Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22565 and AO356_22570 are separated by 340 nucleotides AO356_22570 and AO356_22580 are separated by 817 nucleotides
AO356_22565: AO356_22565 - hypothetical protein, at 5,044,230 to 5,044,502
_22565
AO356_22570: AO356_22570 - hypothetical protein, at 5,044,843 to 5,045,802
_22570
AO356_22580: AO356_22580 - cytochrome C, at 5,046,620 to 5,047,000
_22580
Position (kb)
5044
5045
5046 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5043.872 kb on + strand at 5043.945 kb on + strand at 5043.946 kb on - strand at 5043.949 kb on + strand at 5043.950 kb on - strand at 5043.950 kb on - strand at 5043.950 kb on - strand at 5043.994 kb on - strand at 5043.994 kb on - strand at 5043.994 kb on - strand at 5043.994 kb on - strand at 5044.006 kb on + strand at 5044.053 kb on + strand at 5044.075 kb on + strand at 5044.076 kb on - strand at 5044.085 kb on + strand at 5044.085 kb on + strand at 5044.085 kb on + strand at 5044.086 kb on - strand at 5044.086 kb on - strand at 5044.163 kb on + strand at 5044.164 kb on - strand at 5044.164 kb on - strand at 5044.164 kb on - strand at 5044.164 kb on - strand at 5044.164 kb on - strand at 5044.166 kb on + strand at 5044.166 kb on + strand at 5044.167 kb on - strand at 5044.378 kb on - strand, within AO356_22565 at 5044.378 kb on - strand, within AO356_22565 at 5044.492 kb on + strand at 5044.492 kb on + strand at 5044.492 kb on + strand at 5044.492 kb on + strand at 5044.492 kb on + strand at 5044.492 kb on + strand at 5044.492 kb on + strand at 5044.492 kb on + strand at 5044.492 kb on + strand at 5044.493 kb on - strand at 5044.493 kb on - strand at 5044.493 kb on - strand at 5044.493 kb on - strand at 5044.493 kb on - strand at 5044.493 kb on - strand at 5044.522 kb on - strand at 5044.531 kb on - strand at 5044.586 kb on + strand at 5044.586 kb on + strand at 5044.586 kb on + strand at 5044.586 kb on + strand at 5044.586 kb on + strand at 5044.587 kb on - strand at 5044.587 kb on - strand at 5044.587 kb on - strand at 5044.636 kb on - strand at 5044.696 kb on + strand at 5044.696 kb on + strand at 5044.697 kb on - strand at 5044.697 kb on - strand at 5044.697 kb on - strand at 5044.850 kb on + strand at 5044.850 kb on + strand at 5044.850 kb on + strand at 5044.935 kb on - strand at 5045.030 kb on + strand, within AO356_22570 at 5045.030 kb on + strand, within AO356_22570 at 5045.030 kb on + strand, within AO356_22570 at 5045.086 kb on + strand, within AO356_22570 at 5045.087 kb on - strand, within AO356_22570 at 5045.087 kb on - strand, within AO356_22570 at 5045.151 kb on + strand, within AO356_22570 at 5045.152 kb on - strand, within AO356_22570 at 5045.428 kb on + strand, within AO356_22570 at 5045.428 kb on + strand, within AO356_22570 at 5045.430 kb on + strand, within AO356_22570 at 5045.431 kb on - strand, within AO356_22570 at 5045.431 kb on - strand, within AO356_22570 at 5045.431 kb on - strand, within AO356_22570 at 5045.431 kb on - strand, within AO356_22570 at 5045.465 kb on + strand, within AO356_22570 at 5045.466 kb on - strand, within AO356_22570 at 5045.672 kb on - strand, within AO356_22570 at 5045.672 kb on - strand, within AO356_22570 at 5045.672 kb on - strand, within AO356_22570 at 5045.672 kb on - strand, within AO356_22570 at 5045.745 kb on + strand at 5045.745 kb on + strand at 5045.745 kb on + strand at 5045.878 kb on + strand at 5045.878 kb on + strand at 5045.879 kb on - strand at 5045.879 kb on - strand at 5045.879 kb on - strand at 5045.879 kb on - strand at 5045.921 kb on + strand at 5045.921 kb on + strand at 5045.921 kb on + strand at 5045.921 kb on + strand at 5045.921 kb on + strand at 5045.922 kb on - strand at 5045.922 kb on - strand at 5045.922 kb on - strand at 5045.922 kb