Experiment: D-Mannitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS10635 and EX31_RS10640 are separated by 234 nucleotides EX31_RS10640 and EX31_RS10645 are separated by 633 nucleotides
EX31_RS10635: EX31_RS10635 - MurR/RpiR family transcriptional regulator, at 40,590 to 41,459
_RS10635
EX31_RS10640: EX31_RS10640 - pyruvate kinase, at 41,694 to 43,136
_RS10640
EX31_RS10645: EX31_RS10645 - aspartate aminotransferase family protein, at 43,770 to 45,338
_RS10645
Position (kb) 41
42
43
44 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 40.737 kb on - strand, within EX31_RS10635 at 40.737 kb on - strand, within EX31_RS10635 at 40.741 kb on + strand, within EX31_RS10635 at 40.741 kb on + strand, within EX31_RS10635 at 40.792 kb on + strand, within EX31_RS10635 at 40.793 kb on - strand, within EX31_RS10635 at 40.793 kb on - strand, within EX31_RS10635 at 40.827 kb on + strand, within EX31_RS10635 at 40.827 kb on + strand, within EX31_RS10635 at 40.827 kb on + strand, within EX31_RS10635 at 40.827 kb on + strand, within EX31_RS10635 at 40.827 kb on + strand, within EX31_RS10635 at 40.828 kb on - strand, within EX31_RS10635 at 40.828 kb on - strand, within EX31_RS10635 at 40.828 kb on - strand, within EX31_RS10635 at 40.828 kb on - strand, within EX31_RS10635 at 40.828 kb on - strand, within EX31_RS10635 at 40.828 kb on - strand, within EX31_RS10635 at 40.828 kb on - strand, within EX31_RS10635 at 40.828 kb on - strand, within EX31_RS10635 at 40.828 kb on - strand, within EX31_RS10635 at 40.828 kb on - strand, within EX31_RS10635 at 40.828 kb on - strand, within EX31_RS10635 at 40.828 kb on - strand, within EX31_RS10635 at 40.828 kb on - strand, within EX31_RS10635 at 40.828 kb on - strand, within EX31_RS10635 at 40.828 kb on - strand, within EX31_RS10635 at 40.839 kb on - strand, within EX31_RS10635 at 40.869 kb on + strand, within EX31_RS10635 at 40.869 kb on + strand, within EX31_RS10635 at 40.869 kb on + strand, within EX31_RS10635 at 40.870 kb on - strand, within EX31_RS10635 at 40.870 kb on - strand, within EX31_RS10635 at 40.923 kb on - strand, within EX31_RS10635 at 41.048 kb on + strand, within EX31_RS10635 at 41.064 kb on + strand, within EX31_RS10635 at 41.065 kb on - strand, within EX31_RS10635 at 41.065 kb on - strand, within EX31_RS10635 at 41.065 kb on - strand, within EX31_RS10635 at 41.199 kb on - strand, within EX31_RS10635 at 41.222 kb on + strand, within EX31_RS10635 at 41.222 kb on + strand, within EX31_RS10635 at 41.222 kb on + strand, within EX31_RS10635 at 41.225 kb on + strand, within EX31_RS10635 at 41.226 kb on - strand, within EX31_RS10635 at 41.289 kb on + strand, within EX31_RS10635 at 41.289 kb on + strand, within EX31_RS10635 at 41.289 kb on + strand, within EX31_RS10635 at 41.289 kb on + strand, within EX31_RS10635 at 41.289 kb on + strand, within EX31_RS10635 at 41.290 kb on - strand, within EX31_RS10635 at 41.290 kb on - strand, within EX31_RS10635 at 41.291 kb on + strand, within EX31_RS10635 at 41.291 kb on + strand, within