0.5
3,763,048	-				-0.4
3,763,048	-				+0.5
3,763,048	-				+0.6
3,763,048	-				-0.0
3,763,048	-				-0.4
3,763,048	-				-0.1
3,763,048	-				+0.3
3,763,048	-				+0.2
3,763,048	-				+0.0
3,763,048	-				+0.4
3,763,048	-				+0.1
3,763,229	-		Ga0059261_3647	0.25	+0.7
3,763,231	+		Ga0059261_3647	0.25	-2.2
3,763,231	+		Ga0059261_3647	0.25	-0.2
3,763,231	+		Ga0059261_3647	0.25	+0.0
3,763,231	+		Ga0059261_3647	0.25	+0.8
3,763,231	+		Ga0059261_3647	0.25	-0.2
3,763,231	+		Ga0059261_3647	0.25	+0.4
3,763,231	+		Ga0059261_3647	0.25	-2.0
3,763,231	+		Ga0059261_3647	0.25	+0.5
3,763,232	-		Ga0059261_3647	0.25	+0.2
3,763,232	-		Ga0059261_3647	0.25	-0.2
3,763,232	-		Ga0059261_3647	0.25	-0.2
3,763,299	+		Ga0059261_3647	0.33	-0.8
3,763,299	+		Ga0059261_3647	0.33	+0.4
3,763,299	+		Ga0059261_3647	0.33	+0.7
3,763,300	-		Ga0059261_3647	0.33	+0.6
3,763,449	+		Ga0059261_3647	0.49	+0.3
3,763,449	+		Ga0059261_3647	0.49	+0.3
3,763,450	-		Ga0059261_3647	0.50	-0.2
3,763,450	-		Ga0059261_3647	0.50	+0.6
3,763,450	-		Ga0059261_3647	0.50	+0.9
3,763,701	+		Ga0059261_3647	0.78	-0.2
3,763,701	+		Ga0059261_3647	0.78	-1.9
3,763,702	-		Ga0059261_3647	0.78	+0.0
3,763,702	-		Ga0059261_3647	0.78	+0.2
3,763,719	+		Ga0059261_3647	0.80	-0.9
3,763,763	+		Ga0059261_3647	0.85	+1.1
3,763,803	-		Ga0059261_3647	0.89	+0.9
3,763,803	-		Ga0059261_3647	0.89	-0.0
3,764,003	+				-1.2
3,764,004	-				+0.5
3,764,004	-				+0.8
3,764,046	+				-0.1
3,764,046	+				-1.7
3,764,080	+				-0.4
3,764,080	+				-0.1
3,764,133	+				-0.1
3,764,134	-				-0.7
3,764,235	+				+0.4
3,764,235	+				-0.5
3,764,238	+				-0.9
3,764,239	-				-2.0
3,764,239	-				-0.5
3,764,313	+		Ga0059261_3648	0.17	+1.1
3,764,313	+		Ga0059261_3648	0.17	+1.2
3,764,313	+		Ga0059261_3648	0.17	-0.6
3,764,313	+		Ga0059261_3648	0.17	+0.1
3,764,313	+		Ga0059261_3648	0.17	+0.2
3,764,314	-		Ga0059261_3648	0.17	-1.3
3,764,314	-		Ga0059261_3648	0.17	-0.6
3,764,315	+		Ga0059261_3648	0.18	+0.3
3,764,315	+		Ga0059261_3648	0.18	-0.4
3,764,315	+		Ga0059261_3648	0.18	+0.1
3,764,315	+		Ga0059261_3648	0.18	+0.9
3,764,315	+		Ga0059261_3648	0.18	+0.6
3,764,315	+		Ga0059261_3648	0.18	+0.1
3,764,315	+		Ga0059261_3648	0.18	+0.2
3,764,315	+		Ga0059261_3648	0.18	+0.3
3,764,316	-		Ga0059261_3648	0.18	-0.4
3,764,316	-		Ga0059261_3648	0.18	+0.0
3,764,316	-		Ga0059261_3648	0.18	-0.6
3,764,316	-		Ga0059261_3648	0.18	+0.5
3,764,316	-		Ga0059261_3648	0.18	-0.5
3,764,316	-		Ga0059261_3648	0.18	+0.4
3,764,316	-		Ga0059261_3648	0.18	-1.1
3,764,316	-		Ga0059261_3648	0.18	-0.9
3,764,316	-		Ga0059261_3648	0.18	+0.8
3,764,316	-		Ga0059261_3648	0.18	-0.0
3,764,316	-		Ga0059261_3648	0.18	-1.2
3,764,377	+		Ga0059261_3648	0.24	+0.3
3,764,377	+		Ga0059261_3648	0.24	-1.3
3,764,377	+		Ga0059261_3648	0.24	-0.9
3,764,377	+		Ga0059261_3648	0.24	-0.5
3,764,377	+		Ga0059261_3648	0.24	+0.3
3,764,378	-		Ga0059261_3648	0.25	-0.5
3,764,445	+		Ga0059261_3648	0.32	+0.8
3,764,445	+		Ga0059261_3648	0.32	+0.6
3,764,446	-		Ga0059261_3648	0.32	+0.5
3,764,501	+		Ga0059261_3648	0.38	-0.1
3,764,501	+		Ga0059261_3648	0.38	+0.4
3,764,502	-		Ga0059261_3648	0.38	-0.2
3,764,502	-		Ga0059261_3648	0.38	-0.2
3,764,502	-		Ga0059261_3648	0.38	+0.2
3,764,519	+		Ga0059261_3648	0.40	-0.5
3,764,519	+		Ga0059261_3648	0.40	-1.3
3,764,520	-		Ga0059261_3648	0.40	-2.9
3,764,520	-		Ga0059261_3648	0.40	-0.3
3,764,520	-		Ga0059261_3648	0.40	+0.5
3,764,520	-		Ga0059261_3648	0.40	-0.1
3,764,520	-		Ga0059261_3648	0.40	-1.0
3,764,520	-		Ga0059261_3648	0.40	+0.5
3,764,564	+		Ga0059261_3648	0.45	-1.1
3,764,564	+		Ga0059261_3648	0.45	-1.0
3,764,564	+		Ga0059261_3648	0.45	+0.4
3,764,564	+		Ga0059261_3648	0.45	-0.9
3,764,564	+		Ga0059261_3648	0.45	+0.5
3,764,564	+		Ga0059261_3648	0.45	+0.5
3,764,565	-		Ga0059261_3648	0.45	-1.0
3,764,565	-		Ga0059261_3648	0.45	-0.2
3,764,565	-		Ga0059261_3648	0.45	-0.1
3,764,565	-		Ga0059261_3648	0.45	+1.1
3,764,589	-		Ga0059261_3648	0.48	+0.1
3,764,589	-		Ga0059261_3648	0.48	+0.1
3,764,627	+		Ga0059261_3648	0.52	+0.0
3,764,628	-		Ga0059261_3648	0.52	+0.7
3,764,628	-		Ga0059261_3648	0.52	-1.5
3,764,828	+		Ga0059261_3648	0.75	+0.4
3,764,828	+		Ga0059261_3648	0.75	+0.5
3,764,828	+		Ga0059261_3648	0.75	-0.3
3,764,829	-		Ga0059261_3648	0.75	-0.8