Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3445

Experiment: Chloramphenicol 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0005 mg/ml
3,568,350	+				+0.1
3,568,351	-				+0.2
3,568,351	-				+0.1
3,568,550	+		Ga0059261_3443	0.74	-0.2
3,568,550	+		Ga0059261_3443	0.74	+1.0
3,568,550	+		Ga0059261_3443	0.74	-0.2
3,568,550	+		Ga0059261_3443	0.74	+0.8
3,568,550	+		Ga0059261_3443	0.74	+0.2
3,568,550	+		Ga0059261_3443	0.74	+0.5
3,568,550	+				-0.6
3,568,550	+		Ga0059261_3443	0.74	-0.0
3,568,551	-		Ga0059261_3443	0.75	-1.2
3,568,551	-		Ga0059261_3443	0.75	-1.1
3,568,551	-		Ga0059261_3443	0.75	-0.9
3,568,551	-		Ga0059261_3443	0.75	+0.2
3,568,551	-		Ga0059261_3443	0.75	+0.2
3,568,575	+		Ga0059261_3443	0.86	+0.8
3,568,575	+		Ga0059261_3443	0.86	-0.4
3,568,575	+		Ga0059261_3443	0.86	+0.1
3,568,576	-				-0.8
3,568,643	+				+0.1
3,568,768	+		Ga0059261_3444	0.20	-0.9
3,568,768	+		Ga0059261_3444	0.20	-0.2
3,568,768	+		Ga0059261_3444	0.20	-0.3
3,568,769	-		Ga0059261_3444	0.20	-0.1
3,568,769	-		Ga0059261_3444	0.20	-0.9
3,568,769	-		Ga0059261_3444	0.20	+0.6
3,568,769	-		Ga0059261_3444	0.20	+0.2
3,568,769	-		Ga0059261_3444	0.20	-0.5
3,568,769	-		Ga0059261_3444	0.20	-1.2
3,568,840	+		Ga0059261_3444	0.31	-0.1
3,568,840	+		Ga0059261_3444	0.31	-0.6
3,568,841	-		Ga0059261_3444	0.31	-0.3
3,568,841	-		Ga0059261_3444	0.31	+0.2
3,568,841	-		Ga0059261_3444	0.31	-1.6
3,568,891	+				-0.4
3,568,891	+		Ga0059261_3444	0.38	+0.9
3,568,891	+		Ga0059261_3444	0.38	+0.2
3,568,891	+		Ga0059261_3444	0.38	-0.9
3,568,892	-		Ga0059261_3444	0.38	+0.2
3,569,050	+		Ga0059261_3444	0.61	-0.1
3,569,050	+		Ga0059261_3444	0.61	-0.5
3,569,050	+		Ga0059261_3444	0.61	+0.0
3,569,050	+		Ga0059261_3444	0.61	+1.0
3,569,050	+		Ga0059261_3444	0.61	-1.3
3,569,051	-		Ga0059261_3444	0.61	-0.5
3,569,051	-		Ga0059261_3444	0.61	+0.8
3,569,051	-		Ga0059261_3444	0.61	-0.4
3,569,104	+		Ga0059261_3444	0.69	-0.1
3,569,104	+		Ga0059261_3444	0.69	-0.2
3,569,105	-		Ga0059261_3444	0.69	+0.0
3,569,105	-		Ga0059261_3444	0.69	-0.2
3,569,105	-		Ga0059261_3444	0.69	+0.6
3,569,111	-		Ga0059261_3444	0.70	-0.7
3,569,111	-		Ga0059261_3444	0.70	-1.5
3,569,111	-		Ga0059261_3444	0.70	+0.5
3,569,197	+		Ga0059261_3444	0.82	+0.2
3,569,197	+		Ga0059261_3444	0.82	+0.2
3,569,197	+		Ga0059261_3444	0.82	+1.1
3,569,197	+		Ga0059261_3444	0.82	+0.8
3,569,197	+		Ga0059261_3444	0.82	+0.0
3,569,198	-		Ga0059261_3444	0.82	+0.7
3,569,198	-		Ga0059261_3444	0.82	+0.1
