Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_11600 and AO356_11605 are separated by 3 nucleotides AO356_11605 and AO356_11610 are separated by 80 nucleotides AO356_11610 and AO356_11615 are separated by 190 nucleotides
AO356_11600: AO356_11600 - glycine--tRNA ligase subunit beta, at 2,625,271 to 2,627,325
_11600
AO356_11605: AO356_11605 - histidinol phosphatase, at 2,627,329 to 2,627,862
_11605
AO356_11610: AO356_11610 - glycerol acyltransferase, at 2,627,943 to 2,628,722
_11610
AO356_11615: AO356_11615 - histidine kinase, at 2,628,913 to 2,630,430
_11615
Position (kb)
2627
2628
2629 Strain fitness (log2 ratio)
-2
-1
0
1 at 2627.860 kb on + strand at 2627.860 kb on + strand at 2627.860 kb on + strand at 2627.942 kb on + strand at 2627.943 kb on - strand at 2628.223 kb on - strand, within AO356_11610 at 2628.631 kb on + strand, within AO356_11610 at 2628.631 kb on + strand, within AO356_11610 at 2628.833 kb on + strand at 2628.841 kb on + strand at 2628.842 kb on - strand at 2628.854 kb on + strand at 2628.854 kb on + strand at 2628.854 kb on + strand at 2628.854 kb on + strand at 2628.854 kb on + strand at 2628.854 kb on + strand at 2628.854 kb on + strand at 2628.855 kb on - strand at 2628.855 kb on - strand at 2628.886 kb on + strand at 2628.886 kb on + strand at 2628.887 kb on - strand at 2628.887 kb on - strand at 2628.958 kb on - strand at 2628.970 kb on - strand at 2629.022 kb on - strand at 2629.173 kb on + strand, within AO356_11615 at 2629.173 kb on + strand, within AO356_11615 at 2629.173 kb on + strand, within AO356_11615 at 2629.173 kb on + strand, within AO356_11615 at 2629.173 kb on + strand, within AO356_11615 at 2629.174 kb on - strand, within AO356_11615 at 2629.174 kb on - strand, within AO356_11615 at 2629.174 kb on - strand, within AO356_11615 at 2629.193 kb on + strand, within AO356_11615 at 2629.193 kb on + strand, within AO356_11615 at 2629.193 kb on + strand, within AO356_11615 at 2629.193 kb on + strand, within AO356_11615 at 2629.193 kb on + strand, within AO356_11615 at 2629.193 kb on + strand, within AO356_11615 at 2629.193 kb on + strand, within AO356_11615 at 2629.193 kb on + strand, within AO356_11615 at 2629.194 kb on - strand, within AO356_11615 at 2629.194 kb on - strand, within AO356_11615 at 2629.194 kb on - strand, within AO356_11615 at 2629.194 kb on - strand, within AO356_11615 at 2629.194 kb on - strand, within AO356_11615 at 2629.194 kb on - strand, within AO356_11615 at 2629.194 kb on - strand, within AO356_11615 at 2629.194 kb on - strand, within AO356_11615 at 2629.238 kb on - strand, within AO356_11615 at 2629.276 kb on + strand, within AO356_11615 at 2629.276 kb on + strand, within AO356_11615 at 2629.276 kb on + strand, within AO356_11615 at 2629.277 kb on - strand, within AO356_11615 at 2629.277 kb on - strand, within AO356_11615 at 2629.296 kb on + strand, within AO356_11615 at 2629.296 kb on + strand, within AO356_11615 at 2629.297 kb on - strand, within AO356_11615 at 2629.297 kb on - strand, within AO356_11615 at 2629.297 kb on - strand, within AO356_11615 at 2629.376 kb on + strand, within AO356_11615 at 2629.377 kb on - strand, within AO356_11615 at 2629.377 kb on - strand, within AO356_11615 at 2629.405 kb on + strand, within AO356_11615 at 2629.405 kb on + strand, within AO356_11615 at 2629.406 kb on - strand, within AO356_11615 at 2629.406 kb on - strand, within AO356_11615 at 