Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_10030 and AO356_10035 are separated by 253 nucleotides AO356_10035 and AO356_10040 are separated by 209 nucleotides
AO356_10030: AO356_10030 - Agmatine deiminase (EC 3.5.3.12) (from data) , at 2,261,948 to 2,263,054
_10030
AO356_10035: AO356_10035 - hypothetical protein, at 2,263,308 to 2,266,220
_10035
AO356_10040: AO356_10040 - dTDP-glucose 4,6-dehydratase, at 2,266,430 to 2,267,512
_10040
Position (kb)
2263
2264
2265
2266
2267 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2262.328 kb on - strand, within AO356_10030 at 2262.328 kb on - strand, within AO356_10030 at 2262.328 kb on - strand, within AO356_10030 at 2262.384 kb on + strand, within AO356_10030 at 2262.384 kb on + strand, within AO356_10030 at 2262.384 kb on + strand, within AO356_10030 at 2262.384 kb on + strand, within AO356_10030 at 2262.384 kb on + strand, within AO356_10030 at 2262.385 kb on - strand, within AO356_10030 at 2262.385 kb on - strand, within AO356_10030 at 2262.385 kb on - strand, within AO356_10030 at 2262.385 kb on - strand, within AO356_10030 at 2262.385 kb on - strand, within AO356_10030 at 2262.678 kb on + strand, within AO356_10030 at 2262.678 kb on + strand, within AO356_10030 at 2262.678 kb on + strand, within AO356_10030 at 2262.679 kb on - strand, within AO356_10030 at 2262.679 kb on - strand, within AO356_10030 at 2262.760 kb on + strand, within AO356_10030 at 2262.760 kb on + strand, within AO356_10030 at 2262.761 kb on - strand, within AO356_10030 at 2263.098 kb on + strand at 2263.235 kb on + strand at 2263.235 kb on + strand at 2263.235 kb on + strand at 2263.235 kb on + strand at 2263.235 kb on + strand at 2263.235 kb on + strand at 2263.235 kb on + strand at 2263.235 kb on + strand at 2263.236 kb on - strand at 2263.236 kb on - strand at 2263.236 kb on - strand at 2263.238 kb on + strand at 2263.239 kb on - strand at 2263.239 kb on - strand at 2263.239 kb on - strand at 2263.239 kb on - strand at 2263.239 kb on - strand at 2263.326 kb on + strand at 2263.326 kb on + strand at 2263.327 kb on - strand at 2263.340 kb on + strand at 2263.340 kb on + strand at 2263.340 kb on + strand at 2263.341 kb on - strand at 2263.341 kb on - strand at 2263.341 kb on - strand at 2263.408 kb on + strand at 2263.409 kb on - strand at 2263.409 kb on - strand at 2263.525 kb on + strand at 2263.525 kb on + strand at 2263.525 kb on + strand at 2263.526 kb on - strand at 2263.708 kb on + strand, within AO356_10035 at 2263.708 kb on + strand, within AO356_10035 at 2263.708 kb on + strand, within AO356_10035 at 2263.709 kb on - strand, within AO356_10035 at 2263.709 kb on - strand, within AO356_10035 at 2263.709 kb on - strand, within AO356_10035 at 2263.883 kb on + strand, within AO356_10035 at 2263.884 kb on - strand, within AO356_10035 at 2263.915 kb on + strand, within AO356_10035 at 2263.915 kb on + strand, within AO356_10035 at 2263.915 kb on + strand, within AO356_10035 at 2263.915 kb on + strand, within AO356_10035 at 2263.916 kb on - strand, within