Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2821

Experiment: Chloramphenicol 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0005 mg/ml
2,928,758	+		Ga0059261_2819	0.61	-1.6
2,928,758	+		Ga0059261_2819	0.61	+0.5
2,928,759	-		Ga0059261_2819	0.61	+0.2
2,928,759	-		Ga0059261_2819	0.61	-0.0
2,928,863	-		Ga0059261_2819	0.77	-0.4
2,928,912	+		Ga0059261_2819	0.84	-0.1
2,928,912	+		Ga0059261_2819	0.84	-0.2
2,928,913	-		Ga0059261_2819	0.84	-0.5
2,928,913	-		Ga0059261_2819	0.84	-1.2
2,928,913	-		Ga0059261_2819	0.84	+0.1
2,928,913	-		Ga0059261_2819	0.84	+0.6
2,928,985	+				+0.4
2,929,016	+				+0.0
2,929,016	+				-0.2
2,929,017	-				+0.2
2,929,017	-				-1.4
2,929,050	+				-0.2
2,929,050	+				-0.3
2,929,050	+				-0.0
2,929,051	-				+1.5
2,929,127	-		Ga0059261_2820	0.15	-0.1
2,929,200	-		Ga0059261_2820	0.27	-0.2
2,929,206	+		Ga0059261_2820	0.27	-1.1
2,929,206	+		Ga0059261_2820	0.27	-0.3
2,929,206	+		Ga0059261_2820	0.27	-0.5
2,929,206	+		Ga0059261_2820	0.27	+0.7
2,929,206	+		Ga0059261_2820	0.27	-0.2
2,929,206	+		Ga0059261_2820	0.27	+0.4
2,929,206	+		Ga0059261_2820	0.27	-0.3
2,929,206	+		Ga0059261_2820	0.27	+0.2
2,929,206	+				-0.8
2,929,206	+		Ga0059261_2820	0.27	+0.9
2,929,206	+		Ga0059261_2820	0.27	-0.2
2,929,206	+		Ga0059261_2820	0.27	+1.7
2,929,206	+		Ga0059261_2820	0.27	-0.1
2,929,206	+		Ga0059261_2820	0.27	-0.1
2,929,207	-		Ga0059261_2820	0.28	-0.2
2,929,207	-		Ga0059261_2820	0.28	-0.8
2,929,207	-		Ga0059261_2820	0.28	-0.1
2,929,207	-		Ga0059261_2820	0.28	+0.0
2,929,207	-		Ga0059261_2820	0.28	-0.4
2,929,207	-		Ga0059261_2820	0.28	+0.3
2,929,207	-		Ga0059261_2820	0.28	-2.0
2,929,207	-		Ga0059261_2820	0.28	+1.4
2,929,207	-		Ga0059261_2820	0.28	-0.7
2,929,207	-		Ga0059261_2820	0.28	+0.1
2,929,207	-		Ga0059261_2820	0.28	+0.3
2,929,207	-		Ga0059261_2820	0.28	-2.2
2,929,207	-		Ga0059261_2820	0.28	+0.2
2,929,207	-		Ga0059261_2820	0.28	+0.7
2,929,207	-		Ga0059261_2820	0.28	-0.4
2,929,212	+		Ga0059261_2820	0.28	-1.6
2,929,213	-		Ga0059261_2820	0.29	-0.4
2,929,236	-		Ga0059261_2820	0.32	+0.0
2,929,336	+		Ga0059261_2820	0.48	+0.0
2,929,336	+		Ga0059261_2820	0.48	+0.6
2,929,336	+		Ga0059261_2820	0.48	+0.5
2,929,336	+		Ga0059261_2820	0.48	+0.3
2,929,336	+		Ga0059261_2820	0.48	+0.4
2,929,337	-		Ga0059261_2820	0.48	+0.2
2,929,337	-		Ga0059261_2820	0.48	-0.2
2,929,390	-		Ga0059261_2820	0.56	-0.0
2,929,390	-		Ga0059261_2820	0.56	-0.5
2,929,390	-		Ga0059261_2820	0.56	-0.5
2,929,530	+		Ga0059261_2820	0.78	+0.4
2,929,530	+		Ga0059261_2820	0.78	+0.2
2,929,530	+		Ga0059261_2820	0.78	-0.7
2,929,530	+				-0.4
2,929,531	-		Ga0059261_2820	0.78	-0.4
2,929,531	-		Ga0059261_2820	0.78	+0.4
2,929,583	-		Ga0059261_2820	0.86	-0.8
2,929,607	-		Ga0059261_2820	0.90	-0.6
2,929,607	-		Ga0059261_2820	0.90	+0.3
2,929,607	-		Ga0059261_2820	0.90	-0.1
2,929,607	-		Ga0059261_2820	0.90	-0.8
2,929,620	-				+1.1
2,929,620	-				+1.6
2,929,706	+				-0.1
2,929,706	+				-0.4
2,929,706	+				-0.1
2,929,784	+		Ga0059261_2821	0.28	-0.5
2,929,784	+		Ga0059261_2821	0.28	-0.4
2,929,785	-		Ga0059261_2821	0.28	-0.3
2,929,785	-		Ga0059261_2821	0.28	-0.5
2,929,785	-		Ga0059261_2821	0.28	-0.4
2,929,785	-		Ga0059261_2821	0.28	-0.5
2,929,809	+		Ga0059261_2821	0.36	+0.1
2,929,810	-		Ga0059261_2821	0.37	+0.1