EX31_RS10635 at 41.291 kb on + strand, within EX31_RS10635 at 41.292 kb on - strand, within EX31_RS10635 at 41.352 kb on - strand, within EX31_RS10635 at 41.381 kb on + strand at 41.381 kb on + strand at 41.457 kb on + strand at 41.495 kb on - strand at 41.499 kb on + strand at 41.499 kb on + strand at 41.499 kb on + strand at 41.499 kb on + strand at 41.499 kb on + strand at 41.499 kb on + strand at 41.499 kb on + strand at 41.499 kb on + strand at 41.499 kb on + strand at 41.499 kb on + strand at 41.499 kb on + strand at 41.499 kb on + strand at 41.499 kb on + strand at 41.499 kb on + strand at 41.499 kb on + strand at 41.500 kb on + strand at 41.500 kb on - strand at 41.500 kb on - strand at 41.500 kb on - strand at 41.500 kb on - strand at 41.501 kb on + strand at 41.501 kb on + strand at 41.501 kb on + strand at 41.501 kb on + strand at 41.501 kb on + strand at 41.501 kb on + strand at 41.501 kb on + strand at 41.502 kb on - strand at 41.502 kb on - strand at 41.523 kb on + strand at 41.523 kb on + strand at 41.547 kb on + strand at 41.630 kb on + strand at 41.630 kb on + strand at 41.689 kb on + strand at 41.689 kb on + strand at 41.689 kb on + strand at 41.759 kb on + strand at 41.802 kb on - strand at 41.802 kb on - strand at 42.033 kb on + strand, within EX31_RS10640 at 42.035 kb on + strand, within EX31_RS10640 at 42.035 kb on + strand, within EX31_RS10640 at 42.036 kb on - strand, within EX31_RS10640 at 42.076 kb on + strand, within EX31_RS10640 at 42.171 kb on - strand, within EX31_RS10640 at 42.182 kb on + strand, within EX31_RS10640 at 42.239 kb on + strand, within EX31_RS10640 at 42.239 kb on + strand, within EX31_RS10640 at 42.239 kb on + strand, within EX31_RS10640 at 42.240 kb on - strand, within EX31_RS10640 at 42.240 kb on - strand, within EX31_RS10640 at 42.262 kb on + strand, within EX31_RS10640 at 42.262 kb on + strand, within EX31_RS10640 at 42.262 kb on + strand, within EX31_RS10640 at 42.262 kb on + strand, within EX31_RS10640 at 42.263 kb on - strand, within EX31_RS10640 at 42.267 kb on + strand, within EX31_RS10640 at 42.305 kb on + strand, within EX31_RS10640 at 42.605 kb on - strand, within EX31_RS10640 at 42.605 kb on - strand, within EX31_RS10640 at 42.770 kb on + strand, within EX31_RS10640 at 42.805 kb on - strand, within EX31_RS10640 at 42.884 kb on + strand, within EX31_RS10640 at 42.884 kb on + strand, within EX31_RS10640 at 42.885 kb on - strand, within EX31_RS10640 at 42.998 kb on - strand at 43.025 kb on - strand at 43.034 kb on + strand at 43.091 kb on + strand at 43.129 kb on + strand at 43.134 kb on + strand at 43.147 kb on + strand at 43.150 kb on + strand at 43.155 kb on + strand at 43.157 kb on + strand at 43.158 kb on - strand at 43.163 kb on + strand at 43.216 kb on - strand at 43.218 kb on + strand at 43.249 kb on - strand at 43.325 kb on - strand at 43.464 kb on + strand at 43.465 kb on - strand at 43.475 kb on - strand at 43.571 kb on + strand at 43.571 kb on + strand at 43.571 kb on + strand at 43.571 