Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS20455

Experiment: Gly-DL-Asp (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gly-DL-Asp (N)
5,056,352	-		CA265_RS20450	0.28	-0.8
5,056,378	+		CA265_RS20450	0.30	+1.0
5,056,419	-		CA265_RS20450	0.33	+0.8
5,056,469	-		CA265_RS20450	0.37	+0.0
5,056,469	-		CA265_RS20450	0.37	+0.0
5,056,475	-		CA265_RS20450	0.37	+0.2
5,056,530	+		CA265_RS20450	0.42	-1.0
5,056,531	-		CA265_RS20450	0.42	-0.8
5,056,555	+		CA265_RS20450	0.43	+0.4
5,056,631	+		CA265_RS20450	0.49	+1.3
5,056,711	-		CA265_RS20450	0.55	+0.9
5,056,752	-		CA265_RS20450	0.58	+0.1
5,056,756	+		CA265_RS20450	0.58	+0.2
5,056,757	-		CA265_RS20450	0.58	-0.4
5,056,779	-		CA265_RS20450	0.60	+0.2
5,056,921	+		CA265_RS20450	0.70	-0.6
5,056,940	-		CA265_RS20450	0.72	+0.3
5,056,943	-		CA265_RS20450	0.72	-0.9
5,056,977	-		CA265_RS20450	0.74	+0.3
5,056,979	+		CA265_RS20450	0.75	+0.6
5,057,011	+		CA265_RS20450	0.77	-0.1
5,057,098	+		CA265_RS20450	0.83	+0.2
5,057,099	-		CA265_RS20450	0.83	+0.0
5,057,162	+		CA265_RS20450	0.88	+0.0
5,057,162	+		CA265_RS20450	0.88	-1.4
5,057,163	-		CA265_RS20450	0.88	+0.5
5,057,212	+				+0.4
5,057,244	-				+0.2
5,057,253	+				-0.4
5,057,267	+				+1.1
5,057,268	-				-0.5
5,057,318	+				+0.5
5,057,434	+				-0.0
5,057,455	+				-0.2
5,057,526	+				+0.0
5,057,526	+				+0.6
5,057,527	-				+0.1
5,057,527	-				-0.6
5,057,527	-				-0.6
5,057,527	-				-0.8
5,057,584	-				-0.5
5,057,599	+				-0.4
5,057,599	+				+0.9
5,057,600	-				-0.1
5,057,604	-				+0.2
5,057,606	+				-0.3
5,057,606	+				-0.1
5,057,607	-				-0.9
5,057,613	+				-0.2
5,057,614	-				-0.3
5,057,614	-				-0.4
5,057,629	-				-0.3
5,057,690	-		CA265_RS20455	0.12	-0.4
5,057,716	-		CA265_RS20455	0.13	+0.6
5,057,720	-		CA265_RS20455	0.13	+1.7
5,057,720	-		CA265_RS20455	0.13	-0.2
5,057,763	+		CA265_RS20455	0.15	+0.1
5,057,763	+		CA265_RS20455	0.15	-0.3
5,057,767	+		CA265_RS20455	0.15	+0.5
5,057,767	+		CA265_RS20455	0.15	+0.2
5,057,767	+		CA265_RS20455	0.15	+0.2
5,057,767	+		CA265_RS20455	0.15	+0.5
5,057,767	+		CA265_RS20455	0.15	+1.2
5,057,768	-		CA265_RS20455	0.15	+0.2
5,057,808	+		CA265_RS20455	0.16	+0.4
5,057,809	-		CA265_RS20455	0.16	-1.3
5,057,813	+		CA265_RS20455	0.17	+0.5
5,057,814	-		CA265_RS20455	0.17	-0.6
5,057,872	-		CA265_RS20455	0.19	-0.9
5,057,959	+		CA265_RS20455	0.22	+0.5
5,058,007	+		CA265_RS20455	0.24	+0.1