AO356_10035 at 2263.916 kb on - strand, within AO356_10035 at 2263.930 kb on + strand, within AO356_10035 at 2263.967 kb on - strand, within AO356_10035 at 2263.967 kb on - strand, within AO356_10035 at 2264.047 kb on + strand, within AO356_10035 at 2264.047 kb on + strand, within AO356_10035 at 2264.047 kb on + strand, within AO356_10035 at 2264.048 kb on - strand, within AO356_10035 at 2264.048 kb on - strand, within AO356_10035 at 2264.048 kb on - strand, within AO356_10035 at 2264.048 kb on - strand, within AO356_10035 at 2264.048 kb on - strand, within AO356_10035 at 2264.048 kb on - strand, within AO356_10035 at 2264.048 kb on - strand, within AO356_10035 at 2264.087 kb on - strand, within AO356_10035 at 2264.087 kb on - strand, within AO356_10035 at 2264.087 kb on - strand, within AO356_10035 at 2264.087 kb on - strand, within AO356_10035 at 2264.087 kb on - strand, within AO356_10035 at 2264.197 kb on + strand, within AO356_10035 at 2264.197 kb on + strand, within AO356_10035 at 2264.198 kb on - strand, within AO356_10035 at 2264.198 kb on - strand, within AO356_10035 at 2264.533 kb on + strand, within AO356_10035 at 2264.533 kb on + strand, within AO356_10035 at 2264.533 kb on + strand, within AO356_10035 at 2264.534 kb on - strand, within AO356_10035 at 2264.534 kb on - strand, within AO356_10035 at 2264.534 kb on - strand, within AO356_10035 at 2264.534 kb on - strand, within AO356_10035 at 2264.534 kb on - strand, within AO356_10035 at 2264.534 kb on - strand, within AO356_10035 at 2264.534 kb on - strand, within AO356_10035 at 2264.536 kb on + strand, within AO356_10035 at 2264.536 kb on + strand, within AO356_10035 at 2264.536 kb on + strand, within AO356_10035 at 2264.536 kb on + strand, within AO356_10035 at 2264.536 kb on + strand, within AO356_10035 at 2264.536 kb on + strand, within AO356_10035 at 2264.536 kb on + strand, within AO356_10035 at 2264.537 kb on - strand, within AO356_10035 at 2264.537 kb on - strand, within AO356_10035 at 2264.537 kb on - strand, within AO356_10035 at 2264.537 kb on - strand, within AO356_10035 at 2264.537 kb on - strand, within AO356_10035 at 2264.537 kb on - strand, within AO356_10035 at 2264.537 kb on - strand, within AO356_10035 at 2264.537 kb on - strand, within AO356_10035 at 2264.537 kb on - strand, within AO356_10035 at 2264.628 kb on + strand, within AO356_10035 at 2264.628 kb on + strand, within AO356_10035 at 2264.629 kb on - strand, within AO356_10035 at 2264.932 kb on + strand, within AO356_10035 at 2264.932 kb on + strand, within AO356_10035 at 2264.932 kb on + strand, within AO356_10035 at 2264.932 kb on + strand, within AO356_10035 at 2264.933 kb on - strand, within AO356_10035 at 2264.933 kb on - strand, within AO356_10035 at 2264.933 kb on - strand, within AO356_10035 at 2264.980 kb on + strand, within AO356_10035 at 2265.277 kb on + strand, within AO356_10035 at 2265.277 kb on + strand, within AO356_10035 at 2265.358 kb on - strand, within AO356_10035 at 2265.400 kb on + strand, within AO356_10035 at 2265.400 