3,569,198	-		Ga0059261_3444	0.82	-0.6
3,569,198	-		Ga0059261_3444	0.82	-0.3
3,569,198	-		Ga0059261_3444	0.82	-0.5
3,569,198	-		Ga0059261_3444	0.82	-0.6
3,569,198	-		Ga0059261_3444	0.82	-1.7
3,569,198	-		Ga0059261_3444	0.82	+0.2
3,569,206	+		Ga0059261_3444	0.83	+0.8
3,569,206	+		Ga0059261_3444	0.83	+0.7
3,569,206	+		Ga0059261_3444	0.83	-0.9
3,569,206	+		Ga0059261_3444	0.83	-0.4
3,569,207	-		Ga0059261_3444	0.83	+0.1
3,569,207	-		Ga0059261_3444	0.83	-1.2
3,569,207	-		Ga0059261_3444	0.83	+0.7
3,569,317	+				+0.1
3,569,317	+				+0.2
3,569,317	+				+1.2
3,569,318	-				-0.5
3,569,318	-				+0.1
3,569,372	+				+0.1
3,569,374	+				+0.2
3,569,374	+				-0.1
3,569,374	+				+0.2
3,569,375	-				+0.5
3,569,375	-				-0.6
3,569,375	-				-0.7
3,569,375	-				-1.2
3,569,604	+		Ga0059261_3445	0.18	-0.1
3,569,842	+		Ga0059261_3445	0.34	-0.1
3,569,842	+		Ga0059261_3445	0.34	+0.2
3,569,843	-		Ga0059261_3445	0.34	+1.0
3,569,843	-				+0.6
3,569,924	+		Ga0059261_3445	0.40	+0.4
3,570,340	+		Ga0059261_3445	0.68	+0.1
3,570,431	-		Ga0059261_3445	0.74	+0.2
3,570,512	-		Ga0059261_3445	0.80	+1.1
3,570,631	+		Ga0059261_3445	0.88	-1.0
3,570,631	+		Ga0059261_3445	0.88	+0.1
3,570,631	+		Ga0059261_3445	0.88	+1.8
3,570,631	+		Ga0059261_3445	0.88	+1.5
3,570,631	+				-1.2
3,570,631	+		Ga0059261_3445	0.88	-0.8
3,570,631	+		Ga0059261_3445	0.88	+3.2
3,570,631	+		Ga0059261_3445	0.88	+0.4
3,570,631	+		Ga0059261_3445	0.88	+0.4
3,570,631	+		Ga0059261_3445	0.88	-0.4
3,570,632	-		Ga0059261_3445	0.88	+0.7
3,570,632	-		Ga0059261_3445	0.88	+0.4
3,570,632	-		Ga0059261_3445	0.88	+0.0
3,570,632	-		Ga0059261_3445	0.88	+0.1
3,570,691	+				-0.7
3,570,691	+				-0.8
3,570,691	+				-0.3
3,570,691	+				-2.1
3,570,691	+				-0.4
3,570,691	+				+0.5
3,570,691	+				+1.8
3,570,691	+				-0.6
3,570,691	+				-0.7
3,570,692	-				+0.7
3,570,692	-				-1.4
3,570,731	+				+0.0
3,570,731	+				+1.0
3,570,951	+				-0.8
3,570,951	+				-1.3
3,571,011	+				-0.7
3,571,012	-				-0.1
3,571,012	-				-0.6
3,571,012	-				+0.9
3,571,012	-				+2.2
3,571,047	+				-0.2
3,571,047	+				+0.2
3,571,047	+				+0.3
3,571,047	+				-1.9
3,571,048	-				-0.2
3,571,059	+		Ga0059261_3446	0.10	+0.7
3,571,059	+		Ga0059261_3446	0.10	-0.0
3,571,059	+		Ga0059261_3446	0.10	-0.4
3,571,059	+				+1.2
3,571,059	+		Ga0059261_3446	0.10	+0.5
3,571,059	+		Ga0059261_3446	0.10	+0.3
3,571,059	+		Ga0059261_3446	0.10	+0.2
3,571,060	-		Ga0059261_3446	0.10	-0.3
3,571,060	-		Ga0059261_3446	0.10	-0.3