kb on + strand at 43.571 kb on + strand at 43.572 kb on - strand at 43.572 kb on - strand at 43.572 kb on - strand at 43.573 kb on + strand at 43.573 kb on + strand at 43.573 kb on + strand at 43.573 kb on + strand at 43.573 kb on + strand at 43.573 kb on + strand at 43.573 kb on + strand at 43.573 kb on + strand at 43.574 kb on - strand at 43.574 kb on - strand at 43.574 kb on - strand at 43.574 kb on - strand at 43.584 kb on + strand at 43.584 kb on + strand at 43.604 kb on + strand at 43.604 kb on + strand at 43.604 kb on + strand at 43.604 kb on + strand at 43.604 kb on + strand at 43.604 kb on + strand at 43.604 kb on + strand at 43.604 kb on + strand at 43.604 kb on + strand at 43.605 kb on - strand at 43.605 kb on - strand at 43.605 kb on - strand at 43.605 kb on - strand at 43.605 kb on - strand at 43.628 kb on + strand at 43.628 kb on + strand at 43.628 kb on + strand at 43.628 kb on + strand at 43.629 kb on - strand at 43.634 kb on - strand at 43.634 kb on - strand at 43.643 kb on + strand at 43.643 kb on + strand at 43.643 kb on + strand at 43.643 kb on + strand at 43.650 kb on + strand at 43.686 kb on - strand at 43.781 kb on - strand at 43.841 kb on - strand at 43.857 kb on + strand at 43.859 kb on + strand at 44.056 kb on + strand, within EX31_RS10645 at 44.056 kb on + strand, within EX31_RS10645 at 44.057 kb on - strand, within EX31_RS10645 at 44.077 kb on - strand, within EX31_RS10645 at 44.126 kb on - strand, within EX31_RS10645
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannitol (C) remove 40,737 - EX31_RS10635 0.17 -2.2 40,737 - EX31_RS10635 0.17 -0.4 40,741 + EX31_RS10635 0.17 -1.0 40,741 + EX31_RS10635 0.17 -1.7 40,792 + EX31_RS10635 0.23 +0.0 40,793 - EX31_RS10635 0.23 -1.2 40,793 - EX31_RS10635 0.23 +0.6 40,827 + EX31_RS10635 0.27 -0.7 40,827 + EX31_RS10635 0.27 -0.4 40,827 + EX31_RS10635 0.27 -1.0 40,827 + EX31_RS10635 0.27 -1.2 40,827 + EX31_RS10635 0.27 -1.9 40,828 - EX31_RS10635 0.27 -2.7 40,828 - EX31_RS10635 0.27 -1.0 40,828 - EX31_RS10635 0.27 -2.3 40,828 - EX31_RS10635 0.27 +0.6 40,828 - EX31_RS10635 0.27 -0.4 40,828 - EX31_RS10635 0.27 -1.0 40,828 - EX31_RS10635 0.27 -2.0 40,828 - EX31_RS10635 0.27 -0.7 40,828 - EX31_RS10635 0.27 -0.4 40,828 - EX31_RS10635 0.27 +0.1 40,828 - EX31_RS10635 0.27 -0.6 40,828 - EX31_RS10635 0.27 -1.4 40,828 - EX31_RS10635 0.27 -0.5 40,828 - EX31_RS10635 0.27 -0.4 40,828 - EX31_RS10635 0.27 -0.5 40,839 - EX31_RS10635 0.29 -0.8 40,869 + EX31_RS10635 0.32 +0.6 40,869 + EX31_RS10635 0.32 +0.6 40,869 + EX31_RS10635 0.32 -1.6 40,870 - EX31_RS10635 0.32 +0.1 40,870 - EX31_RS10635 0.32 +0.0 40,923 - EX31_RS10635 0.38 -2.0 41,048 + EX31_RS10635 0.53 -0.8 41,064 + EX31_RS10635 0.54 -1.1 41,065 - EX31_RS10635 0.55 -0.4 41,065 - EX31_RS10635 0.55 +0.3 41,065 - EX31_RS10635 0.55 +1.2 41,199 - EX31_RS10635 0.70 +0.0 41,222 + EX31_RS10635 0.73 +0.6 41,222 + EX31_RS10635 0.73 -0.8 41,222 + EX31_RS10635 0.73 -0.9 41,225 + EX31_RS10635 0.73 -0.8 41,226 - EX31_RS10635 0.73 +0.3 41,289 + EX31_RS10635 0.80 -0.1 41,289 + EX31_RS10635 0.80 -1.6 41,289 + EX31_RS10635 0.80 -1.4 41,289 + EX31_RS10635 0.80 -1.4 41,289 + EX31_RS10635 0.80 -2.2 41,290 - EX31_RS10635 0.80 +0.6 41,290 - EX31_RS10635 0.80 +1.6 41,291 + EX31_RS10635 0.81 -1.7 41,291 + EX31_RS10635 0.81 +0.6 41,291 + EX31_RS10635 0.81 -0.4 41,292 - EX31_RS10635 0.81 -1.0 41,352 - EX31_RS10635 0.88 +0.3 41,381 + -0.1 41,381 + -0.1 41,457 + +0.6 41,495 - +1.1 41,499 + +1.7 41,499 + +1.6 41,499 + +0.0 41,499 + +2.3 41,499 + -0.1 41,499 + +1.1 41,499 + +1.6 41,499 + +0.3 41,499 + +1.6 41,499 + -0.6 41,499 + -0.7 41,499 + +0.4 41,499 + -0.4 41,499 + +0.0 41,499 + +0.3 41,500 + -2.1 41,500 - +1.3 41,500 - -1.2 41,500 - +3.2 41,500 - +0.6 41,501 + -1.6 41,501 + +0.3 41,501 + +0.4 41,501 + +0.6 41,501 + +0.0 41,501 + -0.1 41,501 + +0.8 41,502 - +1.4 41,502 - -0.7 41,523 + +0.1 41,523 + -0.4 41,547 + +0.2 41,630 + +0.2 41,630 + -0.4 41,689 + +0.6 41,689 + +0.6 41,689 + +0.2 41,759 + -0.6 41,802 - -0.2 41,802 - -0.4 42,033 + EX31_RS10640 0.23 +0.0 42,035 + EX31_RS10640 0.24 -0.4 42,035 + EX31_RS10640 0.24 +0.2 42,036 - EX31_RS10640 0.24 +2.0 42,076 + EX31_RS10640 0.26 +0.3 42,171 - EX31_RS10640 0.33 +0.9 42,182 + EX31_RS10640 0.34 +0.6 42,239 + EX31_RS10640 0.38 +1.4 42,239 + EX31_RS10640 0.38 -1.4 42,239 + EX31_RS10640 0.38 +2.2 42,240 - EX31_RS10640 0.38 -0.4 42,240 - EX31_RS10640 0.38 -0.3 42,262 + EX31_RS10640 0.39 -1.7 42,262 + EX31_RS10640 0.39 +1.1 42,262 + EX31_RS10640 0.39 -0.0 42,262 + EX31_RS10640 0.39 +0.1 42,263 - EX31_RS10640 0.39 +0.6 42,267 + EX31_RS10640 0.40 +0.2 42,305 + EX31_RS10640 0.42 -0.1 42,605 - EX31_RS10640 0.63 +0.6 42,605 - EX31_RS10640 0.63 -1.0 42,770 + EX31_RS10640 0.75 +0.6 42,805 - EX31_RS10640 0.77 -0.4 42,884 + EX31_RS10640 0.82 -1.3 42,884 + EX31_RS10640 0.82 +0.9 42,885 - EX31_RS10640 0.83 +1.0 42,998 - -1.2 43,025 - -0.5 43,034 + +2.6 43,091 + +0.2 43,129 + +0.8 43,134 + +1.0 43,147 + -0.7 43,150 + +0.6 43,155 + +0.6 43,157 + +0.3 43,158 - -0.8 43,163 + -0.2 43,216 - -1.0 43,218 + -0.5 43,249 - +0.9 43,325 - +1.1 43,464 + +0.7 43,465 - -0.2 43,475 - -1.7 43,571 + -0.4 43,571 + +0.6 43,571 + -1.2 43,571 + -0.7 43,571 + +2.6 43,572 - +0.6 43,572 - -1.1 43,572 - +1.8 43,573 + +0.0 43,573 + +0.1 43,573 + -1.7 43,573 + -1.9 43,573 + -0.8 43,573 + -0.1 43,573 + +0.4 43,573 + +0.2 43,574 - +0.9 43,574 - +0.9 43,574 - -2.2 43,574 - +1.3 43,584 + -0.6 43,584 + +1.6 43,604 + +0.2 43,604 + -0.4 43,604 + -0.2 43,604 + -2.4 43,604 + +0.9 43,604 + +0.6 43,604 + +0.3 43,604 + +0.5 43,604 + +1.6 43,605 - -1.2 43,605 - -0.2 43,605 - +0.1 43,605 - -0.7 43,605 - +0.6 43,628 + +0.0 43,628 + -0.4 43,628 + +0.8 43,628 + +0.2 43,629 - -0.8 43,634 - +0.6 43,634 - +0.6 43,643 + -0.7 43,643 + +1.0 43,643 + +0.6 43,643 + +0.6 43,650 + +0.7 43,686 - +0.6 43,781 - +1.9 43,841 - -0.5 43,857 + +2.2 43,859 + -0.2 44,056 + EX31_RS10645 0.18 -0.7 44,056 + EX31_RS10645 0.18 +0.0 44,057 - EX31_RS10645 0.18 -0.4 44,077 - EX31_RS10645 0.20 +1.2 44,126 - EX31_RS10645 0.23 +0.6
Or see this region's nucleotide sequence