Experiment: Chloramphenicol 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2319 and Ga0059261_2320 overlap by 4 nucleotides Ga0059261_2320 and Ga0059261_2321 are separated by 210 nucleotides Ga0059261_2321 and Ga0059261_2322 are separated by 25 nucleotides
Ga0059261_2319: Ga0059261_2319 - NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding, at 2,431,560 to 2,432,432
_2319
Ga0059261_2320: Ga0059261_2320 - Uncharacterized relative of glutathione S-transferase, MAPEG superfamily, at 2,432,429 to 2,432,860
_2320
Ga0059261_2321: Ga0059261_2321 - LSU ribosomal protein L32P, at 2,433,071 to 2,433,250
_2321
Ga0059261_2322: Ga0059261_2322 - phosphate:acyl-[acyl carrier protein] acyltransferase, at 2,433,276 to 2,434,307
_2322
Position (kb)
2433
2434 Strain fitness (log2 ratio)
-2
-1
0
1 at 2432.104 kb on - strand, within Ga0059261_2319 at 2432.205 kb on + strand, within Ga0059261_2319 at 2432.206 kb on - strand, within Ga0059261_2319 at 2432.206 kb on - strand, within Ga0059261_2319 at 2432.206 kb on - strand, within Ga0059261_2319 at 2432.206 kb on - strand, within Ga0059261_2319 at 2432.388 kb on + strand at 2432.388 kb on + strand at 2432.388 kb on + strand at 2432.389 kb on - strand at 2432.389 kb on - strand at 2432.389 kb on - strand at 2432.430 kb on + strand at 2432.430 kb on + strand at 2432.431 kb on - strand at 2432.431 kb on - strand at 2432.431 kb on - strand at 2432.431 kb on - strand at 2432.478 kb on + strand, within Ga0059261_2320 at 2432.478 kb on + strand, within Ga0059261_2320 at 2432.479 kb on - strand, within Ga0059261_2320 at 2432.479 kb on - strand, within Ga0059261_2320 at 2432.496 kb on + strand, within Ga0059261_2320 at 2432.496 kb on + strand, within Ga0059261_2320 at 2432.496 kb on + strand, within Ga0059261_2320 at 2432.497 kb on - strand, within Ga0059261_2320 at 2432.497 kb on - strand, within Ga0059261_2320 at 2432.497 kb on - strand, within Ga0059261_2320 at 2432.497 kb on - strand, within Ga0059261_2320 at 2432.685 kb on + strand, within Ga0059261_2320 at 2432.685 kb on + strand, within Ga0059261_2320 at 2432.685 kb on + strand, within Ga0059261_2320 at 2432.686 kb on - strand, within Ga0059261_2320 at 2432.848 kb on + strand at 2432.849 kb on - strand at 2432.849 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chloramphenicol 0.0005 mg/ml remove 2,432,104 - Ga0059261_2319 0.62 -0.1 2,432,205 + Ga0059261_2319 0.74 -1.1 2,432,206 - Ga0059261_2319 0.74 -0.2 2,432,206 - Ga0059261_2319 0.74 +0.4 2,432,206 - Ga0059261_2319 0.74 -0.4 2,432,206 - Ga0059261_2319 0.74 -0.5 2,432,388 + +0.3 2,432,388 + +0.3 2,432,388 + -1.9 2,432,389 - -0.2 2,432,389 - -0.1 2,432,389 - +1.3 2,432,430 + +0.0 2,432,430 + -1.6 2,432,431 - +0.3 2,432,431 - +1.1 2,432,431 - +1.1 2,432,431 - +0.5 2,432,478 + Ga0059261_2320 0.11 -1.1 2,432,478 + Ga0059261_2320 0.11 -0.3 2,432,479 - Ga0059261_2320 0.12 -0.4 2,432,479 - Ga0059261_2320 0.12 -1.5 2,432,496 + Ga0059261_2320 0.16 -0.7 2,432,496 + Ga0059261_2320 0.16 +0.3 2,432,496 + Ga0059261_2320 0.16 -0.2 2,432,497 - Ga0059261_2320 0.16 -1.6 2,432,497 - Ga0059261_2320 0.16 -0.6 2,432,497 - Ga0059261_2320 0.16 +1.3 2,432,497 - Ga0059261_2320 0.16 -1.3 2,432,685 + Ga0059261_2320 0.59 -0.3 2,432,685 + Ga0059261_2320 0.59 -0.3 2,432,685 + Ga0059261_2320 0.59 -0.3 2,432,686 - Ga0059261_2320 0.59 -0.2 2,432,848 + -0.4 2,432,849 - +0.6 2,432,849 - +0.3
Or see this region's nucleotide sequence