Experiment: D-Mannitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS18110 and EX31_RS18115 are separated by 11 nucleotides EX31_RS18115 and EX31_RS18120 overlap by 4 nucleotides EX31_RS18120 and EX31_RS18125 are separated by 75 nucleotides
EX31_RS18110: EX31_RS18110 - FMNH2-dependent alkanesulfonate monooxygenase, at 183,558 to 184,712
_RS18110
EX31_RS18115: EX31_RS18115 - aliphatic sulfonate ABC transporter permease SsuC, at 184,724 to 185,515
_RS18115
EX31_RS18120: EX31_RS18120 - aliphatic sulfonates ABC transporter ATP-binding protein, at 185,512 to 186,294
_RS18120
EX31_RS18125: EX31_RS18125 - aminopeptidase N, at 186,370 to 188,985
_RS18125
Position (kb) 184
185
186 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 183.803 kb on + strand, within EX31_RS18110 at 183.804 kb on - strand, within EX31_RS18110 at 183.872 kb on + strand, within EX31_RS18110 at 183.919 kb on + strand, within EX31_RS18110 at 183.920 kb on - strand, within EX31_RS18110 at 183.920 kb on - strand, within EX31_RS18110 at 183.932 kb on + strand, within EX31_RS18110 at 183.932 kb on + strand, within EX31_RS18110 at 183.942 kb on + strand, within EX31_RS18110 at 183.968 kb on + strand, within EX31_RS18110 at 184.080 kb on + strand, within EX31_RS18110 at 184.081 kb on - strand, within EX31_RS18110 at 184.138 kb on - strand, within EX31_RS18110 at 184.319 kb on + strand, within EX31_RS18110 at 184.319 kb on + strand, within EX31_RS18110 at 184.320 kb on - strand, within EX31_RS18110 at 184.447 kb on + strand, within EX31_RS18110 at 184.447 kb on + strand, within EX31_RS18110 at 184.502 kb on + strand, within EX31_RS18110 at 184.502 kb on + strand, within EX31_RS18110 at 184.502 kb on + strand, within EX31_RS18110 at 184.503 kb on - strand, within EX31_RS18110 at 184.503 kb on - strand, within EX31_RS18110 at 184.512 kb on + strand, within EX31_RS18110 at 184.512 kb on + strand, within EX31_RS18110 at 184.513 kb on - strand, within EX31_RS18110 at 184.532 kb on + strand, within EX31_RS18110 at 184.533 kb on - strand, within EX31_RS18110 at 184.538 kb on + strand, within EX31_RS18110 at 184.572 kb on + strand, within EX31_RS18110 at 184.631 kb on + strand at 184.632 kb on - strand at 184.916 kb on - strand, within EX31_RS18115 at 185.138 kb on + strand, within EX31_RS18115 at 185.150 kb on + strand, within EX31_RS18115 at 185.227 kb on + strand, within EX31_RS18115 at 185.238 kb on + strand, within EX31_RS18115 at 185.238 kb on + strand, within EX31_RS18115 at 185.238 kb on + strand, within EX31_RS18115 at 185.238 kb on + strand, within EX31_RS18115 at 185.239 kb on - strand, within EX31_RS18115 at 185.263 kb on + strand, within EX31_RS18115 at 185.263 kb on + strand, within EX31_RS18115 at 185.349 kb on - strand, within EX31_RS18115 at 185.412 kb on - strand, within EX31_RS18115 at 185.667 kb on + strand, within EX31_RS18120 at 185.667 kb on + strand, within EX31_RS18120 at 185.811 kb on + strand, within EX31_RS18120 at 185.811 kb on + strand, within EX31_RS18120 at 185.955 kb on - strand, within EX31_RS18120 at 185.955 kb on - strand, within EX31_RS18120 at 186.158 kb on + strand, within EX31_RS18120 at 186.299 kb on + strand at 186.299 kb on + strand at 186.299 kb on + strand at 186.299 kb on + strand at 186.299 kb on + strand at 186.300 kb on - strand at 186.300 kb on - strand at 186.312 kb on + strand at 186.312 kb on + strand at 186.313 kb on - strand at 186.371 kb on + strand at 186.372 kb on - strand at 186.380 kb on - strand at 186.380 kb on - strand at 186.480 kb on - strand at 186.511 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannitol (C) remove 183,803 + EX31_RS18110 0.21 -1.2 183,804 - EX31_RS18110 0.21 -1.0 183,872 + EX31_RS18110 0.27 -1.4 183,919 + EX31_RS18110 0.31 -2.0 183,920 - EX31_RS18110 0.31 -0.7 183,920 - EX31_RS18110 0.31 -1.7 183,932 + EX31_RS18110 0.32 -0.7 183,932 + EX31_RS18110 0.32 -0.3 183,942 + EX31_RS18110 0.33 +0.2 183,968 + EX31_RS18110 0.35 -0.4 184,080 + EX31_RS18110 0.45 +0.6 184,081 - EX31_RS18110 0.45 -1.0 184,138 - EX31_RS18110 0.50 +1.2 184,319 + EX31_RS18110 0.66 -0.7 184,319 + EX31_RS18110 0.66 +0.6 184,320 - EX31_RS18110 0.66 -1.7 184,447 + EX31_RS18110 0.77 -0.4 184,447 + EX31_RS18110 0.77 -3.0 184,502 + EX31_RS18110 0.82 +0.9 184,502 + EX31_RS18110 0.82 -1.2 184,502 + EX31_RS18110 0.82 -0.7 184,503 - EX31_RS18110 0.82 -0.8 184,503 - EX31_RS18110 0.82 +0.7 184,512 + EX31_RS18110 0.83 +0.0 184,512 + EX31_RS18110 0.83 +0.0 184,513 - EX31_RS18110 0.83 +0.6 184,532 + EX31_RS18110 0.84 -0.4 184,533 - EX31_RS18110 0.84 -0.7 184,538 + EX31_RS18110 0.85 -0.2 184,572 + EX31_RS18110 0.88 -0.2 184,631 + -0.4 184,632 - -1.9 184,916 - EX31_RS18115 0.24 -0.4 185,138 + EX31_RS18115 0.52 +0.0 185,150 + EX31_RS18115 0.54 -1.1 185,227 + EX31_RS18115 0.64 -2.2 185,238 + EX31_RS18115 0.65 -1.2 185,238 + EX31_RS18115 0.65 -0.4 185,238 + EX31_RS18115 0.65 -0.3 185,238 + EX31_RS18115 0.65 -0.2 185,239 - EX31_RS18115 0.65 -1.5 185,263 + EX31_RS18115 0.68 -0.1 185,263 + EX31_RS18115 0.68 -1.0 185,349 - EX31_RS18115 0.79 -1.0 185,412 - EX31_RS18115 0.87 -0.7 185,667 + EX31_RS18120 0.20 -2.4 185,667 + EX31_RS18120 0.20 -0.4 185,811 + EX31_RS18120 0.38 -0.3 185,811 + EX31_RS18120 0.38 +1.0 185,955 - EX31_RS18120 0.57 +0.6 185,955 - EX31_RS18120 0.57 -2.1 186,158 + EX31_RS18120 0.83 -1.1 186,299 + +2.2 186,299 + +0.6 186,299 + +0.1 186,299 + -1.4 186,299 + +0.6 186,300 - +0.3 186,300 - +0.6 186,312 + +0.6 186,312 + -1.7 186,313 - +0.4 186,371 + +0.0 186,372 - +0.5 186,380 - +0.6 186,380 - +0.3 186,480 - +0.7 186,511 - +1.0
Or see this region's nucleotide sequence