5,058,007	+		CA265_RS20455	0.24	-0.2
5,058,007	+		CA265_RS20455	0.24	+0.0
5,058,010	-		CA265_RS20455	0.24	+1.9
5,058,010	-		CA265_RS20455	0.24	-0.2
5,058,031	+		CA265_RS20455	0.24	+1.4
5,058,055	+		CA265_RS20455	0.25	-1.6
5,058,087	+		CA265_RS20455	0.27	+0.8
5,058,154	+		CA265_RS20455	0.29	+1.2
5,058,281	-		CA265_RS20455	0.34	-0.2
5,058,284	+		CA265_RS20455	0.34	-0.4
5,058,284	+		CA265_RS20455	0.34	-0.7
5,058,369	+		CA265_RS20455	0.37	-0.3
5,058,369	+		CA265_RS20455	0.37	-0.2
5,058,370	-		CA265_RS20455	0.37	+0.7
5,058,372	+		CA265_RS20455	0.37	+0.8
5,058,372	+		CA265_RS20455	0.37	+0.2
5,058,381	+		CA265_RS20455	0.37	+0.5
5,058,410	+		CA265_RS20455	0.38	+0.4
5,058,411	-		CA265_RS20455	0.38	-0.6
5,058,415	+		CA265_RS20455	0.38	+0.7
5,058,437	+		CA265_RS20455	0.39	+0.1
5,058,506	+		CA265_RS20455	0.42	+0.8
5,058,507	-		CA265_RS20455	0.42	-2.5
5,058,610	+		CA265_RS20455	0.45	+0.7
5,058,682	+		CA265_RS20455	0.48	-0.1
5,058,731	+		CA265_RS20455	0.50	+0.6
5,058,732	-		CA265_RS20455	0.50	+1.0
5,058,747	+		CA265_RS20455	0.50	-0.7
5,058,747	+		CA265_RS20455	0.50	-0.9
5,058,752	+		CA265_RS20455	0.51	+1.1
5,058,756	+		CA265_RS20455	0.51	+0.4
5,058,757	-		CA265_RS20455	0.51	-1.3
5,058,908	-		CA265_RS20455	0.56	-0.0
5,058,908	-		CA265_RS20455	0.56	+0.1
5,058,914	+		CA265_RS20455	0.56	-0.7
5,058,915	-		CA265_RS20455	0.56	-0.7
5,058,915	-		CA265_RS20455	0.56	+1.2
5,058,915	-		CA265_RS20455	0.56	+0.4
5,058,916	+		CA265_RS20455	0.56	+1.2
5,058,940	+		CA265_RS20455	0.57	+0.1
5,058,940	+		CA265_RS20455	0.57	-0.1
5,059,004	+		CA265_RS20455	0.60	-0.1
5,059,004	+		CA265_RS20455	0.60	+1.2
5,059,041	-		CA265_RS20455	0.61	+1.4
5,059,091	-		CA265_RS20455	0.63	+0.2
5,059,161	-		CA265_RS20455	0.65	-0.5
5,059,161	-		CA265_RS20455	0.65	+1.2
5,059,163	-		CA265_RS20455	0.65	+1.0
5,059,166	-		CA265_RS20455	0.65	-0.4
5,059,173	+		CA265_RS20455	0.66	+0.2
5,059,201	-		CA265_RS20455	0.67	-0.9
5,059,203	-		CA265_RS20455	0.67	+0.0
5,059,212	+		CA265_RS20455	0.67	-0.0
5,059,275	+		CA265_RS20455	0.69	+0.1
5,059,275	+		CA265_RS20455	0.69	+0.5
5,059,276	-		CA265_RS20455	0.69	-2.1
5,059,368	-		CA265_RS20455	0.73	+0.4
5,059,406	+		CA265_RS20455	0.74	-0.9
5,059,407	-		CA265_RS20455	0.74	-0.3
5,059,442	-		CA265_RS20455	0.75	-0.3
5,059,443	+		CA265_RS20455	0.75	+1.5
5,059,444	-		CA265_RS20455	0.75	-0.2
5,059,444	-		CA265_RS20455	0.75	+0.3