2,929,810	-		Ga0059261_2821	0.37	-0.1
2,929,838	+		Ga0059261_2821	0.47	-0.2
2,929,838	+				-0.8
2,929,838	+		Ga0059261_2821	0.47	+0.7
2,929,838	+		Ga0059261_2821	0.47	-0.3
2,929,838	+		Ga0059261_2821	0.47	-0.5
2,929,839	-		Ga0059261_2821	0.47	+1.2
2,929,839	-		Ga0059261_2821	0.47	-0.4
2,929,839	-		Ga0059261_2821	0.47	-0.1
2,929,839	-		Ga0059261_2821	0.47	+0.1
2,929,979	+				-0.5
2,929,979	+				-0.4
2,929,980	-				-0.3
2,929,980	-				-0.6
2,930,070	-				+0.5
2,930,182	+				+0.2
2,930,183	-				-0.4
2,930,259	+				+0.4
2,930,259	+				+0.0
2,930,259	+				-0.7
2,930,260	-				-0.0
2,930,260	-				+0.5
2,930,260	-				-0.4
2,930,301	+				-1.1
2,930,301	+				-0.4
2,930,301	+				+0.6
2,930,301	+				-0.1
2,930,301	+				-1.6
2,930,301	+				+0.1
2,930,301	+				+0.2
2,930,301	+				-0.3
2,930,302	-				-0.4
2,930,302	-				-0.0
2,930,302	-				-0.1
2,930,302	-				+0.9
2,930,302	-				+1.8
2,930,302	-				-0.5
2,930,302	-				-0.5
2,930,319	+				-0.1
2,930,319	+				+0.4
2,930,319	+				+0.6
2,930,320	-				-0.4
2,930,320	-				+0.5
2,930,373	+				-0.4
2,930,373	+				+0.4
2,930,373	+				-0.2
2,930,373	+				+1.0
2,930,374	-				-0.0
2,930,466	+				+2.2
2,930,466	+				-0.1
2,930,466	+				+0.9
2,930,511	+				+0.2
2,930,511	+				-1.2
2,930,511	+				-1.7
2,930,511	+				+0.4
2,930,511	+				+0.2
2,930,512	-				+0.1
2,930,529	+		Ga0059261_2822	0.10	-0.0
2,930,583	+		Ga0059261_2822	0.13	+0.1
2,930,583	+		Ga0059261_2822	0.13	-0.6
2,930,583	+		Ga0059261_2822	0.13	+0.1
2,930,584	-		Ga0059261_2822	0.13	+1.0
2,930,584	-		Ga0059261_2822	0.13	-0.4
2,930,584	-		Ga0059261_2822	0.13	-0.3
2,930,584	-		Ga0059261_2822	0.13	+0.2
2,930,619	+		Ga0059261_2822	0.14	+0.9
2,930,619	+		Ga0059261_2822	0.14	+0.3
2,930,697	+		Ga0059261_2822	0.17	+0.6
2,930,698	-		Ga0059261_2822	0.17	+0.2
2,930,712	+		Ga0059261_2822	0.18	+0.8
2,930,713	-		Ga0059261_2822	0.18	+2.2
2,930,713	-		Ga0059261_2822	0.18	+0.3
2,930,713	-		Ga0059261_2822	0.18	+0.8
2,930,720	-		Ga0059261_2822	0.18	-0.2
2,930,720	-		Ga0059261_2822	0.18	-0.1
2,930,839	+		Ga0059261_2822	0.23	+1.2
2,930,839	+		Ga0059261_2822	0.23	-0.1
2,930,895	+		Ga0059261_2822	0.25	+0.2
2,930,895	+		Ga0059261_2822	0.25	-0.1
2,930,895	+		Ga0059261_2822	0.25	-0.9
2,930,895	+		Ga0059261_2822	0.25	-0.8
2,930,895	+		Ga0059261_2822	0.25	+0.1
2,930,895	+		Ga0059261_2822	0.25	-0.9
2,930,895	+		Ga0059261_2822	0.25	-0.5
2,930,895	+		Ga0059261_2822	0.25	+0.6
2,930,895	+		Ga0059261_2822	0.25	+0.3
2,930,895	+		Ga0059261_2822	0.25	-0.3
2,930,895	+		Ga0059261_2822	0.25	-0.4
2,930,895	+		Ga0059261_2822	0.25	-0.3
2,930,895	+		Ga0059261_2822	0.25	+0.1
2,930,895	+		Ga0059261_2822	0.25	-0.8
2,930,895	+		Ga0059261_2822	0.25	-0.2
2,930,895	+		Ga0059261_2822	0.25	-0.2
2,930,895	+		Ga0059261_2822	0.25	+0.4
2,930,895	+		Ga0059261_2822	0.25	+0.3
2,930,895	+		Ga0059261_2822	0.25	-0.2
2,930,896	-		Ga0059261_2822	0.25	+0.2
2,930,896	-		Ga0059261_2822	0.25	-0.0
2,930,896	-		Ga0059261_2822	0.25	-0.1
2,930,896	-		Ga0059261_2822	0.25	-0.4
2,930,896	-		Ga0059261_2822	0.25	-0.5
2,930,896	-		Ga0059261_2822	0.25	-0.5
2,930,896	-		Ga0059261_2822	0.25	+0.4
2,930,896	-		Ga0059261_2822	0.25	-0.4
2,930,896	-		Ga0059261_2822	0.25	-0.5
2,930,896	-		Ga0059261_2822	0.25	-1.1
2,930,896	-		Ga0059261_2822	0.25	-0.2
2,930,896	-		Ga0059261_2822	0.25	-0.4