Strain Fitness in Pantoea sp. MT58 around IAI47_18490

Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
3,932,543	+		IAI47_18485	0.15	+0.0
3,932,543	+		IAI47_18485	0.15	-0.0
3,932,544	-		IAI47_18485	0.15	-0.1
3,932,544	-		IAI47_18485	0.15	+1.2
3,932,545	+		IAI47_18485	0.15	+0.4
3,932,545	+		IAI47_18485	0.15	+1.3
3,932,545	+		IAI47_18485	0.15	+2.6
3,932,545	+		IAI47_18485	0.15	+1.2
3,932,545	+		IAI47_18485	0.15	+0.3
3,932,545	+		IAI47_18485	0.15	-0.4
3,932,546	-		IAI47_18485	0.15	-0.8
3,932,546	-		IAI47_18485	0.15	+0.5
3,932,546	-		IAI47_18485	0.15	+1.5
3,932,546	-		IAI47_18485	0.15	-1.8
3,932,562	+		IAI47_18485	0.16	-0.9
3,932,562	+		IAI47_18485	0.16	+1.5
3,932,563	-		IAI47_18485	0.17	+1.5
3,932,624	+		IAI47_18485	0.22	+0.8
3,932,625	-		IAI47_18485	0.22	+3.0
3,932,625	-		IAI47_18485	0.22	+0.3
3,932,626	+		IAI47_18485	0.22	+1.3
3,932,626	+		IAI47_18485	0.22	+1.9
3,932,626	+		IAI47_18485	0.22	-2.5
3,932,626	+		IAI47_18485	0.22	+0.9
3,932,626	+		IAI47_18485	0.22	+0.4
3,932,627	-		IAI47_18485	0.22	-0.7
3,932,627	-		IAI47_18485	0.22	+0.4
3,932,627	-		IAI47_18485	0.22	+0.4
3,932,627	-		IAI47_18485	0.22	+0.7
3,932,627	-		IAI47_18485	0.22	-1.4
3,932,678	+		IAI47_18485	0.27	-0.0
3,932,678	+		IAI47_18485	0.27	-0.9
3,932,678	+		IAI47_18485	0.27	-2.2
3,932,679	-		IAI47_18485	0.27	+2.8
3,932,679	-		IAI47_18485	0.27	+1.9
3,932,679	-		IAI47_18485	0.27	+3.6
3,932,713	+		IAI47_18485	0.30	+1.2
3,932,713	+		IAI47_18485	0.30	-2.3
3,932,714	-		IAI47_18485	0.30	+0.7
3,932,716	+		IAI47_18485	0.30	+1.6
3,932,716	+		IAI47_18485	0.30	+1.7
3,932,717	-		IAI47_18485	0.30	+0.3
3,932,782	+		IAI47_18485	0.36	+1.3
3,932,783	-		IAI47_18485	0.36	+1.6
3,932,783	-		IAI47_18485	0.36	+0.7
3,932,783	-		IAI47_18485	0.36	+2.4
3,932,783	-		IAI47_18485	0.36	+0.6
3,932,809	+		IAI47_18485	0.38	+0.4
3,932,810	-		IAI47_18485	0.38	-1.3
3,932,810	-		IAI47_18485	0.38	-0.4
3,932,834	+		IAI47_18485	0.40	+1.8
3,932,834	+		IAI47_18485	0.40	+0.0
3,932,834	+		IAI47_18485	0.40	+0.8
3,932,835	-		IAI47_18485	0.41	+1.8
3,932,836	+		IAI47_18485	0.41	+0.9
3,932,836	+		IAI47_18485	0.41	-1.9
3,932,836	+		IAI47_18485	0.41	+0.4
3,932,836	+		IAI47_18485	0.41	+2.1
3,932,836	+		IAI47_18485	0.41	+3.0
3,932,836	+		IAI47_18485	0.41	-0.3
3,932,837	-		IAI47_18485	0.41	+1.2
3,932,837	-		IAI47_18485	0.41	+0.4
3,932,837	-		IAI47_18485	0.41	+1.2
3,932,837	-		IAI47_18485	0.41	+0.9
3,932,837	-		IAI47_18485	0.41	-0.3
3,932,837	-		IAI47_18485	0.41	+1.1
3,932,837	-		IAI47_18485	0.41	-0.3
3,932,837	-		IAI47_18485	0.41	+1.2
3,932,837	-		IAI47_18485	0.41	+2.5
3,932,837	-		IAI47_18485	0.41	+1.4
3,932,837	-		IAI47_18485	0.41	-1.0
3,932,837	-		IAI47_18485	0.41	+0.2
3,932,837	-		IAI47_18485	0.41	-0.2
3,932,837	-		IAI47_18485	0.41	-0.3
3,932,837	-		IAI47_18485	0.41	-0.5
