Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2804

Experiment: Chloramphenicol 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0005 mg/ml
2,910,925	-		Ga0059261_2802	0.88	-0.4
2,910,925	-		Ga0059261_2802	0.88	+0.6
2,910,925	-		Ga0059261_2802	0.88	+1.0
2,910,925	-		Ga0059261_2802	0.88	-0.4
2,910,925	-		Ga0059261_2802	0.88	-0.6
2,910,997	-				-0.2
2,910,998	+				+0.1
2,910,998	+				+0.1
2,910,999	-				+0.0
2,910,999	-				-0.8
2,910,999	-				-0.0
2,910,999	-				+0.6
2,910,999	-				-0.6
2,910,999	-				-0.4
2,911,026	+				-0.7
2,911,027	-				-0.6
2,911,027	-				+0.8
2,911,027	-				-0.4
2,911,027	-				+0.5
2,911,028	+				-0.4
2,911,028	+				-0.2
2,911,028	+				+1.0
2,911,029	-				-0.9
2,911,029	-				-0.2
2,911,029	-				-1.0
2,911,070	+				+0.4
2,911,070	+				-0.1
2,911,070	+				-0.7
2,911,070	+				-0.9
2,911,071	-				+0.2
2,911,167	+		Ga0059261_2803	0.19	-0.3
2,911,517	+		Ga0059261_2803	0.63	-0.5
2,911,517	+		Ga0059261_2803	0.63	+0.4
2,911,517	+		Ga0059261_2803	0.63	-1.5
2,911,517	+		Ga0059261_2803	0.63	+0.4
2,911,517	+		Ga0059261_2803	0.63	+0.2
2,911,517	+		Ga0059261_2803	0.63	+0.3
2,911,517	+		Ga0059261_2803	0.63	-0.5
2,911,518	-		Ga0059261_2803	0.63	-0.1
2,911,518	-		Ga0059261_2803	0.63	-0.2
2,911,518	-		Ga0059261_2803	0.63	-0.5
2,911,518	-		Ga0059261_2803	0.63	-1.0
2,911,518	-				+1.2
2,911,518	-		Ga0059261_2803	0.63	+0.8
2,911,518	-				-0.4
2,911,518	-		Ga0059261_2803	0.63	+0.0
2,911,518	-		Ga0059261_2803	0.63	-1.0
2,911,518	-		Ga0059261_2803	0.63	-0.9
2,911,518	-		Ga0059261_2803	0.63	-0.0
2,911,519	+		Ga0059261_2803	0.63	+0.1
2,911,519	+		Ga0059261_2803	0.63	-0.2
2,911,519	+		Ga0059261_2803	0.63	-0.4
2,911,519	+		Ga0059261_2803	0.63	-1.8
2,911,520	-		Ga0059261_2803	0.63	+1.2
2,911,520	-		Ga0059261_2803	0.63	+0.2
2,911,520	-		Ga0059261_2803	0.63	-0.1
2,911,520	-		Ga0059261_2803	0.63	-0.4
2,911,520	-		Ga0059261_2803	0.63	+0.7
2,911,520	-		Ga0059261_2803	0.63	-0.9
2,911,553	+		Ga0059261_2803	0.67	+0.9
2,911,553	+		Ga0059261_2803	0.67	-0.1
2,911,553	+		Ga0059261_2803	0.67	-0.3
2,911,554	-		Ga0059261_2803	0.67	-1.1
2,911,554	-		Ga0059261_2803	0.67	+1.6
2,911,554	-		Ga0059261_2803	0.67	-1.1
2,911,604	+		Ga0059261_2803	0.74	+0.5
2,911,604	+		Ga0059261_2803	0.74	+0.2
2,911,604	+		Ga0059261_2803	0.74	+0.8
2,911,604	+		Ga0059261_2803	0.74	-0.4
2,911,604	+		Ga0059261_2803	0.74	+0.0
2,911,604	+		Ga0059261_2803	0.74	-0.8
2,911,604	+		Ga0059261_2803	0.74	-0.8
2,911,604	+		Ga0059261_2803	0.74	+0.0
2,911,604	+		Ga0059261_2803	0.74	-0.0
2,911,604	+		Ga0059261_2803	0.74	-0.5
2,911,604	+		Ga0059261_2803	0.74	-0.6
2,911,604	+		Ga0059261_2803	0.74	+0.1
2,911,604	+		Ga0059261_2803	0.74	+0.4
2,911,604	+		Ga0059261_2803	0.74	+0.0
2,911,604	+		Ga0059261_2803	0.74	-0.6
2,911,605	-		Ga0059261_2803	0.74	-0.4
2,911,605	-		Ga0059261_2803	0.74	-0.7
2,911,605	-		Ga0059261_2803	0.74	-0.5
2,911,605	-		Ga0059261_2803	0.74	-0.0