kb on + strand, within AO356_10035 at 2265.401 kb on - strand, within AO356_10035 at 2265.495 kb on - strand, within AO356_10035 at 2265.703 kb on + strand, within AO356_10035 at 2265.703 kb on + strand, within AO356_10035 at 2265.703 kb on + strand, within AO356_10035 at 2265.703 kb on + strand, within AO356_10035 at 2265.704 kb on - strand, within AO356_10035 at 2265.704 kb on - strand, within AO356_10035 at 2265.704 kb on - strand, within AO356_10035 at 2265.704 kb on - strand, within AO356_10035 at 2265.704 kb on - strand, within AO356_10035 at 2265.704 kb on - strand, within AO356_10035 at 2265.704 kb on - strand, within AO356_10035 at 2265.704 kb on - strand, within AO356_10035 at 2265.820 kb on - strand, within AO356_10035 at 2265.871 kb on + strand, within AO356_10035 at 2265.871 kb on + strand, within AO356_10035 at 2265.871 kb on + strand, within AO356_10035 at 2265.871 kb on + strand, within AO356_10035 at 2265.872 kb on - strand, within AO356_10035 at 2265.872 kb on - strand, within AO356_10035 at 2266.011 kb on + strand at 2266.011 kb on + strand at 2266.011 kb on + strand at 2266.012 kb on - strand at 2266.012 kb on - strand at 2266.012 kb on - strand at 2266.012 kb on - strand at 2266.012 kb on - strand at 2266.027 kb on + strand at 2266.027 kb on + strand at 2266.027 kb on + strand at 2266.028 kb on - strand at 2266.081 kb on + strand at 2266.081 kb on + strand at 2266.081 kb on + strand at 2266.133 kb on - strand at 2266.208 kb on + strand at 2266.209 kb on - strand at 2266.220 kb on + strand at 2266.220 kb on + strand at 2266.220 kb on + strand at 2266.220 kb on + strand at 2266.220 kb on + strand at 2266.220 kb on + strand at 2266.220 kb on + strand at 2266.220 kb on + strand at 2266.220 kb on + strand at 2266.220 kb on + strand at 2266.220 kb on + strand at 2266.221 kb on - strand at 2266.221 kb on - strand at 2266.221 kb on - strand at 2266.221 kb on - strand at 2266.221 kb on - strand at 2266.221 kb on - strand at 2266.221 kb on - strand at 2266.221 kb on - strand at 2266.221 kb on - strand at 2266.255 kb on + strand at 2266.255 kb on + strand at 2266.255 kb on + strand at 2266.255 kb on + strand at 2266.255 kb on + strand at 2266.255 kb on + strand at 2266.256 kb on - strand at 2266.256 kb on - strand at 2266.256 kb on - strand at 2266.278 kb on + strand at 2266.279 kb on - strand at 2266.279 kb on - strand at 2266.301 kb on + strand at 2266.326 kb on + strand at 2266.327 kb on - strand at 2266.350 kb on + strand at 2266.385 kb on + strand at 2266.385 kb on + strand at 2266.385 kb on + strand at 2266.385 kb on + strand at 2266.385 kb on + strand at 2266.385 kb on + strand at 2266.385 kb on + strand at 2266.386 kb on - strand at 2266.386 kb on - strand at 2266.386 kb on - strand at 2266.386 kb on - strand at 2266.386 kb on - strand at 2266.386 kb on - strand at 2266.386 kb on - strand at 2266.386 kb on - strand at 2266.394 kb on + strand at 2266.394 kb on + strand at 2266.394 kb on + strand at 2266.395 kb on - strand at 2266.395 kb on - strand at 2266.395 