3,932,840	+		IAI47_18485	0.41	-0.9
3,932,840	+		IAI47_18485	0.41	+0.6
3,932,840	+		IAI47_18485	0.41	-0.4
3,932,841	-		IAI47_18485	0.41	-0.4
3,932,876	+		IAI47_18485	0.44	-0.1
3,932,877	-		IAI47_18485	0.44	+0.4
3,932,924	+		IAI47_18485	0.48	+0.9
3,932,925	-		IAI47_18485	0.49	-0.0
3,932,959	+		IAI47_18485	0.52	+0.3
3,932,960	-		IAI47_18485	0.52	+1.2
3,932,960	-		IAI47_18485	0.52	+0.4
3,932,960	-		IAI47_18485	0.52	+0.6
3,932,993	+		IAI47_18485	0.55	+0.4
3,932,993	+		IAI47_18485	0.55	-0.6
3,932,994	-		IAI47_18485	0.55	-1.0
3,932,994	-		IAI47_18485	0.55	+0.3
3,932,994	-		IAI47_18485	0.55	+0.3
3,932,994	-		IAI47_18485	0.55	-0.5
3,933,025	+		IAI47_18485	0.57	+2.0
3,933,025	+		IAI47_18485	0.57	-0.2
3,933,025	+		IAI47_18485	0.57	-0.1
3,933,025	+		IAI47_18485	0.57	+1.7
3,933,025	+		IAI47_18485	0.57	+0.3
3,933,026	-		IAI47_18485	0.57	-1.3
3,933,026	-		IAI47_18485	0.57	+0.9
3,933,026	-		IAI47_18485	0.57	+0.6
3,933,071	+		IAI47_18485	0.61	+1.0
3,933,071	+		IAI47_18485	0.61	+0.7
3,933,071	+		IAI47_18485	0.61	-0.4
3,933,071	+		IAI47_18485	0.61	+0.6
3,933,071	+		IAI47_18485	0.61	+0.8
3,933,072	-		IAI47_18485	0.62	+0.7
3,933,072	-		IAI47_18485	0.62	+1.9
3,933,072	-		IAI47_18485	0.62	+0.2
3,933,072	-		IAI47_18485	0.62	+1.4
3,933,072	-		IAI47_18485	0.62	+1.1
3,933,072	-		IAI47_18485	0.62	+0.2
3,933,072	-		IAI47_18485	0.62	+0.4
3,933,072	-		IAI47_18485	0.62	+0.1
3,933,072	-		IAI47_18485	0.62	+0.9
3,933,072	-		IAI47_18485	0.62	+0.4
3,933,072	-		IAI47_18485	0.62	-1.6
3,933,093	-		IAI47_18485	0.63	+0.3
3,933,093	-		IAI47_18485	0.63	-0.6
3,933,125	-		IAI47_18485	0.66	+0.8
3,933,125	-		IAI47_18485	0.66	-0.3
3,933,251	+		IAI47_18485	0.77	-1.2
3,933,271	+		IAI47_18485	0.79	-0.2
3,933,271	+		IAI47_18485	0.79	+0.6
3,933,271	+		IAI47_18485	0.79	-0.1
3,933,272	-		IAI47_18485	0.79	+0.7
3,933,312	+		IAI47_18485	0.83	+1.5
3,933,312	+		IAI47_18485	0.83	-0.2
3,933,313	-		IAI47_18485	0.83	+2.4
3,933,342	-		IAI47_18485	0.85	-0.0
3,933,372	-		IAI47_18485	0.88	-0.1
3,933,410	+				+0.1
3,933,411	-				+0.8
3,933,458	+				-1.3
3,933,458	+				-0.1
3,933,458	+				+1.3
3,933,458	+				-0.9
3,933,458	+				+0.1
3,933,458	+				+0.8
3,933,458	+				-0.6
3,933,459	-				+1.1
3,933,459	-				-0.7
3,933,460	+				+3.4
3,933,460	+				+0.5
3,933,460	+				+2.5
3,933,460	+				+1.7
3,933,461	-				+0.4
3,933,461	-				+1.0
3,933,461	-				+1.3
3,933,461	-				-0.0
3,933,461	-				+0.3
3,933,461	-				-0.1
3,933,494	+				-1.1
3,933,495	-				-0.7
3,933,495	-				+0.9
3,933,495	-				-0.9
3,933,559	+				+2.4
3,933,563	+				+1.1
3,933,563	+				+1.9
3,933,563	+				+0.8
3,933,586	-		IAI47_18490	0.13	+1.1
3,933,586	-		IAI47_18490	0.13	+2.0
3,933,625	+		IAI47_18490	0.19	+0.8
3,933,626	-		IAI47_18490	0.19	+2.2
3,933,626	-		IAI47_18490	0.19	+2.4
