Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_19125 and AO356_19130 are separated by 177 nucleotides AO356_19130 and AO356_19135 are separated by 446 nucleotides
AO356_19125: AO356_19125 - sorbosone dehydrogenase, at 4,295,277 to 4,296,587
_19125
AO356_19130: AO356_19130 - hypothetical protein, at 4,296,765 to 4,297,349
_19130
AO356_19135: AO356_19135 - cob(I)yrinic acid a,c-diamide adenosyltransferase, at 4,297,796 to 4,298,407
_19135
Position (kb) 4296
4297
4298 Strain fitness (log2 ratio) -1
0
1 at 4295.935 kb on + strand, within AO356_19125 at 4295.935 kb on + strand, within AO356_19125 at 4295.935 kb on + strand, within AO356_19125 at 4295.935 kb on + strand, within AO356_19125 at 4295.936 kb on - strand, within AO356_19125 at 4295.936 kb on - strand, within AO356_19125 at 4295.936 kb on - strand, within AO356_19125 at 4295.936 kb on - strand, within AO356_19125 at 4296.091 kb on + strand, within AO356_19125 at 4296.091 kb on + strand, within AO356_19125 at 4296.091 kb on + strand, within AO356_19125 at 4296.091 kb on + strand, within AO356_19125 at 4296.092 kb on - strand, within AO356_19125 at 4296.092 kb on - strand, within AO356_19125 at 4296.147 kb on + strand, within AO356_19125 at 4296.147 kb on + strand, within AO356_19125 at 4296.147 kb on + strand, within AO356_19125 at 4296.148 kb on - strand, within AO356_19125 at 4296.189 kb on + strand, within AO356_19125 at 4296.189 kb on + strand, within AO356_19125 at 4296.190 kb on - strand, within AO356_19125 at 4296.192 kb on + strand, within AO356_19125 at 4296.192 kb on + strand, within AO356_19125 at 4296.193 kb on - strand, within AO356_19125 at 4296.599 kb on + strand at 4296.600 kb on - strand at 4296.600 kb on - strand at 4296.621 kb on + strand at 4296.621 kb on + strand at 4296.622 kb on - strand at 4296.758 kb on + strand at 4296.758 kb on + strand at 4296.759 kb on - strand at 4296.759 kb on - strand at 4296.759 kb on - strand at 4296.809 kb on - strand at 4296.844 kb on + strand, within AO356_19130 at 4296.853 kb on + strand, within AO356_19130 at 4296.854 kb on - strand, within AO356_19130 at 4296.854 kb on - strand, within AO356_19130 at 4296.854 kb on - strand, within AO356_19130 at 4296.982 kb on + strand, within AO356_19130 at 4296.983 kb on - strand, within AO356_19130 at 4297.165 kb on - strand, within AO356_19130 at 4297.165 kb on - strand, within AO356_19130 at 4297.267 kb on + strand, within AO356_19130 at 4297.268 kb on - strand, within AO356_19130 at 4297.268 kb on - strand, within AO356_19130 at 4297.268 kb on - strand, within AO356_19130 at 4297.278 kb on - strand, within AO356_19130 at 4297.278 kb on - strand, within AO356_19130 at 4297.349 kb on + strand at 4297.349 kb on + strand at 4297.350 kb on - strand at 4297.350 kb on - strand at 4297.350 kb on - strand at 4297.350 kb on - strand at 4297.374 kb on - strand at 4297.437 kb on - strand at 4297.476 kb on - strand at 4297.476 kb on - strand at 4297.603 kb on + strand at 4297.624 kb on + strand at 4298.017 kb on + strand, within AO356_19135 at 4298.017 kb on + strand, within AO356_19135 at 4298.017 kb on + strand, within AO356_19135 at 4298.017 kb on + strand, within AO356_19135 at 4298.018 kb on - strand, within AO356_19135 at 4298.018 kb on - strand, within AO356_19135 at 4298.018 kb on - strand, within AO356_19135 at 4298.018 kb on - strand, within AO356_19135
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 4,295,935 + AO356_19125 0.50 +0.3 4,295,935 + AO356_19125 0.50 -0.6 4,295,935 + AO356_19125 0.50 -0.2 4,295,935 + AO356_19125 0.50 +0.4 4,295,936 - AO356_19125 0.50 +0.1 4,295,936 - AO356_19125 0.50 +0.2 4,295,936 - AO356_19125 0.50 +0.3 4,295,936 - AO356_19125 0.50 -0.8 4,296,091 + AO356_19125 0.62 +0.5 4,296,091 + AO356_19125 0.62 -0.3 4,296,091 + AO356_19125 0.62 +0.0 4,296,091 + AO356_19125 0.62 -0.7 4,296,092 - AO356_19125 0.62 +0.8 4,296,092 - AO356_19125 0.62 -0.3 4,296,147 + AO356_19125 0.66 +0.1 4,296,147 + AO356_19125 0.66 +0.4 4,296,147 + AO356_19125 0.66 +0.3 4,296,148 - AO356_19125 0.66 +0.7 4,296,189 + AO356_19125 0.70 -0.6 4,296,189 + AO356_19125 0.70 +0.2 4,296,190 - AO356_19125 0.70 -0.3 4,296,192 + AO356_19125 0.70 -0.1 4,296,192 + AO356_19125 0.70 -0.5 4,296,193 - AO356_19125 0.70 +1.1 4,296,599 + -0.2 4,296,600 - +0.1 4,296,600 - +0.4 4,296,621 + -0.1 4,296,621 + +1.1 4,296,622 - -0.4 4,296,758 + +0.4 4,296,758 + +0.6 4,296,759 - -1.2 4,296,759 - +1.1 4,296,759 - -0.5 4,296,809 - -0.6 4,296,844 + AO356_19130 0.14 +0.7 4,296,853 + AO356_19130 0.15 +0.1 4,296,854 - AO356_19130 0.15 +0.7 4,296,854 - AO356_19130 0.15 +0.0 4,296,854 - AO356_19130 0.15 +0.4 4,296,982 + AO356_19130 0.37 -0.6 4,296,983 - AO356_19130 0.37 -0.3 4,297,165 - AO356_19130 0.68 -1.4 4,297,165 - AO356_19130 0.68 +0.2 4,297,267 + AO356_19130 0.86 +0.4 4,297,268 - AO356_19130 0.86 -0.4 4,297,268 - AO356_19130 0.86 +0.2 4,297,268 - AO356_19130 0.86 -0.3 4,297,278 - AO356_19130 0.88 -0.3 4,297,278 - AO356_19130 0.88 -0.0 4,297,349 + +0.1 4,297,349 + +0.5 4,297,350 - -0.8 4,297,350 - +1.5 4,297,350 - -0.3 4,297,350 - +0.5 4,297,374 - -0.9 4,297,437 - +0.5 4,297,476 - -0.5 4,297,476 - +0.3 4,297,603 + -1.5 4,297,624 + -0.2 4,298,017 + AO356_19135 0.36 -1.5 4,298,017 + AO356_19135 0.36 -0.4 4,298,017 + AO356_19135 0.36 -0.8 4,298,017 + AO356_19135 0.36 -1.0 4,298,018 - AO356_19135 0.36 -0.9 4,298,018 - AO356_19135 0.36 -1.5 4,298,018 - AO356_19135 0.36 -0.9 4,298,018 - AO356_19135 0.36 -0.5
Or see this region's nucleotide sequence