Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_10045

Experiment: L-Histidine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_10040 and AO356_10045 overlap by 4 nucleotidesAO356_10045 and AO356_10050 overlap by 4 nucleotidesAO356_10050 and AO356_10055 overlap by 4 nucleotides AO356_10040: AO356_10040 - dTDP-glucose 4,6-dehydratase, at 2,266,430 to 2,267,512 _10040 AO356_10045: AO356_10045 - glucose-1-phosphate thymidylyltransferase, at 2,267,509 to 2,268,384 _10045 AO356_10050: AO356_10050 - dTDP-4-dehydrorhamnose 3,5-epimerase, at 2,268,381 to 2,268,926 _10050 AO356_10055: AO356_10055 - dTDP-4-dehydrorhamnose reductase, at 2,268,923 to 2,269,807 _10055 Position (kb) 2267 2268 2269Strain fitness (log2 ratio) -1 0 1at 2267.462 kb on + strandat 2267.462 kb on + strandat 2267.463 kb on - strandat 2267.463 kb on - strandat 2267.463 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Histidine (C)
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2,267,462 + -1.0
2,267,462 + -0.1
2,267,463 - -0.4
2,267,463 - -0.1
2,267,463 - -0.0

Or see this region's nucleotide sequence