Experiment: D-Mannitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS10280 and EX31_RS10285 are separated by 35 nucleotides EX31_RS10285 and EX31_RS10290 are separated by 2 nucleotides EX31_RS10290 and EX31_RS10295 are separated by 36 nucleotides
EX31_RS10280: EX31_RS10280 - alpha-glucosidase, at 269,514 to 270,875
_RS10280
EX31_RS10285: EX31_RS10285 - carbohydrate ABC transporter permease, at 270,911 to 271,756
_RS10285
EX31_RS10290: EX31_RS10290 - sugar ABC transporter permease, at 271,759 to 272,739
_RS10290
EX31_RS10295: EX31_RS10295 - ABC transporter substrate-binding protein, at 272,776 to 274,041
_RS10295
Position (kb) 271
272
273 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 270.821 kb on + strand at 270.856 kb on - strand at 270.875 kb on + strand at 270.964 kb on + strand at 270.964 kb on + strand at 270.965 kb on - strand at 271.057 kb on + strand, within EX31_RS10285 at 271.057 kb on + strand, within EX31_RS10285 at 271.058 kb on - strand, within EX31_RS10285 at 271.118 kb on - strand, within EX31_RS10285 at 271.118 kb on - strand, within EX31_RS10285 at 271.268 kb on - strand, within EX31_RS10285 at 271.288 kb on + strand, within EX31_RS10285 at 271.289 kb on - strand, within EX31_RS10285 at 271.315 kb on - strand, within EX31_RS10285 at 271.344 kb on + strand, within EX31_RS10285 at 271.344 kb on + strand, within EX31_RS10285 at 271.345 kb on - strand, within EX31_RS10285 at 271.345 kb on - strand, within EX31_RS10285 at 271.375 kb on + strand, within EX31_RS10285 at 271.375 kb on + strand, within EX31_RS10285 at 271.376 kb on - strand, within EX31_RS10285 at 271.535 kb on - strand, within EX31_RS10285 at 271.578 kb on + strand, within EX31_RS10285 at 271.578 kb on + strand, within EX31_RS10285 at 271.579 kb on - strand, within EX31_RS10285 at 271.641 kb on - strand, within EX31_RS10285 at 271.641 kb on - strand, within EX31_RS10285 at 271.662 kb on + strand, within EX31_RS10285 at 271.663 kb on - strand, within EX31_RS10285 at 271.663 kb on - strand, within EX31_RS10285 at 271.761 kb on - strand at 271.761 kb on - strand at 271.936 kb on - strand, within EX31_RS10290 at 271.937 kb on + strand, within EX31_RS10290 at 271.938 kb on - strand, within EX31_RS10290 at 271.938 kb on - strand, within EX31_RS10290 at 271.938 kb on - strand, within EX31_RS10290 at 272.072 kb on + strand, within EX31_RS10290 at 272.209 kb on - strand, within EX31_RS10290 at 272.469 kb on - strand, within EX31_RS10290 at 272.471 kb on + strand, within EX31_RS10290 at 272.498 kb on + strand, within EX31_RS10290 at 272.499 kb on - strand, within EX31_RS10290 at 272.499 kb on - strand, within EX31_RS10290 at 272.561 kb on + strand, within EX31_RS10290 at 272.653 kb on + strand at 272.796 kb on + strand at 272.797 kb on - strand at 272.867 kb on + strand at 272.867 kb on + strand at 272.868 kb on - strand at 272.868 kb on - strand at 272.868 kb on - strand at 272.879 kb on + strand at 272.880 kb on - strand at 272.904 kb on - strand, within EX31_RS10295 at 272.904 kb on - strand, within EX31_RS10295 at 272.973 kb on - strand, within EX31_RS10295 at 273.006 kb on - strand, within EX31_RS10295 at 273.154 kb on - strand, within EX31_RS10295 at 273.245 kb on + strand, within EX31_RS10295 at 273.246 kb on - strand, within EX31_RS10295 at 273.246 kb on - strand, within EX31_RS10295 at 273.311 kb on + strand, within EX31_RS10295 at 273.312 kb on - strand, within EX31_RS10295 at 273.316 kb on + strand, within EX31_RS10295 at 273.316 kb on + strand, within EX31_RS10295 at 273.316 kb on + strand, within EX31_RS10295 at 273.316 kb on + strand, within EX31_RS10295 at 273.316 kb on + strand, within EX31_RS10295 at 273.317 kb on - strand, within EX31_RS10295 at 273.317 kb on - strand, within EX31_RS10295 at 273.411 kb on + strand, within EX31_RS10295 at 273.412 kb on - strand, within EX31_RS10295 at 273.418 kb on - strand, within EX31_RS10295 at 273.476 kb on + strand, within EX31_RS10295 at 273.477 kb on - strand, within EX31_RS10295 at 273.556 kb on - strand, within EX31_RS10295 at 273.596 kb on + strand, within EX31_RS10295 at 273.644 kb on + strand, within EX31_RS10295 at 273.644 kb on + strand, within EX31_RS10295 at 273.644 kb on + strand, within EX31_RS10295 at 273.644 kb on + strand, within EX31_RS10295 at 273.645 kb on - strand, within EX31_RS10295 at 273.730 kb on - strand, within EX31_RS10295
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannitol (C) remove 270,821 + -0.3 270,856 - +0.3 270,875 + +0.5 270,964 + +0.6 270,964 + -0.7 270,965 - +2.6 271,057 + EX31_RS10285 0.17 +1.1 271,057 + EX31_RS10285 0.17 -0.8 271,058 - EX31_RS10285 0.17 +0.5 271,118 - EX31_RS10285 0.24 +0.5 271,118 - EX31_RS10285 0.24 +0.1 271,268 - EX31_RS10285 0.42 +0.9 271,288 + EX31_RS10285 0.45 +2.5 271,289 - EX31_RS10285 0.45 -0.9 271,315 - EX31_RS10285 0.48 -1.1 271,344 + EX31_RS10285 0.51 -1.1 271,344 + EX31_RS10285 0.51 -0.9 271,345 - EX31_RS10285 0.51 -1.2 271,345 - EX31_RS10285 0.51 -1.5 271,375 + EX31_RS10285 0.55 +1.1 271,375 + EX31_RS10285 0.55 -1.1 271,376 - EX31_RS10285 0.55 -3.7 271,535 - EX31_RS10285 0.74 +0.8 271,578 + EX31_RS10285 0.79 -0.5 271,578 + EX31_RS10285 0.79 +1.5 271,579 - EX31_RS10285 0.79 -0.1 271,641 - EX31_RS10285 0.86 -1.5 271,641 - EX31_RS10285 0.86 +0.5 271,662 + EX31_RS10285 0.89 +0.5 271,663 - EX31_RS10285 0.89 +0.1 271,663 - EX31_RS10285 0.89 +1.3 271,761 - +0.7 271,761 - -0.5 271,936 - EX31_RS10290 0.18 -1.1 271,937 + EX31_RS10290 0.18 +0.5 271,938 - EX31_RS10290 0.18 -0.3 271,938 - EX31_RS10290 0.18 +0.5 271,938 - EX31_RS10290 0.18 +1.0 272,072 + EX31_RS10290 0.32 +0.7 272,209 - EX31_RS10290 0.46 -1.5 272,469 - EX31_RS10290 0.72 +0.5 272,471 + EX31_RS10290 0.73 +2.8 272,498 + EX31_RS10290 0.75 +0.1 272,499 - EX31_RS10290 0.75 -0.1 272,499 - EX31_RS10290 0.75 +0.5 272,561 + EX31_RS10290 0.82 +1.6 272,653 + -0.5 272,796 + +0.8 272,797 - -0.9 272,867 + +1.2 272,867 + +0.5 272,868 - +2.1 272,868 - -0.9 272,868 - +0.9 272,879 + -0.2 272,880 - -0.5 272,904 - EX31_RS10295 0.10 +0.6 272,904 - EX31_RS10295 0.10 +0.1 272,973 - EX31_RS10295 0.16 +0.7 273,006 - EX31_RS10295 0.18 -1.5 273,154 - EX31_RS10295 0.30 +1.6 273,245 + EX31_RS10295 0.37 -2.5 273,246 - EX31_RS10295 0.37 -0.8 273,246 - EX31_RS10295 0.37 -0.1 273,311 + EX31_RS10295 0.42 -0.8 273,312 - EX31_RS10295 0.42 +2.5 273,316 + EX31_RS10295 0.43 -0.0 273,316 + EX31_RS10295 0.43 -0.3 273,316 + EX31_RS10295 0.43 +1.5 273,316 + EX31_RS10295 0.43 -0.0 273,316 + EX31_RS10295 0.43 +2.1 273,317 - EX31_RS10295 0.43 +1.7 273,317 - EX31_RS10295 0.43 +0.5 273,411 + EX31_RS10295 0.50 -0.9 273,412 - EX31_RS10295 0.50 +2.1 273,418 - EX31_RS10295 0.51 -0.1 273,476 + EX31_RS10295 0.55 -0.2 273,477 - EX31_RS10295 0.55 -0.2 273,556 - EX31_RS10295 0.62 -1.5 273,596 + EX31_RS10295 0.65 +0.1 273,644 + EX31_RS10295 0.69 -0.3 273,644 + EX31_RS10295 0.69 +0.1 273,644 + EX31_RS10295 0.69 +0.5 273,644 + EX31_RS10295 0.69 +1.2 273,645 - EX31_RS10295 0.69 +0.2 273,730 - EX31_RS10295 0.75 +0.1
Or see this region's nucleotide sequence