Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3552

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
3,679,837	+		Ga0059261_3551	0.78	+0.5
3,679,838	-		Ga0059261_3551	0.78	-0.2
3,679,858	+		Ga0059261_3551	0.78	-0.2
3,680,024	+		Ga0059261_3551	0.83	+0.4
3,680,025	-		Ga0059261_3551	0.83	-0.1
3,680,025	-		Ga0059261_3551	0.83	-1.1
3,680,053	+		Ga0059261_3551	0.84	-0.4
3,680,053	+		Ga0059261_3551	0.84	+1.2
3,680,053	+		Ga0059261_3551	0.84	+0.1
3,680,053	+		Ga0059261_3551	0.84	-0.6
3,680,053	+				+1.0
3,680,053	+		Ga0059261_3551	0.84	+0.3
3,680,053	+		Ga0059261_3551	0.84	-0.2
3,680,054	-		Ga0059261_3551	0.84	+0.1
3,680,054	-		Ga0059261_3551	0.84	-0.6
3,680,054	-		Ga0059261_3551	0.84	+2.0
3,680,096	-		Ga0059261_3551	0.86	-0.7
3,680,096	-		Ga0059261_3551	0.86	-0.1
3,680,107	+		Ga0059261_3551	0.86	-0.2
3,680,107	+		Ga0059261_3551	0.86	-2.4
3,680,107	+		Ga0059261_3551	0.86	+0.1
3,680,107	+		Ga0059261_3551	0.86	-0.3
3,680,107	+		Ga0059261_3551	0.86	-0.4
3,680,108	-		Ga0059261_3551	0.86	-1.0
3,680,108	-		Ga0059261_3551	0.86	+0.6
3,680,108	-		Ga0059261_3551	0.86	-0.3
3,680,108	-		Ga0059261_3551	0.86	-0.6
3,680,108	-		Ga0059261_3551	0.86	-0.1
3,680,108	-		Ga0059261_3551	0.86	-0.4
3,680,113	+		Ga0059261_3551	0.86	+1.1
3,680,113	+		Ga0059261_3551	0.86	-0.2
3,680,113	+		Ga0059261_3551	0.86	-1.0
3,680,113	+		Ga0059261_3551	0.86	+0.5
3,680,113	+		Ga0059261_3551	0.86	-0.2
3,680,113	+		Ga0059261_3551	0.86	-1.0
3,680,113	+		Ga0059261_3551	0.86	+0.4
3,680,113	+		Ga0059261_3551	0.86	-0.7
3,680,113	+		Ga0059261_3551	0.86	-0.6
3,680,114	-		Ga0059261_3551	0.86	-0.2
3,680,114	-		Ga0059261_3551	0.86	-1.2
3,680,114	-		Ga0059261_3551	0.86	-0.6
3,680,114	-		Ga0059261_3551	0.86	+0.2
3,680,114	-		Ga0059261_3551	0.86	-0.7
3,680,114	-		Ga0059261_3551	0.86	-0.4
3,680,114	-		Ga0059261_3551	0.86	+0.6
3,680,125	+		Ga0059261_3551	0.87	+0.3
3,680,125	+		Ga0059261_3551	0.87	+1.0
3,680,125	+		Ga0059261_3551	0.87	+0.8
3,680,125	+		Ga0059261_3551	0.87	-0.3
3,680,126	-		Ga0059261_3551	0.87	+0.8
3,680,126	-		Ga0059261_3551	0.87	-0.4
3,680,126	-		Ga0059261_3551	0.87	-1.2
3,680,126	-		Ga0059261_3551	0.87	+0.0
3,680,263	+				-1.2
3,680,263	+				+1.1
3,680,263	+				-0.6
3,680,263	+				+1.6
3,680,263	+				+0.1
3,680,264	-				+0.0
3,680,264	-				-0.5
3,680,264	-				+0.5
3,680,264	-				+1.0
3,680,264	-				+1.6
3,680,264	-				+0.0
3,680,314	+				+0.0
3,680,314	+				-0.1
3,680,314	+				+0.2
3,680,315	-				+0.6
3,680,315	-				-1.4
3,680,315	-				+0.2
3,680,315	-				-0.7
3,680,315	-				+0.0
3,680,317	+				+1.5
3,680,317	+				+2.6
3,680,318	-				-0.1
3,680,318	-				-1.0
3,680,318	-				-0.5
3,680,318	-				+0.5
3,680,318	-				+0.5
3,680,347	+				+1.8
3,680,347	+				-0.6