kb on - strand at 2266.423 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 2,262,328 - AO356_10030 0.34 -0.3 2,262,328 - AO356_10030 0.34 +1.1 2,262,328 - AO356_10030 0.34 +0.4 2,262,384 + AO356_10030 0.39 +1.1 2,262,384 + AO356_10030 0.39 +0.3 2,262,384 + AO356_10030 0.39 +0.6 2,262,384 + AO356_10030 0.39 -0.2 2,262,384 + AO356_10030 0.39 +0.2 2,262,385 - AO356_10030 0.39 +0.2 2,262,385 - AO356_10030 0.39 +0.2 2,262,385 - AO356_10030 0.39 +0.7 2,262,385 - AO356_10030 0.39 +0.4 2,262,385 - AO356_10030 0.39 -0.3 2,262,678 + AO356_10030 0.66 +0.9 2,262,678 + AO356_10030 0.66 +0.9 2,262,678 + AO356_10030 0.66 +0.8 2,262,679 - AO356_10030 0.66 -0.7 2,262,679 - AO356_10030 0.66 -0.6 2,262,760 + AO356_10030 0.73 -0.4 2,262,760 + AO356_10030 0.73 -0.7 2,262,761 - AO356_10030 0.73 +1.0 2,263,098 + +0.8 2,263,235 + -0.8 2,263,235 + -1.3 2,263,235 + +0.8 2,263,235 + -1.2 2,263,235 + -0.6 2,263,235 + +0.1 2,263,235 + -0.4 2,263,235 + -2.4 2,263,236 - -0.2 2,263,236 - +0.7 2,263,236 - +0.6 2,263,238 + +0.1 2,263,239 - -0.4 2,263,239 - +0.9 2,263,239 - +1.0 2,263,239 - -1.1 2,263,239 - +0.7 2,263,326 + -0.3 2,263,326 + +0.2 2,263,327 - -0.0 2,263,340 + -0.7 2,263,340 + +0.8 2,263,340 + +0.5 2,263,341 - -0.4 2,263,341 - +0.2 2,263,341 - -1.8 2,263,408 + +0.2 2,263,409 - +0.8 2,263,409 - -1.0 2,263,525 + +0.9 2,263,525 + +0.3 2,263,525 + +0.6 2,263,526 - -0.1 2,263,708 + AO356_10035 0.14 -0.1 2,263,708 + AO356_10035 0.14 -0.1 2,263,708 + AO356_10035 0.14 -0.5 2,263,709 - AO356_10035 0.14 -0.3 2,263,709 - AO356_10035 0.14 -0.6 2,263,709 - AO356_10035 0.14 -0.5 2,263,883 + AO356_10035 0.20 -0.5 2,263,884 - AO356_10035 0.20 -1.2 2,263,915 + AO356_10035 0.21 -3.2 2,263,915 + AO356_10035 0.21 -1.5 2,263,915 + AO356_10035 0.21 +0.1 2,263,915 + AO356_10035 0.21 +1.2 2,263,916 - AO356_10035 0.21 -0.6 2,263,916 - AO356_10035 0.21 +0.9 2,263,930 + AO356_10035 0.21 +0.1 2,263,967 - AO356_10035 0.23 -1.4 2,263,967 - AO356_10035 0.23 -1.4 2,264,047 + AO356_10035 0.25 +1.3 2,264,047 + AO356_10035 0.25 +0.4 2,264,047 + AO356_10035 0.25 -0.5 2,264,048 - AO356_10035 0.25 -1.3 2,264,048 - AO356_10035 0.25 +0.9 2,264,048 - AO356_10035 0.25 -1.2 2,264,048 - AO356_10035 0.25 -0.0 2,264,048 - AO356_10035 0.25 +0.9 2,264,048 - AO356_10035 0.25 -0.9 2,264,048 - AO356_10035 0.25 +0.2 2,264,087 - AO356_10035 0.27 +0.1 2,264,087 - AO356_10035 0.27 +0.7 2,264,087 - AO356_10035 0.27 -0.5 2,264,087 - AO356_10035 0.27 +0.5 2,264,087 - AO356_10035 0.27 -0.9 2,264,197 + AO356_10035 0.31 -0.4 2,264,197 + AO356_10035 0.31 +0.5 2,264,198 - AO356_10035 0.31 -0.4 2,264,198 - AO356_10035 0.31 -1.1 2,264,533 + AO356_10035 0.42 -0.3 2,264,533 + AO356_10035 0.42 +0.7 2,264,533 + AO356_10035 0.42 +0.1 2,264,534 - AO356_10035 0.42 +0.0 2,264,534 - AO356_10035 0.42 -1.3 2,264,534 - AO356_10035 0.42 +1.1 2,264,534 - AO356_10035 0.42 -0.4 2,264,534 - AO356_10035 0.42 -0.1 2,264,534 - AO356_10035 0.42 +0.5 2,264,534 - AO356_10035 0.42 +0.2 2,264,536 + AO356_10035 0.42 -0.2 2,264,536 + AO356_10035 0.42 +0.1 2,264,536 + AO356_10035 0.42 +0.2 2,264,536 + AO356_10035 0.42 +0.2 2,264,536 + AO356_10035 0.42 -0.3 2,264,536 + AO356_10035 0.42 +0.7 2,264,536 + AO356_10035 0.42 +0.6 2,264,537 - AO356_10035 0.42 +0.2 2,264,537 - AO356_10035 0.42 -0.9 2,264,537 - AO356_10035 0.42 -0.8 2,264,537 - AO356_10035 0.42 -0.7 2,264,537 - AO356_10035 0.42 -0.2 2,264,537 - AO356_10035 0.42 -0.2 2,264,537 - AO356_10035 0.42 +0.6 2,264,537 - AO356_10035 0.42 +0.9 2,264,537 - AO356_10035 0.42 +0.7 2,264,628 + AO356_10035 0.45 -0.1 2,264,628 + AO356_10035 0.45 -0.9 2,264,629 - AO356_10035 0.45 +0.4 2,264,932 + AO356_10035 0.56 +0.2 2,264,932 + AO356_10035 0.56 +0.4 2,264,932 + AO356_10035 0.56 +0.2 2,264,932 + AO356_10035 0.56 -0.4 2,264,933 - AO356_10035 0.56 -0.4 2,264,933 - AO356_10035 0.56 +0.7 2,264,933 - AO356_10035 0.56 +0.0 2,264,980 + AO356_10035 0.57 +0.2 2,265,277 + AO356_10035 0.68 +0.5 2,265,277 + AO356_10035 0.68 +0.1 2,265,358 - AO356_10035 0.70 -0.3 2,265,400 + AO356_10035 0.72 -0.1 2,265,400 + AO356_10035 0.72 +0.2 2,265,401 - AO356_10035 0.72 -0.0 2,265,495 - AO356_10035 0.75 -1.4 2,265,703 + AO356_10035 0.82 +0.9 2,265,703 + AO356_10035 0.82 -0.8 2,265,703 + AO356_10035 0.82 +0.8 2,265,703 + AO356_10035 0.82 +0.8 2,265,704 - AO356_10035 0.82 -0.3 2,265,704 - AO356_10035 0.82 -0.1 2,265,704 - AO356_10035 0.82 +0.5 2,265,704 - AO356_10035 0.82 +0.1 2,265,704 - AO356_10035 0.82 -2.1 2,265,704 - AO356_10035 0.82 -2.3 2,265,704 - AO356_10035 0.82 -0.1 2,265,704 - AO356_10035 0.82 -1.1 2,265,820 - AO356_10035 0.86 -0.3 2,265,871 + AO356_10035 0.88 +0.5 2,265,871 + AO356_10035 0.88 +0.6 2,265,871 + AO356_10035 0.88 -0.9 2,265,871 + AO356_10035 0.88 +1.1 2,265,872 - AO356_10035 0.88 +1.3 2,265,872 - AO356_10035 0.88 -0.8 2,266,011 + +0.4 2,266,011 + -0.2 2,266,011 + -0.1 2,266,012 - -0.3 2,266,012 - +0.8 2,266,012 - +0.7 2,266,012 - +0.9 2,266,012 - +1.1 2,266,027 + -0.5 2,266,027 + -0.4 2,266,027 + +0.5 2,266,028 - +0.7 2,266,081 + +0.5 2,266,081 + +0.4 2,266,081 + +0.3 2,266,133 - -0.6 2,266,208 + +0.9 2,266,209 - +0.3 2,266,220 + +0.9 2,266,220 + -0.4 2,266,220 + -1.7 2,266,220 + -0.1 2,266,220 + +0.7 2,266,220 + +0.9 2,266,220 + -0.4 2,266,220 + -0.0 2,266,220 + +0.2 2,266,220 + +0.4 2,266,220 + -0.1 2,266,221 - +0.2 2,266,221 - -1.0 2,266,221 - +0.1 2,266,221 - +1.7 2,266,221 - +1.1 2,266,221 - +0.4 2,266,221 - +0.2 2,266,221 - +0.3 2,266,221 - +0.1 2,266,255 + -0.7 2,266,255 + -0.7 2,266,255 + -1.3 2,266,255 + +0.6 2,266,255 + -2.2 2,266,255 + -0.3 2,266,256 - -0.4 2,266,256 - +0.4 2,266,256 - -2.3 2,266,278 + +1.7 2,266,279 - +0.2 2,266,279 - +0.3 2,266,301 + +0.1 2,266,326 + -1.4 2,266,327 - -0.0 2,266,350 + +0.6 2,266,385 + +0.1 2,266,385 + +0.9 2,266,385 + -0.9 2,266,385 + +0.1 2,266,385 + +0.6 2,266,385 + -0.2 2,266,385 + +0.1 2,266,386 - -2.3 2,266,386 - +0.9 2,266,386 - -0.6 2,266,386 - +0.8 2,266,386 - -0.4 2,266,386 - -1.5 2,266,386 - +0.4 2,266,386 - +0.6 2,266,394 + +1.0 2,266,394 + -0.3 2,266,394 + +0.1 2,266,395 - -0.5 2,266,395 - +0.0 2,266,395 - -0.9 2,266,423 + +0.1
Or see this region's nucleotide sequence