3,933,833	+		IAI47_18490	0.48	+0.9
3,933,833	+		IAI47_18490	0.48	-0.8
3,933,833	+		IAI47_18490	0.48	+1.9
3,933,833	+		IAI47_18490	0.48	-0.9
3,933,834	-		IAI47_18490	0.48	+1.7
3,933,834	-		IAI47_18490	0.48	+2.5
3,933,834	-		IAI47_18490	0.48	+1.2
3,934,032	+		IAI47_18490	0.76	+0.1
3,934,033	-		IAI47_18490	0.76	+2.2
3,934,033	-		IAI47_18490	0.76	+4.4
3,934,072	+		IAI47_18490	0.82	+2.0
3,934,073	-		IAI47_18490	0.82	-1.1
3,934,141	-				+1.5
3,934,141	-				+1.6
3,934,170	+				+0.5
3,934,170	+				+0.6
3,934,171	-				+2.2
3,934,171	-				+1.1
3,934,171	-				+0.1
3,934,171	-				+2.6
3,934,179	+				-1.1
3,934,180	-				+2.4
3,934,180	-				+0.9
3,934,180	-				+1.1
3,934,180	-				+1.7
3,934,180	-				+0.9
3,934,180	-				+1.0
3,934,180	-				+2.1
3,934,180	-				+2.2
3,934,180	-				+1.9
3,934,182	+				+0.8
3,934,182	+				+1.1
3,934,183	-				+1.8
3,934,183	-				+1.1
3,934,202	+				+2.2
3,934,202	+				+0.9
3,934,202	+				+1.6
3,934,202	+				-1.4
3,934,202	+				-1.8
3,934,203	-				-1.8
3,934,205	+				+1.3
3,934,205	+				+1.3
3,934,205	+				+1.0
3,934,206	-				-2.4
3,934,206	-				+0.0
3,934,218	+				+1.1
3,934,288	+		IAI47_18495	0.12	+0.4
3,934,321	+		IAI47_18495	0.16	+0.2
3,934,449	+		IAI47_18495	0.31	-1.0
3,934,449	+		IAI47_18495	0.31	+0.3
3,934,449	+		IAI47_18495	0.31	+0.5
3,934,449	+		IAI47_18495	0.31	-0.6
3,934,449	+		IAI47_18495	0.31	+0.4
3,934,498	+		IAI47_18495	0.36	-1.5
3,934,533	+		IAI47_18495	0.40	-0.8
3,934,533	+		IAI47_18495	0.40	+2.0
3,934,533	+		IAI47_18495	0.40	+1.0
3,934,533	+		IAI47_18495	0.40	+1.1
3,934,533	+		IAI47_18495	0.40	+1.0
3,934,533	+		IAI47_18495	0.40	+0.6
3,934,533	+		IAI47_18495	0.40	+1.1
3,934,533	+		IAI47_18495	0.40	+1.0
3,934,533	+		IAI47_18495	0.40	+1.1
3,934,539	+		IAI47_18495	0.41	+1.8
3,934,603	+		IAI47_18495	0.48	-0.1
3,934,608	+		IAI47_18495	0.49	+0.3
3,934,609	+		IAI47_18495	0.49	-1.0
3,934,648	+		IAI47_18495	0.53	+0.8
3,934,728	+		IAI47_18495	0.62	-0.3
3,934,728	+		IAI47_18495	0.62	-0.4
3,934,735	+		IAI47_18495	0.63	+0.2
3,934,789	+		IAI47_18495	0.69	+0.6
3,934,830	+		IAI47_18495	0.74	+0.7
3,934,830	+		IAI47_18495	0.74	+0.5
3,934,953	+		IAI47_18495	0.88	-0.6
3,934,956	+		IAI47_18495	0.88	+3.0
3,934,956	+		IAI47_18495	0.88	-2.0
3,934,956	+		IAI47_18495	0.88	+1.4
3,934,956	+		IAI47_18495	0.88	+1.8
3,934,956	+		IAI47_18495	0.88	-1.3
3,934,956	+		IAI47_18495	0.88	-0.3
3,934,956	+		IAI47_18495	0.88	+0.1
3,934,956	+		IAI47_18495	0.88	+1.4
3,934,956	+		IAI47_18495	0.88	+2.8
3,934,956	+		IAI47_18495	0.88	+1.5
3,934,956	+		IAI47_18495	0.88	+1.9
3,934,956	+		IAI47_18495	0.88	-0.6
3,934,956	+		IAI47_18495	0.88	+1.2
3,934,997	+				-1.4
3,935,018	+				+0.3
3,935,070	+				+0.3
3,935,071	-				-0.9
3,935,080	+				+0.6
3,935,111	-				-1.2
3,935,111	-				+0.4