2,911,605	-		Ga0059261_2803	0.74	+0.5
2,911,605	-		Ga0059261_2803	0.74	-1.1
2,911,605	-		Ga0059261_2803	0.74	-0.8
2,911,605	-		Ga0059261_2803	0.74	+1.0
2,911,605	-		Ga0059261_2803	0.74	+0.2
2,911,605	-		Ga0059261_2803	0.74	-1.4
2,911,605	-		Ga0059261_2803	0.74	-0.1
2,911,605	-		Ga0059261_2803	0.74	-0.1
2,911,605	-		Ga0059261_2803	0.74	-0.6
2,911,605	-		Ga0059261_2803	0.74	+1.0
2,912,017	-		Ga0059261_2804	0.29	+0.6
2,912,017	-		Ga0059261_2804	0.29	-0.6
2,912,017	-		Ga0059261_2804	0.29	-0.2
2,912,035	+		Ga0059261_2804	0.31	-0.2
2,912,036	-		Ga0059261_2804	0.31	+1.0
2,912,036	-		Ga0059261_2804	0.31	-0.2
2,912,056	+		Ga0059261_2804	0.34	-0.2
2,912,056	+		Ga0059261_2804	0.34	-0.4
2,912,056	+		Ga0059261_2804	0.34	-0.5
2,912,056	+		Ga0059261_2804	0.34	-0.4
2,912,056	+		Ga0059261_2804	0.34	-0.0
2,912,056	+		Ga0059261_2804	0.34	+0.1
2,912,057	-		Ga0059261_2804	0.34	-0.2
2,912,057	-		Ga0059261_2804	0.34	+0.0
2,912,215	+		Ga0059261_2804	0.56	-0.3
2,912,215	+		Ga0059261_2804	0.56	-1.2
2,912,215	+		Ga0059261_2804	0.56	-0.4
2,912,215	+		Ga0059261_2804	0.56	+0.9
2,912,215	+		Ga0059261_2804	0.56	-0.3
2,912,215	+		Ga0059261_2804	0.56	-0.8
2,912,215	+		Ga0059261_2804	0.56	+0.2
2,912,216	-		Ga0059261_2804	0.57	-1.4
2,912,216	-		Ga0059261_2804	0.57	-0.7
2,912,216	-		Ga0059261_2804	0.57	-1.0
2,912,216	-		Ga0059261_2804	0.57	-1.8
2,912,216	-		Ga0059261_2804	0.57	-0.9
2,912,216	-		Ga0059261_2804	0.57	-0.4
2,912,216	-		Ga0059261_2804	0.57	+0.3
2,912,298	+		Ga0059261_2804	0.68	+1.4
2,912,398	+		Ga0059261_2804	0.82	+0.2
2,912,398	+		Ga0059261_2804	0.82	+0.5
2,912,398	+		Ga0059261_2804	0.82	+0.1
2,912,398	+		Ga0059261_2804	0.82	-0.2
2,912,398	+		Ga0059261_2804	0.82	-0.2
2,912,399	-		Ga0059261_2804	0.82	-0.1
2,912,399	-		Ga0059261_2804	0.82	-1.3
2,912,399	-		Ga0059261_2804	0.82	-0.3
2,912,399	-		Ga0059261_2804	0.82	-0.0
2,912,399	-		Ga0059261_2804	0.82	-1.1
2,912,553	-				-1.2
2,912,626	+				-0.7
2,912,626	+				+0.1
2,912,626	+				+0.9
2,912,626	+				+0.5
2,912,626	+				+0.4
2,912,626	+				+1.0
2,912,626	+				+0.5
2,912,626	+				+1.0
2,912,626	+				-0.4
2,912,626	+				-0.3
2,912,627	-				-0.8
2,912,627	-				-0.3
2,912,627	-				-0.5
2,912,627	-				-0.0
2,912,627	-				+0.4
2,912,627	-				-0.0
2,912,627	-				-0.2
2,912,627	-				+0.4
2,912,627	-				-0.9
2,912,627	-				+0.2
2,912,627	-				+0.6
2,912,627	-				+0.3
2,912,627	-				-1.2
2,912,627	-				+0.3
2,912,656	+				+0.1
2,912,657	-				+0.0
2,912,657	-				-0.0
2,912,676	+				-0.4
2,912,676	+				-0.7
2,912,676	+				-0.4
2,912,710	+		Ga0059261_2805	0.10	-0.9
2,912,710	+		Ga0059261_2805	0.10	+1.2
2,912,710	+		Ga0059261_2805	0.10	+0.7
2,912,710	+		Ga0059261_2805	0.10	-0.0
2,912,710	+		Ga0059261_2805	0.10	-0.1
2,912,710	+		Ga0059261_2805	0.10	-0.6
2,912,711	-		Ga0059261_2805	0.10	-0.1
2,912,711	-		Ga0059261_2805	0.10	-0.2
2,912,711	-		Ga0059261_2805	0.10	+0.5
