Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_21725 and AO356_21730 are separated by 204 nucleotides AO356_21730 and AO356_21735 are separated by 130 nucleotides
AO356_21725: AO356_21725 - MFS transporter, at 4,862,138 to 4,863,760
_21725
AO356_21730: AO356_21730 - choline dehydrogenase, at 4,863,965 to 4,865,608
_21730
AO356_21735: AO356_21735 - LysR family transcriptional regulator, at 4,865,739 to 4,866,623
_21735
Position (kb)
4863
4864
4865
4866 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4863.318 kb on + strand, within AO356_21725 at 4863.318 kb on + strand, within AO356_21725 at 4863.318 kb on + strand, within AO356_21725 at 4863.318 kb on + strand, within AO356_21725 at 4863.318 kb on + strand, within AO356_21725 at 4863.319 kb on - strand, within AO356_21725 at 4863.319 kb on - strand, within AO356_21725 at 4863.319 kb on - strand, within AO356_21725 at 4863.319 kb on - strand, within AO356_21725 at 4863.319 kb on - strand, within AO356_21725 at 4863.319 kb on - strand, within AO356_21725 at 4863.374 kb on + strand, within AO356_21725 at 4863.375 kb on - strand, within AO356_21725 at 4863.414 kb on + strand, within AO356_21725 at 4863.414 kb on + strand, within AO356_21725 at 4863.414 kb on + strand, within AO356_21725 at 4863.414 kb on + strand, within AO356_21725 at 4863.415 kb on - strand, within AO356_21725 at 4863.480 kb on + strand, within AO356_21725 at 4863.480 kb on + strand, within AO356_21725 at 4863.480 kb on + strand, within AO356_21725 at 4863.481 kb on - strand, within AO356_21725 at 4863.481 kb on - strand, within AO356_21725 at 4863.481 kb on - strand, within AO356_21725 at 4863.481 kb on - strand, within AO356_21725 at 4863.639 kb on + strand at 4863.640 kb on - strand at 4863.974 kb on - strand at 4863.974 kb on - strand at 4863.974 kb on - strand at 4864.269 kb on + strand, within AO356_21730 at 4864.269 kb on + strand, within AO356_21730 at 4864.270 kb on - strand, within AO356_21730 at 4864.371 kb on + strand, within AO356_21730 at 4864.371 kb on + strand, within AO356_21730 at 4864.372 kb on - strand, within AO356_21730 at 4864.528 kb on - strand, within AO356_21730 at 4864.617 kb on + strand, within AO356_21730 at 4864.618 kb on - strand, within AO356_21730 at 4864.623 kb on + strand, within AO356_21730 at 4864.624 kb on - strand, within AO356_21730 at 4864.624 kb on - strand, within AO356_21730 at 4864.698 kb on + strand, within AO356_21730 at 4864.699 kb on - strand, within AO356_21730 at 4864.699 kb on - strand, within AO356_21730 at 4864.699 kb on - strand, within AO356_21730 at 4865.050 kb on - strand, within AO356_21730 at 4865.289 kb on + strand, within AO356_21730 at 4865.289 kb on + strand, within AO356_21730 at 4865.290 kb on - strand, within AO356_21730 at 4865.290 kb on - strand, within AO356_21730 at 4865.313 kb on + strand, within AO356_21730 at 4865.314 kb on - strand, within AO356_21730 at 4865.314 kb on - strand, within AO356_21730 at 4865.314 kb on - strand, within AO356_21730 at 4865.314 kb on - strand, within AO356_21730 at 4865.314 kb on - strand, within AO356_21730 at 4865.314 kb on - strand, within AO356_21730 at 4865.314 kb on - strand, within AO356_21730 at 4865.448 kb on + strand at 4865.448 kb on + strand at 4865.476 kb on - strand at 4865.476 kb on - strand at 4865.580 kb on + strand at 4865.580 kb on + strand at 4865.581 kb on - strand at 4865.586 kb on + strand at 4865.586 kb on + strand at 4865.587 kb on - strand at 4865.644 kb on + strand at 4865.645 kb on - strand at 4865.764 kb on - strand at 4865.847 kb on - strand, within AO356_21735 at 4865.904 kb on + strand, within AO356_21735 at 