Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_30160 and AO356_30165 are separated by 975 nucleotides AO356_30165 and AO356_30170 are separated by 459 nucleotides
AO356_30160: AO356_30160 - hypothetical protein, at 7,039,285 to 7,039,632
_30160
AO356_30165: AO356_30165 - hypothetical protein, at 7,040,608 to 7,041,681
_30165
AO356_30170: AO356_30170 - cytochrome B, at 7,042,141 to 7,042,719
_30170
Position (kb)
7040
7041
7042 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 7039.613 kb on + strand at 7039.647 kb on + strand at 7039.648 kb on - strand at 7039.689 kb on + strand at 7039.689 kb on + strand at 7039.766 kb on - strand at 7039.809 kb on + strand at 7039.809 kb on + strand at 7039.855 kb on + strand at 7039.855 kb on + strand at 7039.856 kb on - strand at 7039.860 kb on - strand at 7039.960 kb on - strand at 7040.037 kb on + strand at 7040.118 kb on - strand at 7040.190 kb on + strand at 7040.229 kb on + strand at 7040.284 kb on + strand at 7040.333 kb on + strand at 7040.334 kb on - strand at 7040.464 kb on + strand at 7040.464 kb on + strand at 7040.465 kb on - strand at 7040.465 kb on - strand at 7040.465 kb on - strand at 7040.465 kb on - strand at 7040.467 kb on + strand at 7040.467 kb on + strand at 7040.660 kb on + strand at 7040.660 kb on + strand at 7040.661 kb on - strand at 7040.742 kb on + strand, within AO356_30165 at 7040.876 kb on + strand, within AO356_30165 at 7040.876 kb on + strand, within AO356_30165 at 7040.876 kb on + strand, within AO356_30165 at 7040.939 kb on + strand, within AO356_30165 at 7040.940 kb on - strand, within AO356_30165 at 7040.951 kb on + strand, within AO356_30165 at 7040.956 kb on + strand, within AO356_30165 at 7040.972 kb on + strand, within AO356_30165 at 7040.972 kb on + strand, within AO356_30165 at 7041.072 kb on + strand, within AO356_30165 at 7041.086 kb on + strand, within AO356_30165 at 7041.086 kb on + strand, within AO356_30165 at 7041.087 kb on - strand, within AO356_30165 at 7041.087 kb on - strand, within AO356_30165 at 7041.087 kb on - strand, within AO356_30165 at 7041.087 kb on - strand, within AO356_30165 at 7041.087 kb on - strand, within AO356_30165 at 7041.218 kb on + strand, within AO356_30165 at 7041.381 kb on + strand, within AO356_30165 at 7041.381 kb on + strand, within AO356_30165 at 7041.422 kb on + strand, within AO356_30165 at 7041.423 kb on - strand, within AO356_30165 at 7041.579 kb on - strand at 7041.619 kb on + strand at 7041.620 kb on - strand at 7041.620 kb on - strand at 7041.738 kb on + strand at 7041.739 kb on - strand at 7041.779 kb on + strand at 7041.782 kb on - strand at 7041.787 kb on - strand at 7041.821 kb on - strand at 7041.821 kb on - strand at 7041.821 kb on - strand at 7041.821 kb on - strand at 7041.978 kb on + strand at 7041.978 kb on + strand at 7041.979 kb on - strand at 7042.081 