Experiment: Chloramphenicol 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0873 and Ga0059261_0874 are separated by 160 nucleotides Ga0059261_0874 and Ga0059261_0875 are separated by 39 nucleotides Ga0059261_0875 and Ga0059261_0876 are separated by 291 nucleotides
Ga0059261_0873: Ga0059261_0873 - nucleoside diphosphate kinase (EC 2.7.4.6), at 912,867 to 913,289
_0873
Ga0059261_0874: Ga0059261_0874 - DNA polymerase III, chi subunit (EC 2.7.7.7), at 913,450 to 913,890
_0874
Ga0059261_0875: Ga0059261_0875 - Leucyl aminopeptidase, at 913,930 to 915,405
_0875
Ga0059261_0876: Ga0059261_0876 - Organic solvent tolerance protein OstA, at 915,697 to 918,006
_0876
Position (kb)
913
914
915
916 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 913.311 kb on - strand at 913.336 kb on - strand at 913.336 kb on - strand at 913.336 kb on - strand at 913.403 kb on - strand at 913.403 kb on - strand at 913.403 kb on - strand at 913.403 kb on - strand at 913.440 kb on + strand at 913.440 kb on + strand at 913.440 kb on + strand at 913.440 kb on + strand at 913.441 kb on - strand at 913.441 kb on - strand at 913.441 kb on - strand at 913.451 kb on + strand at 913.451 kb on + strand at 913.451 kb on + strand at 913.451 kb on + strand at 913.452 kb on - strand at 913.452 kb on - strand at 913.452 kb on - strand at 914.001 kb on - strand at 914.001 kb on - strand at 914.001 kb on - strand at 914.001 kb on - strand at 914.001 kb on - strand at 914.169 kb on - strand, within Ga0059261_0875 at 914.169 kb on - strand, within Ga0059261_0875 at 914.916 kb on - strand, within Ga0059261_0875 at 915.452 kb on - strand at 915.452 kb on - strand at 915.452 kb on - strand at 915.480 kb on + strand at 915.480 kb on + strand at 915.481 kb on - strand at 915.481 kb on - strand at 915.481 kb on - strand at 915.481 kb on - strand at 915.692 kb on + strand at 915.692 kb on + strand at 915.693 kb on - strand at 915.693 kb on - strand at 915.705 kb on + strand at 915.748 kb on + strand at 915.748 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chloramphenicol 0.0005 mg/ml remove 913,311 - +0.1 913,336 - -1.8 913,336 - -1.1 913,336 - -0.1 913,403 - +0.2 913,403 - -0.7 913,403 - -0.1 913,403 - -0.2 913,440 + -0.3 913,440 + -0.1 913,440 + +2.8 913,440 + -0.0 913,441 - -2.3 913,441 - -0.2 913,441 - -0.2 913,451 + +1.6 913,451 + -0.1 913,451 + +0.2 913,451 + +0.0 913,452 - +0.4 913,452 - +1.8 913,452 - -2.5 914,001 - -0.3 914,001 - +0.8 914,001 - +0.1 914,001 - -0.3 914,001 - +0.3 914,169 - Ga0059261_0875 0.16 +0.6 914,169 - Ga0059261_0875 0.16 -0.4 914,916 - Ga0059261_0875 0.67 +1.2 915,452 - -0.1 915,452 - -0.1 915,452 - +0.8 915,480 + -0.3 915,480 + -1.0 915,481 - -0.4 915,481 - -0.3 915,481 - +0.5 915,481 - -0.6 915,692 + +0.4 915,692 + -0.8 915,693 - -2.0 915,693 - -0.1 915,705 + -0.6 915,748 + -2.4 915,748 + -0.5
Or see this region's nucleotide sequence