on - strand at 5045.922 kb on - strand at 5045.922 kb on - strand at 5045.998 kb on + strand at 5045.998 kb on + strand at 5045.999 kb on - strand at 5045.999 kb on - strand at 5046.136 kb on - strand at 5046.136 kb on - strand at 5046.136 kb on - strand at 5046.183 kb on - strand at 5046.183 kb on - strand at 5046.351 kb on + strand at 5046.352 kb on - strand at 5046.352 kb on - strand at 5046.483 kb on + strand at 5046.516 kb on - strand at 5046.522 kb on + strand at 5046.534 kb on + strand at 5046.592 kb on + strand at 5046.615 kb on + strand at 5046.648 kb on + strand at 5046.648 kb on + strand at 5046.648 kb on + strand at 5046.648 kb on + strand at 5046.648 kb on + strand at 5046.648 kb on + strand at 5046.649 kb on - strand at 5046.649 kb on - strand at 5046.649 kb on - strand at 5046.649 kb on - strand at 5046.649 kb on - strand at 5046.649 kb on - strand at 5046.752 kb on + strand, within AO356_22580
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 5,043,872 + +0.2 5,043,945 + -0.4 5,043,946 - +0.2 5,043,949 + -0.5 5,043,950 - +1.0 5,043,950 - +0.9 5,043,950 - -0.0 5,043,994 - -0.3 5,043,994 - -0.9 5,043,994 - +0.2 5,043,994 - -2.4 5,044,006 + +0.2 5,044,053 + +0.7 5,044,075 + +0.2 5,044,076 - +0.7 5,044,085 + -0.3 5,044,085 + -0.2 5,044,085 + +0.2 5,044,086 - -1.3 5,044,086 - +0.6 5,044,163 + +0.2 5,044,164 - -0.7 5,044,164 - +0.2 5,044,164 - -3.3 5,044,164 - -1.4 5,044,164 - +0.2 5,044,166 + +0.3 5,044,166 + +0.2 5,044,167 - +0.5 5,044,378 - AO356_22565 0.54 +0.3 5,044,378 - AO356_22565 0.54 +0.6 5,044,492 + +0.1 5,044,492 + -0.6 5,044,492 + -0.6 5,044,492 + -0.1 5,044,492 + -0.3 5,044,492 + -1.1 5,044,492 + -0.2 5,044,492 + +1.3 5,044,492 + +0.4 5,044,493 - +0.7 5,044,493 - +0.3 5,044,493 - -0.9 5,044,493 - -0.3 5,044,493 - +0.9 5,044,493 - +0.6 5,044,522 - -0.1 5,044,531 - +0.2 5,044,586 + +0.4 5,044,586 + -0.4 5,044,586 + -0.0 5,044,586 + +0.4 5,044,586 + -1.4 5,044,587 - -1.4 5,044,587 - -0.4 5,044,587 - -0.5 5,044,636 - +0.4 5,044,696 + -0.7 5,044,696 + +0.1 5,044,697 - -0.3 5,044,697 - -0.0 5,044,697 - +1.1 5,044,850 + +0.9 5,044,850 + +0.1 5,044,850 + +0.3 5,044,935 - -0.7 5,045,030 + AO356_22570 0.19 +0.4 5,045,030 + AO356_22570 0.19 -1.2 5,045,030 + AO356_22570 0.19 -1.4 5,045,086 + AO356_22570 0.25 -0.4 5,045,087 - AO356_22570 0.25 -0.6 5,045,087 - AO356_22570 0.25 -0.0 5,045,151 + AO356_22570 0.32 -0.2 5,045,152 - AO356_22570 0.32 -0.1 5,045,428 + AO356_22570 0.61 +1.2 5,045,428 + AO356_22570 0.61 -0.4 5,045,430 + AO356_22570 0.61 -0.6 5,045,431 - AO356_22570 0.61 -0.8 5,045,431 - AO356_22570 0.61 -0.3 5,045,431 - AO356_22570 0.61 -0.1 5,045,431 - AO356_22570 0.61 -0.4 5,045,465 + AO356_22570 0.65 +0.3 5,045,466 - AO356_22570 0.65 +0.2 5,045,672 - AO356_22570 0.86 -0.8 5,045,672 - AO356_22570 0.86 -2.3 5,045,672 - AO356_22570 0.86 +0.1 5,045,672 - AO356_22570 0.86 +0.7 5,045,745 + -0.3 5,045,745 + -0.7 5,045,745 + +0.7 5,045,878 + -0.3 5,045,878 + -0.7 5,045,879 - +0.2 5,045,879 - +0.0 5,045,879 - +0.4 5,045,879 - -2.0 5,045,921 + +0.0 5,045,921 + -0.6 5,045,921 + -0.0 5,045,921 + +0.2 5,045,921 + +0.4 5,045,922 - -0.6 5,045,922 - -0.6 5,045,922 - -0.8 5,045,922 - +0.6 5,045,922 - -0.9 5,045,922 - -0.5 5,045,998 + +0.8 5,045,998 + -0.4 5,045,999 - +0.6 5,045,999 - +0.2 5,046,136 - +0.6 5,046,136 - +0.0 5,046,136 - -0.3 5,046,183 - +0.9 5,046,183 - +0.8 5,046,351 + +0.6 5,046,352 - +0.6 5,046,352 - -0.0 5,046,483 + +1.0 5,046,516 - -0.6 5,046,522 + +0.4 5,046,534 + -0.5 5,046,592 + +0.1 5,046,615 + -0.7 5,046,648 + -0.0 5,046,648 + -0.4 5,046,648 + +0.6 5,046,648 + +0.1 5,046,648 + +0.5 5,046,648 + -0.1 5,046,649 - -0.3 5,046,649 - -0.3 5,046,649 - -0.3 5,046,649 - +0.4 5,046,649 - -2.2 5,046,649 - -0.4 5,046,752 + AO356_22580 0.35 +0.1
Or see this region's nucleotide sequence