4866.232 kb on - strand, within AO356_21735 at 4866.246 kb on + strand, within AO356_21735 at 4866.246 kb on + strand, within AO356_21735 at 4866.309 kb on + strand, within AO356_21735 at 4866.309 kb on + strand, within AO356_21735 at 4866.310 kb on - strand, within AO356_21735 at 4866.454 kb on - strand, within AO356_21735 at 4866.454 kb on - strand, within AO356_21735 at 4866.454 kb on - strand, within AO356_21735 at 4866.454 kb on - strand, within AO356_21735 at 4866.454 kb on - strand, within AO356_21735 at 4866.454 kb on - strand, within AO356_21735 at 4866.454 kb on - strand, within AO356_21735 at 4866.516 kb on + strand, within AO356_21735 at 4866.517 kb on - strand, within AO356_21735 at 4866.554 kb on - strand at 4866.576 kb on + strand at 4866.576 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 4,863,318 + AO356_21725 0.73 -0.0 4,863,318 + AO356_21725 0.73 -0.4 4,863,318 + AO356_21725 0.73 -0.7 4,863,318 + AO356_21725 0.73 -0.1 4,863,318 + AO356_21725 0.73 +0.3 4,863,319 - AO356_21725 0.73 -0.4 4,863,319 - AO356_21725 0.73 +1.2 4,863,319 - AO356_21725 0.73 +0.3 4,863,319 - AO356_21725 0.73 -0.9 4,863,319 - AO356_21725 0.73 -0.2 4,863,319 - AO356_21725 0.73 +0.7 4,863,374 + AO356_21725 0.76 +0.3 4,863,375 - AO356_21725 0.76 -1.2 4,863,414 + AO356_21725 0.79 -0.4 4,863,414 + AO356_21725 0.79 -0.5 4,863,414 + AO356_21725 0.79 -0.5 4,863,414 + AO356_21725 0.79 +0.7 4,863,415 - AO356_21725 0.79 +0.1 4,863,480 + AO356_21725 0.83 -0.7 4,863,480 + AO356_21725 0.83 +0.9 4,863,480 + AO356_21725 0.83 +1.1 4,863,481 - AO356_21725 0.83 -0.9 4,863,481 - AO356_21725 0.83 -0.1 4,863,481 - AO356_21725 0.83 +0.0 4,863,481 - AO356_21725 0.83 +0.8 4,863,639 + -0.2 4,863,640 - +0.6 4,863,974 - -1.3 4,863,974 - -0.8 4,863,974 - -2.0 4,864,269 + AO356_21730 0.18 -0.3 4,864,269 + AO356_21730 0.18 +0.1 4,864,270 - AO356_21730 0.19 -1.0 4,864,371 + AO356_21730 0.25 -1.5 4,864,371 + AO356_21730 0.25 -0.4 4,864,372 - AO356_21730 0.25 -1.0 4,864,528 - AO356_21730 0.34 +0.2 4,864,617 + AO356_21730 0.40 +2.3 4,864,618 - AO356_21730 0.40 +0.1 4,864,623 + AO356_21730 0.40 -0.8 4,864,624 - AO356_21730 0.40 -0.5 4,864,624 - AO356_21730 0.40 +0.0 4,864,698 + AO356_21730 0.45 -0.0 4,864,699 - AO356_21730 0.45 -0.9 4,864,699 - AO356_21730 0.45 +0.8 4,864,699 - AO356_21730 0.45 +0.1 4,865,050 - AO356_21730 0.66 +0.5 4,865,289 + AO356_21730 0.81 +1.5 4,865,289 + AO356_21730 0.81 -1.4 4,865,290 - AO356_21730 0.81 -0.2 4,865,290 - AO356_21730 0.81 +0.1 4,865,313 + AO356_21730 0.82 -0.9 4,865,314 - AO356_21730 0.82 +1.1 4,865,314 - AO356_21730 0.82 -0.6 4,865,314 - AO356_21730 0.82 -0.2 4,865,314 - AO356_21730 0.82 -0.1 4,865,314 - AO356_21730 0.82 -0.8 4,865,314 - AO356_21730 0.82 +0.4 4,865,314 - AO356_21730 0.82 +0.2 4,865,448 + -0.3 4,865,448 + +0.1 4,865,476 - -1.4 4,865,476 - +0.5 4,865,580 + -0.3 4,865,580 + +0.4 4,865,581 - +1.2 4,865,586 + -0.6 4,865,586 + +0.6 4,865,587 - +0.1 4,865,644 + +0.1 4,865,645 - -0.6 4,865,764 - -1.4 4,865,847 - AO356_21735 0.12 -0.9 4,865,904 + AO356_21735 0.19 -0.3 4,866,232 - AO356_21735 0.56 +0.8 4,866,246 + AO356_21735 0.57 +0.1 4,866,246 + AO356_21735 0.57 +0.3 4,866,309 + AO356_21735 0.64 -0.3 4,866,309 + AO356_21735 0.64 -0.6 4,866,310 - AO356_21735 0.65 -0.4 4,866,454 - AO356_21735 0.81 -0.1 4,866,454 - AO356_21735 0.81 -1.9 4,866,454 - AO356_21735 0.81 +0.7 4,866,454 - AO356_21735 0.81 -0.2 4,866,454 - AO356_21735 0.81 -1.8 4,866,454 - AO356_21735 0.81 -1.4 4,866,454 - AO356_21735 0.81 -1.2 4,866,516 + AO356_21735 0.88 -0.9 4,866,517 - AO356_21735 0.88 +0.6 4,866,554 - +0.7 4,866,576 + +0.6 4,866,576 + -0.5
Or see this region's nucleotide sequence