2,912,711	-		Ga0059261_2805	0.10	-0.3
2,912,833	+		Ga0059261_2805	0.25	-0.0
2,912,842	+		Ga0059261_2805	0.26	-0.2
2,912,842	+		Ga0059261_2805	0.26	+0.1
2,912,842	+		Ga0059261_2805	0.26	-0.4
2,912,842	+		Ga0059261_2805	0.26	+1.6
2,912,842	+		Ga0059261_2805	0.26	-0.3
2,912,842	+		Ga0059261_2805	0.26	-0.1
2,912,843	-		Ga0059261_2805	0.26	+0.0
2,912,843	-		Ga0059261_2805	0.26	-0.1
2,912,843	-		Ga0059261_2805	0.26	+0.4
2,912,843	-		Ga0059261_2805	0.26	+0.6
2,912,843	-		Ga0059261_2805	0.26	-0.2
2,912,874	-				+1.2
2,912,888	-		Ga0059261_2805	0.32	+0.6
2,912,903	+				-0.4
2,912,903	+		Ga0059261_2805	0.33	-0.3
2,912,903	+		Ga0059261_2805	0.33	+1.1
2,912,903	+		Ga0059261_2805	0.33	+0.3
2,912,904	-		Ga0059261_2805	0.34	+0.3
2,912,904	-		Ga0059261_2805	0.34	+0.3
2,912,908	+		Ga0059261_2805	0.34	+0.0
2,912,908	+		Ga0059261_2805	0.34	+0.1
2,912,914	+		Ga0059261_2805	0.35	+0.4
2,912,914	+		Ga0059261_2805	0.35	+1.0
2,912,914	+		Ga0059261_2805	0.35	-1.5
2,912,915	-		Ga0059261_2805	0.35	+0.4
2,912,915	-		Ga0059261_2805	0.35	-0.5
2,912,915	-		Ga0059261_2805	0.35	-0.1
2,912,947	+		Ga0059261_2805	0.39	-0.7
2,912,947	+		Ga0059261_2805	0.39	+0.2
2,912,947	+				+0.8
2,912,977	+		Ga0059261_2805	0.42	+0.2
2,912,977	+		Ga0059261_2805	0.42	-0.6
2,912,977	+		Ga0059261_2805	0.42	-0.5
2,912,977	+		Ga0059261_2805	0.42	-0.1
2,912,978	-		Ga0059261_2805	0.42	+0.2
2,912,978	-		Ga0059261_2805	0.42	+1.7
2,912,978	-		Ga0059261_2805	0.42	-1.1
2,912,978	-		Ga0059261_2805	0.42	-0.1
2,912,978	-		Ga0059261_2805	0.42	+0.2
2,912,978	-		Ga0059261_2805	0.42	+0.5
2,913,103	+				+2.2
2,913,103	+				+0.6
2,913,160	+		Ga0059261_2805	0.64	-0.8
2,913,160	+		Ga0059261_2805	0.64	-0.4
2,913,161	-				-0.1
2,913,161	-		Ga0059261_2805	0.65	+0.2
2,913,161	-		Ga0059261_2805	0.65	-1.7
2,913,161	-		Ga0059261_2805	0.65	+0.2
2,913,191	-				+0.6
2,913,191	-		Ga0059261_2805	0.68	+0.4
2,913,337	+		Ga0059261_2805	0.86	-0.2
2,913,337	+		Ga0059261_2805	0.86	+0.2
2,913,337	+		Ga0059261_2805	0.86	+1.2
2,913,337	+		Ga0059261_2805	0.86	-0.5
2,913,338	-		Ga0059261_2805	0.86	+0.3
2,913,347	+		Ga0059261_2805	0.87	+0.1
2,913,348	-		Ga0059261_2805	0.87	+0.8
2,913,348	-		Ga0059261_2805	0.87	+0.2
2,913,348	-		Ga0059261_2805	0.87	+0.7
2,913,348	-		Ga0059261_2805	0.87	-0.8
2,913,348	-		Ga0059261_2805	0.87	-0.0
2,913,349	+				-1.8
2,913,350	-		Ga0059261_2805	0.87	-0.2
2,913,350	-		Ga0059261_2805	0.87	-0.5
2,913,350	-		Ga0059261_2805	0.87	+0.0
2,913,350	-		Ga0059261_2805	0.87	+0.3
2,913,447	+				+0.0
2,913,447	+				+0.1
2,913,447	+				-0.8
2,913,447	+				+0.2
2,913,448	-				-0.4
2,913,448	-				+0.3
2,913,448	-				-0.4
2,913,448	-				-1.3
2,913,448	-				+0.2
2,913,448	-				+1.4
2,913,448	-				-1.0
2,913,448	-				+0.5
2,913,481	+				+2.2
2,913,481	+				-0.4
2,913,482	-				-0.2
2,913,482	-				-0.2
2,913,509	+				+0.5
2,913,510	-				-0.4
2,913,510	-				-0.0
2,913,510	-				+0.2