2629.406 kb on - strand, within AO356_11615 at 2629.406 kb on - strand, within AO356_11615 at 2629.438 kb on + strand, within AO356_11615 at 2629.438 kb on + strand, within AO356_11615 at 2629.438 kb on + strand, within AO356_11615 at 2629.439 kb on - strand, within AO356_11615 at 2629.439 kb on - strand, within AO356_11615 at 2629.677 kb on + strand, within AO356_11615 at 2629.677 kb on + strand, within AO356_11615 at 2629.677 kb on + strand, within AO356_11615 at 2629.677 kb on + strand, within AO356_11615 at 2629.677 kb on + strand, within AO356_11615 at 2629.677 kb on + strand, within AO356_11615 at 2629.678 kb on - strand, within AO356_11615 at 2629.678 kb on - strand, within AO356_11615 at 2629.678 kb on - strand, within AO356_11615 at 2629.678 kb on - strand, within AO356_11615
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 2,627,860 + -0.5 2,627,860 + -0.0 2,627,860 + +0.9 2,627,942 + +1.6 2,627,943 - -0.2 2,628,223 - AO356_11610 0.36 -0.2 2,628,631 + AO356_11610 0.88 -0.9 2,628,631 + AO356_11610 0.88 -2.1 2,628,833 + -1.2 2,628,841 + -0.4 2,628,842 - -1.5 2,628,854 + -1.4 2,628,854 + +0.2 2,628,854 + +0.3 2,628,854 + +0.6 2,628,854 + +0.1 2,628,854 + +0.5 2,628,854 + +0.1 2,628,855 - -0.2 2,628,855 - -0.8 2,628,886 + +1.0 2,628,886 + -0.8 2,628,887 - -1.2 2,628,887 - +0.0 2,628,958 - +0.5 2,628,970 - +0.7 2,629,022 - -0.4 2,629,173 + AO356_11615 0.17 +0.8 2,629,173 + AO356_11615 0.17 -0.6 2,629,173 + AO356_11615 0.17 -0.4 2,629,173 + AO356_11615 0.17 +0.5 2,629,173 + AO356_11615 0.17 +0.9 2,629,174 - AO356_11615 0.17 -0.7 2,629,174 - AO356_11615 0.17 -1.0 2,629,174 - AO356_11615 0.17 +0.6 2,629,193 + AO356_11615 0.18 -0.2 2,629,193 + AO356_11615 0.18 -1.1 2,629,193 + AO356_11615 0.18 +0.7 2,629,193 + AO356_11615 0.18 +0.1 2,629,193 + AO356_11615 0.18 +0.9 2,629,193 + AO356_11615 0.18 +0.9 2,629,193 + AO356_11615 0.18 -0.8 2,629,193 + AO356_11615 0.18 -0.1 2,629,194 - AO356_11615 0.19 +0.9 2,629,194 - AO356_11615 0.19 -1.0 2,629,194 - AO356_11615 0.19 -0.2 2,629,194 - AO356_11615 0.19 -1.3 2,629,194 - AO356_11615 0.19 +0.1 2,629,194 - AO356_11615 0.19 -1.3 2,629,194 - AO356_11615 0.19 -0.9 2,629,194 - AO356_11615 0.19 +0.4 2,629,238 - AO356_11615 0.21 -0.6 2,629,276 + AO356_11615 0.24 -0.6 2,629,276 + AO356_11615 0.24 +0.5 2,629,276 + AO356_11615 0.24 +1.2 2,629,277 - AO356_11615 0.24 -1.8 2,629,277 - AO356_11615 0.24 -0.7 2,629,296 + AO356_11615 0.25 +0.5 2,629,296 + AO356_11615 0.25 -0.1 2,629,297 - AO356_11615 0.25 +0.8 2,629,297 - AO356_11615 0.25 +0.1 2,629,297 - AO356_11615 0.25 +0.4 2,629,376 + AO356_11615 0.31 +0.2 2,629,377 - AO356_11615 0.31 +0.0 2,629,377 - AO356_11615 0.31 -1.8 2,629,405 + AO356_11615 0.32 -0.4 2,629,405 + AO356_11615 0.32 +1.3 2,629,406 - AO356_11615 0.32 -0.7 2,629,406 - AO356_11615 0.32 -0.5 2,629,406 - AO356_11615 0.32 +0.1 2,629,406 - AO356_11615 0.32 -0.9 2,629,438 + AO356_11615 0.35 +0.2 2,629,438 + AO356_11615 0.35 +0.9 2,629,438 + AO356_11615 0.35 +0.0 2,629,439 - AO356_11615 0.35 +0.5 2,629,439 - AO356_11615 0.35 -1.0 2,629,677 + AO356_11615 0.50 -1.6 2,629,677 + AO356_11615 0.50 -1.9 2,629,677 + AO356_11615 0.50 +0.9 2,629,677 + AO356_11615 0.50 +0.7 2,629,677 + AO356_11615 0.50 -1.2 2,629,677 + AO356_11615 0.50 +0.9 2,629,678 - AO356_11615 0.50 +0.6 2,629,678 - AO356_11615 0.50 -0.4 2,629,678 - AO356_11615 0.50 -0.1 2,629,678 - AO356_11615 0.50 -0.7
Or see this region's nucleotide sequence