Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25450 and AO356_25455 are separated by 26 nucleotides AO356_25455 and AO356_25460 are separated by 196 nucleotides
AO356_25450: AO356_25450 - LysR family transcriptional regulator, at 5,754,153 to 5,755,094
_25450
AO356_25455: AO356_25455 - transcriptional regulator, at 5,755,121 to 5,756,140
_25455
AO356_25460: AO356_25460 - sulfonate ABC transporter substrate-binding protein, at 5,756,337 to 5,757,344
_25460
Position (kb) 5755
5756
5757 Strain fitness (log2 ratio) -2
-1
0
1 at 5754.152 kb on + strand at 5754.152 kb on + strand at 5754.152 kb on + strand at 5754.153 kb on - strand at 5754.489 kb on + strand, within AO356_25450 at 5754.751 kb on + strand, within AO356_25450 at 5754.897 kb on + strand, within AO356_25450 at 5754.897 kb on + strand, within AO356_25450 at 5755.326 kb on + strand, within AO356_25455 at 5755.327 kb on - strand, within AO356_25455 at 5756.075 kb on + strand at 5756.237 kb on + strand at 5756.238 kb on - strand at 5756.238 kb on - strand at 5756.238 kb on - strand at 5756.238 kb on - strand at 5756.695 kb on - strand, within AO356_25460 at 5756.946 kb on + strand, within AO356_25460 at 5756.991 kb on + strand, within AO356_25460 at 5756.991 kb on + strand, within AO356_25460 at 5756.992 kb on - strand, within AO356_25460 at 5756.992 kb on - strand, within AO356_25460 at 5756.992 kb on - strand, within AO356_25460 at 5757.030 kb on + strand, within AO356_25460 at 5757.069 kb on + strand, within AO356_25460 at 5757.070 kb on - strand, within AO356_25460 at 5757.081 kb on + strand, within AO356_25460 at 5757.081 kb on + strand, within AO356_25460 at 5757.081 kb on + strand, within AO356_25460 at 5757.082 kb on - strand, within AO356_25460 at 5757.082 kb on - strand, within AO356_25460
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 5,754,152 + +0.7 5,754,152 + +0.2 5,754,152 + -0.3 5,754,153 - -0.0 5,754,489 + AO356_25450 0.36 -0.8 5,754,751 + AO356_25450 0.63 -0.6 5,754,897 + AO356_25450 0.79 -0.4 5,754,897 + AO356_25450 0.79 +0.3 5,755,326 + AO356_25455 0.20 -0.4 5,755,327 - AO356_25455 0.20 -1.9 5,756,075 + +0.1 5,756,237 + -0.2 5,756,238 - +0.6 5,756,238 - +0.8 5,756,238 - -0.3 5,756,238 - -0.1 5,756,695 - AO356_25460 0.36 +0.2 5,756,946 + AO356_25460 0.60 -0.0 5,756,991 + AO356_25460 0.65 +0.4 5,756,991 + AO356_25460 0.65 +0.4 5,756,992 - AO356_25460 0.65 -1.2 5,756,992 - AO356_25460 0.65 +0.7 5,756,992 - AO356_25460 0.65 -0.2 5,757,030 + AO356_25460 0.69 -0.5 5,757,069 + AO356_25460 0.73 +1.1 5,757,070 - AO356_25460 0.73 -0.4 5,757,081 + AO356_25460 0.74 -0.0 5,757,081 + AO356_25460 0.74 +0.3 5,757,081 + AO356_25460 0.74 +0.3 5,757,082 - AO356_25460 0.74 -0.7 5,757,082 - AO356_25460 0.74 +0.9
Or see this region's nucleotide sequence