3,571,060	-		Ga0059261_3446	0.10	-0.5
3,571,060	-		Ga0059261_3446	0.10	+0.4
3,571,060	-		Ga0059261_3446	0.10	-0.1
3,571,060	-		Ga0059261_3446	0.10	+0.0
3,571,164	+		Ga0059261_3446	0.14	+1.5
3,571,164	+		Ga0059261_3446	0.14	+0.0
3,571,216	-		Ga0059261_3446	0.16	+0.1
3,571,216	-		Ga0059261_3446	0.16	+0.6
3,571,216	-		Ga0059261_3446	0.16	+0.2
3,571,216	-		Ga0059261_3446	0.16	-1.5
3,571,311	+		Ga0059261_3446	0.20	+0.0
3,571,311	+		Ga0059261_3446	0.20	+0.1
3,571,312	-		Ga0059261_3446	0.20	+0.4
3,571,327	+		Ga0059261_3446	0.21	-0.9
3,571,330	-		Ga0059261_3446	0.21	-1.2
3,571,330	-		Ga0059261_3446	0.21	-0.3
3,571,330	-		Ga0059261_3446	0.21	-0.5
3,571,330	-		Ga0059261_3446	0.21	-1.3
3,571,330	-		Ga0059261_3446	0.21	-0.5
3,571,347	+		Ga0059261_3446	0.22	+0.0
3,571,347	+		Ga0059261_3446	0.22	-0.7
3,571,347	+		Ga0059261_3446	0.22	+0.5
3,571,347	+		Ga0059261_3446	0.22	-0.8
3,571,348	-		Ga0059261_3446	0.22	-2.2
3,571,348	-		Ga0059261_3446	0.22	+0.2
3,571,376	-		Ga0059261_3446	0.23	-0.4
3,571,389	+		Ga0059261_3446	0.23	+0.2
3,571,389	+		Ga0059261_3446	0.23	-0.2
3,571,389	+		Ga0059261_3446	0.23	-0.4
3,571,390	-		Ga0059261_3446	0.23	-0.3
3,571,390	-		Ga0059261_3446	0.23	+0.7
3,571,390	-		Ga0059261_3446	0.23	-0.3
3,571,390	-		Ga0059261_3446	0.23	+0.1
3,571,422	+		Ga0059261_3446	0.25	-0.5
3,571,423	-		Ga0059261_3446	0.25	-0.1
3,571,423	-		Ga0059261_3446	0.25	-0.4
3,571,446	+		Ga0059261_3446	0.26	+0.2
3,571,446	+		Ga0059261_3446	0.26	-0.1
3,571,447	-		Ga0059261_3446	0.26	+1.0
3,571,447	-		Ga0059261_3446	0.26	-0.8
3,571,548	+		Ga0059261_3446	0.30	+0.2
3,571,548	+		Ga0059261_3446	0.30	+1.2
3,571,548	+		Ga0059261_3446	0.30	+1.0
3,571,549	-		Ga0059261_3446	0.30	+1.0
3,571,549	-		Ga0059261_3446	0.30	+0.6
3,571,658	+		Ga0059261_3446	0.34	-0.2
3,571,658	+		Ga0059261_3446	0.34	-0.3
3,571,658	+		Ga0059261_3446	0.34	+0.3
3,571,658	+		Ga0059261_3446	0.34	-0.9
3,571,658	+		Ga0059261_3446	0.34	+0.2
3,571,658	+		Ga0059261_3446	0.34	+0.8
3,571,658	+		Ga0059261_3446	0.34	+0.1
3,571,658	+		Ga0059261_3446	0.34	+0.4
3,571,659	-		Ga0059261_3446	0.34	-0.3
3,571,800	+				+0.2
3,571,800	+		Ga0059261_3446	0.40	-0.1
3,571,800	+		Ga0059261_3446	0.40	-0.8
3,571,800	+		Ga0059261_3446	0.40	+0.2
3,571,800	+		Ga0059261_3446	0.40	+0.1
3,571,801	-		Ga0059261_3446	0.40	+0.8
3,571,801	-				-0.2
3,571,801	-		Ga0059261_3446	0.40	+0.1
3,571,801	-		Ga0059261_3446	0.40	-0.2
3,571,801	-		Ga0059261_3446	0.40	-0.3