5,059,448	+		CA265_RS20455	0.76	-0.7
5,059,448	+		CA265_RS20455	0.76	+0.5
5,059,449	-		CA265_RS20455	0.76	+0.0
5,059,483	+		CA265_RS20455	0.77	-2.2
5,059,484	-		CA265_RS20455	0.77	-0.5
5,059,535	+		CA265_RS20455	0.79	+0.2
5,059,652	-		CA265_RS20455	0.83	-0.4
5,059,692	-		CA265_RS20455	0.84	-2.6
5,059,692	-		CA265_RS20455	0.84	-1.9
5,059,770	+		CA265_RS20455	0.87	+0.2
5,059,770	+		CA265_RS20455	0.87	+0.3
5,059,778	+		CA265_RS20455	0.88	-0.9
5,059,778	+		CA265_RS20455	0.88	-0.4
5,059,779	-		CA265_RS20455	0.88	+0.0
5,059,779	-		CA265_RS20455	0.88	+0.4
5,059,779	-		CA265_RS20455	0.88	-1.7
5,059,780	+		CA265_RS20455	0.88	-0.4
5,059,919	+				+0.3
5,059,947	+				+0.3
5,060,006	+				+0.0
5,060,021	+				+0.5
5,060,021	+				+0.7
5,060,022	-				+0.0
5,060,022	-				-0.1
5,060,022	-				-0.3
5,060,085	+				+0.6
5,060,086	-				-0.9
5,060,100	-				+0.5
5,060,115	-				-1.1
5,060,127	+				-0.1
5,060,127	+				-0.1
5,060,127	+				-0.1
5,060,132	-				+1.1
5,060,138	+				+0.1
5,060,188	+				+0.0
5,060,221	+				+0.0
5,060,250	+		CA265_RS20460	0.11	-0.1
5,060,250	+		CA265_RS20460	0.11	+0.7
5,060,268	-		CA265_RS20460	0.13	-2.4
5,060,270	+		CA265_RS20460	0.13	+0.4
5,060,403	+		CA265_RS20460	0.25	-0.6
5,060,407	-		CA265_RS20460	0.25	-0.3
5,060,499	-				+2.6
5,060,501	+		CA265_RS20460	0.34	-0.8
5,060,507	-		CA265_RS20460	0.34	+0.0
5,060,621	+		CA265_RS20460	0.45	+0.3
5,060,624	+		CA265_RS20460	0.45	+0.3
5,060,624	+		CA265_RS20460	0.45	+0.9
5,060,625	-		CA265_RS20460	0.45	+0.1
5,060,625	-		CA265_RS20460	0.45	+0.2
5,060,626	+		CA265_RS20460	0.45	+0.6
5,060,709	+		CA265_RS20460	0.53	+1.2
5,060,710	-		CA265_RS20460	0.53	-0.6
5,060,710	-		CA265_RS20460	0.53	+1.4
5,060,739	+		CA265_RS20460	0.56	-0.8
5,060,740	-		CA265_RS20460	0.56	-0.2
5,060,746	+		CA265_RS20460	0.56	+0.1
5,060,750	+		CA265_RS20460	0.57	-0.3
5,060,750	+		CA265_RS20460	0.57	-0.3
5,060,805	-		CA265_RS20460	0.62	-1.3
5,060,805	-		CA265_RS20460	0.62	+0.5
5,060,873	-		CA265_RS20460	0.68	-1.8
5,060,886	+		CA265_RS20460	0.69	+0.4
5,060,974	+		CA265_RS20460	0.77	-0.1
5,060,979	-		CA265_RS20460	0.78	+0.6
5,061,045	+		CA265_RS20460	0.84	-0.3
5,061,046	-		CA265_RS20460	0.84	+0.3
5,061,046	-		CA265_RS20460	0.84	-0.8
5,061,070	+		CA265_RS20460	0.86	-1.8
5,061,075	-		CA265_RS20460	0.86	-0.4
5,061,099	+		CA265_RS20460	0.88	+0.3
5,061,099	+		CA265_RS20460	0.88	-1.6
5,061,100	-		CA265_RS20460	0.89	+1.1