kb on - strand at 7042.081 kb on - strand at 7042.081 kb on - strand at 7042.299 kb on + strand, within AO356_30170 at 7042.300 kb on - strand, within AO356_30170 at 7042.300 kb on - strand, within AO356_30170 at 7042.300 kb on - strand, within AO356_30170 at 7042.300 kb on - strand, within AO356_30170 at 7042.300 kb on - strand, within AO356_30170 at 7042.439 kb on + strand, within AO356_30170 at 7042.439 kb on + strand, within AO356_30170 at 7042.440 kb on - strand, within AO356_30170 at 7042.440 kb on - strand, within AO356_30170 at 7042.598 kb on + strand, within AO356_30170 at 7042.598 kb on + strand, within AO356_30170 at 7042.599 kb on - strand, within AO356_30170
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 7,039,613 + -0.3 7,039,647 + -0.0 7,039,648 - -0.9 7,039,689 + -0.8 7,039,689 + -0.4 7,039,766 - +0.1 7,039,809 + +0.1 7,039,809 + +0.3 7,039,855 + +0.3 7,039,855 + +0.5 7,039,856 - -0.2 7,039,860 - +0.3 7,039,960 - -0.3 7,040,037 + +0.9 7,040,118 - -0.7 7,040,190 + -0.2 7,040,229 + -0.1 7,040,284 + -0.3 7,040,333 + -0.0 7,040,334 - +0.5 7,040,464 + +0.0 7,040,464 + +0.3 7,040,465 - -1.2 7,040,465 - -0.3 7,040,465 - +0.1 7,040,465 - +0.3 7,040,467 + -0.3 7,040,467 + -0.9 7,040,660 + -1.9 7,040,660 + -0.2 7,040,661 - +1.8 7,040,742 + AO356_30165 0.12 -0.5 7,040,876 + AO356_30165 0.25 -0.8 7,040,876 + AO356_30165 0.25 -0.2 7,040,876 + AO356_30165 0.25 +0.2 7,040,939 + AO356_30165 0.31 -1.2 7,040,940 - AO356_30165 0.31 +0.6 7,040,951 + AO356_30165 0.32 +0.7 7,040,956 + AO356_30165 0.32 +0.3 7,040,972 + AO356_30165 0.34 +0.5 7,040,972 + AO356_30165 0.34 -0.6 7,041,072 + AO356_30165 0.43 -2.0 7,041,086 + AO356_30165 0.45 +1.1 7,041,086 + AO356_30165 0.45 -0.1 7,041,087 - AO356_30165 0.45 +0.3 7,041,087 - AO356_30165 0.45 +0.9 7,041,087 - AO356_30165 0.45 -0.4 7,041,087 - AO356_30165 0.45 +0.1 7,041,087 - AO356_30165 0.45 +0.1 7,041,218 + AO356_30165 0.57 +0.1 7,041,381 + AO356_30165 0.72 +1.4 7,041,381 + AO356_30165 0.72 +0.5 7,041,422 + AO356_30165 0.76 -0.6 7,041,423 - AO356_30165 0.76 -0.7 7,041,579 - +0.7 7,041,619 + -0.2 7,041,620 - +0.5 7,041,620 - +0.1 7,041,738 + +0.6 7,041,739 - +0.6 7,041,779 + -0.3 7,041,782 - +0.4 7,041,787 - -0.2 7,041,821 - -0.1 7,041,821 - +0.8 7,041,821 - +0.3 7,041,821 - +0.5 7,041,978 + +0.2 7,041,978 + -1.2 7,041,979 - -0.3 7,042,081 - -0.1 7,042,081 - -0.0 7,042,081 - +0.5 7,042,299 + AO356_30170 0.27 +0.8 7,042,300 - AO356_30170 0.27 +0.7 7,042,300 - AO356_30170 0.27 +0.2 7,042,300 - AO356_30170 0.27 -1.4 7,042,300 - AO356_30170 0.27 +0.4 7,042,300 - AO356_30170 0.27 -0.4 7,042,439 + AO356_30170 0.51 +1.7 7,042,439 + AO356_30170 0.51 +0.4 7,042,440 - AO356_30170 0.52 -0.1 7,042,440 - AO356_30170 0.52 +0.0 7,042,598 + AO356_30170 0.79 -1.6 7,042,598 + AO356_30170 0.79 -0.0 7,042,599 - AO356_30170 0.79 -0.8
Or see this region's nucleotide sequence