Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3786

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
3,886,657	+				+1.1
3,886,657	+				-0.1
3,886,657	+				-0.6
3,886,657	+				-1.3
3,886,657	+				-0.6
3,886,658	-				-0.6
3,886,658	-				+0.1
3,886,864	+		Ga0059261_3785	0.14	-0.1
3,886,864	+		Ga0059261_3785	0.14	+1.0
3,886,864	+		Ga0059261_3785	0.14	+0.1
3,886,864	+		Ga0059261_3785	0.14	+0.2
3,887,084	-		Ga0059261_3785	0.44	-0.0
3,887,126	+		Ga0059261_3785	0.49	+1.0
3,887,126	+		Ga0059261_3785	0.49	+0.9
3,887,126	+		Ga0059261_3785	0.49	+0.8
3,887,191	+		Ga0059261_3785	0.58	+0.6
3,887,192	-		Ga0059261_3785	0.58	-0.1
3,887,260	+		Ga0059261_3785	0.67	+0.1
3,887,260	+		Ga0059261_3785	0.67	+0.2
3,887,260	+		Ga0059261_3785	0.67	-0.4
3,887,819	+				-0.6
3,888,941	+		Ga0059261_3786	0.58	+0.3
3,888,941	+		Ga0059261_3786	0.58	-0.2
3,888,941	+		Ga0059261_3786	0.58	-0.9
3,888,941	+		Ga0059261_3786	0.58	-0.5
3,888,941	+		Ga0059261_3786	0.58	+0.1
3,888,941	+		Ga0059261_3786	0.58	-0.0
3,888,942	-		Ga0059261_3786	0.58	+0.1
3,888,942	-		Ga0059261_3786	0.58	-1.6
3,888,942	-		Ga0059261_3786	0.58	+0.1
3,888,942	-		Ga0059261_3786	0.58	-0.7
3,888,942	-		Ga0059261_3786	0.58	-0.6
3,888,942	-				-0.0
3,888,942	-		Ga0059261_3786	0.58	-0.6
3,889,038	-		Ga0059261_3786	0.62	-0.7
3,889,038	-		Ga0059261_3786	0.62	-0.2
3,889,196	+		Ga0059261_3786	0.69	-0.4
3,889,197	-		Ga0059261_3786	0.69	-0.3
3,889,240	+		Ga0059261_3786	0.71	-0.3
3,889,308	-		Ga0059261_3786	0.74	-1.3
3,889,567	+		Ga0059261_3786	0.86	-1.3
3,889,882	+				-0.1
3,889,890	-				+0.3
3,889,890	-				+0.4
3,890,048	+		Ga0059261_3787	0.19	+0.2
3,890,048	+		Ga0059261_3787	0.19	+0.3
3,890,048	+		Ga0059261_3787	0.19	+0.1
3,890,048	+				-0.6
3,890,048	+		Ga0059261_3787	0.19	-0.3
3,890,048	+		Ga0059261_3787	0.19	-0.6
3,890,048	+		Ga0059261_3787	0.19	-0.0
3,890,049	-		Ga0059261_3787	0.19	-0.4
3,890,049	-		Ga0059261_3787	0.19	+0.3
3,890,049	-		Ga0059261_3787	0.19	-0.3
3,890,049	-		Ga0059261_3787	0.19	+0.2
3,890,049	-		Ga0059261_3787	0.19	-0.2
3,890,076	+		Ga0059261_3787	0.22	-0.9
3,890,076	+		Ga0059261_3787	0.22	-1.2
3,890,076	+		Ga0059261_3787	0.22	-0.2
3,890,076	+		Ga0059261_3787	0.22	-0.2
3,890,076	+		Ga0059261_3787	0.22	-0.2
3,890,076	+		Ga0059261_3787	0.22	+0.9
3,890,077	-		Ga0059261_3787	0.22	-0.3
3,890,077	-		Ga0059261_3787	0.22	-0.2
3,890,692	+				+0.1
3,890,692	+				-0.2
3,890,692	+				+1.8
3,890,692	+				+0.3
3,890,692	+				+0.3
3,890,692	+				-0.9
3,890,693	-				-0.4
3,890,693	-				-1.9
3,890,693	-				+0.2
3,890,693	-				-0.0
3,890,693	-				+0.3
3,890,734	-				+0.7
3,890,821	+				-0.6
3,890,822	-				+0.3
3,890,865	+		Ga0059261_3788	0.13	+0.1
3,890,865	+		Ga0059261_3788	0.13	-0.8
3,890,865	+		Ga0059261_3788	0.13	-0.4
3,890,865	+		Ga0059261_3788	0.13	+0.3
3,890,866	-		Ga0059261_3788	0.13	+1.0
3,890,866	-		Ga0059261_3788	0.13	+0.3
3,890,866	-		Ga0059261_3788	0.13	+0.5
3,890,870	+		Ga0059261_3788	0.14	-0.5
3,890,870	+		Ga0059261_3788	0.14	-0.7
3,890,870	+				-0.6
3,890,870	+		Ga0059261_3788	0.14	+1.0
3,890,870	+		Ga0059261_3788	0.14	-0.8
3,890,870	+		Ga0059261_3788	0.14	+0.3
3,890,870	+		Ga0059261_3788	0.14	-0.6
3,890,870	+		Ga0059261_3788	0.14	-0.5
3,890,870	+		Ga0059261_3788	0.14	-0.1
3,890,870	+		Ga0059261_3788	0.14	+0.2
3,890,870	+		Ga0059261_3788	0.14	+0.7
3,890,871	-		Ga0059261_3788	0.15	-1.3
3,890,871	-		Ga0059261_3788	0.15	+0.4
3,890,871	-		Ga0059261_3788	0.15	-0.4
3,890,873	+		Ga0059261_3788	0.15	+0.3
3,890,873	+		Ga0059261_3788	0.15	+0.2
3,890,873	+		Ga0059261_3788	0.15	+0.3
3,890,873	+		Ga0059261_3788	0.15	-0.2
3,890,873	+		Ga0059261_3788	0.15	+0.5
3,890,874	-		Ga0059261_3788	0.15	-0.3
3,890,874	-		Ga0059261_3788	0.15	+0.3
3,890,874	-		Ga0059261_3788	0.15	-0.2
3,890,874	-		Ga0059261_3788	0.15	-0.4