3,680,348	-				-0.4
3,680,348	-				-0.3
3,680,359	+				+0.7
3,680,359	+				+0.8
3,680,360	-				+0.4
3,680,440	+				+0.0
3,680,440	+				+0.5
3,680,440	+				+1.4
3,680,441	-				+1.0
3,680,441	-				-0.5
3,680,441	-				-0.7
3,680,441	-				-0.2
3,680,441	-				+0.3
3,680,538	+				+0.2
3,680,539	-				-1.8
3,680,577	-				-0.4
3,680,582	-				-0.8
3,680,638	-				+0.1
3,680,727	-				-0.2
3,680,731	-				-0.3
3,680,783	+				-1.2
3,680,819	+		Ga0059261_3552	0.16	-0.3
3,680,819	+		Ga0059261_3552	0.16	-0.1
3,680,835	+		Ga0059261_3552	0.19	+0.1
3,680,835	+		Ga0059261_3552	0.19	-0.3
3,680,836	-		Ga0059261_3552	0.19	-1.0
3,680,838	-		Ga0059261_3552	0.20	-0.6
3,680,874	-				+1.0
3,680,913	-		Ga0059261_3552	0.35	-0.2
3,680,913	-		Ga0059261_3552	0.35	-0.9
3,680,981	+		Ga0059261_3552	0.49	-0.6
3,680,982	-		Ga0059261_3552	0.49	-0.4
3,680,990	-		Ga0059261_3552	0.50	+0.3
3,681,054	+		Ga0059261_3552	0.63	-1.1
3,681,054	+		Ga0059261_3552	0.63	+0.0
3,681,054	+		Ga0059261_3552	0.63	-0.4
3,681,054	+		Ga0059261_3552	0.63	-0.9
3,681,055	-		Ga0059261_3552	0.64	-0.2
3,681,055	-		Ga0059261_3552	0.64	-1.0
3,681,055	-		Ga0059261_3552	0.64	-0.1
3,681,055	-		Ga0059261_3552	0.64	+0.1
3,681,063	-		Ga0059261_3552	0.65	-1.0
3,681,093	+		Ga0059261_3552	0.71	-0.5
3,681,094	-		Ga0059261_3552	0.72	-0.1
3,681,161	+		Ga0059261_3552	0.85	+0.2
3,681,271	+				+0.2
3,681,272	-				-0.2
3,681,344	+				+0.4
3,681,364	+				-0.9
3,681,410	+				+1.0
3,681,411	-				-0.2
3,681,411	-				-0.3
3,681,420	-				-0.2
3,681,420	-				-0.7
3,681,420	-				+0.2
3,681,420	-				+0.3
3,681,452	+				-0.1
3,681,452	+				+0.0
3,681,452	+				+1.0
3,681,452	+				+0.1
3,681,453	-				-0.6
3,681,453	-				-0.6
3,681,453	-				-1.3
3,681,528	+				-0.3
3,681,528	+				-2.6
3,681,528	+				+1.3
3,681,528	+				-0.2
3,681,529	-				-0.1
3,681,529	-				+0.1
3,681,559	+				+0.5
3,681,559	+				-0.2
3,681,559	+				-0.4
3,681,559	+				-0.5
3,681,559	+				-0.8
3,681,559	+				-1.8
3,681,559	+				-0.3
3,681,560	-				+0.0
3,681,560	-				-0.6
3,681,560	-				+0.7
3,681,560	-				-0.7
3,681,560	-				-0.4
3,681,560	-				-0.3
3,681,560	-				+0.4
3,681,560	-				-2.2
3,681,637	-				+0.3
3,681,637	-				+2.0
3,681,637	-				+0.3
3,681,637	-				+0.7
3,681,637	-				-1.6
3,681,721	+				+0.6
3,681,887	+		Ga0059261_3553	0.13	-0.4
3,681,968	-				+1.4
3,681,992	+		Ga0059261_3553	0.17	-1.0
3,681,993	-		Ga0059261_3553	0.17	-0.4
3,681,993	-		Ga0059261_3553	0.17	+0.1
3,681,993	-		Ga0059261_3553	0.17	+1.2
3,682,067	+		Ga0059261_3553	0.20	-0.9
3,682,067	+		Ga0059261_3553	0.20	-1.1
3,682,067	+		Ga0059261_3553	0.20	+0.9
3,682,067	+		Ga0059261_3553	0.20	-0.7
3,682,067	+		Ga0059261_3553	0.20	-0.6
3,682,067	+		Ga0059261_3553	0.20	-0.3
3,682,067	+		Ga0059261_3553	0.20	-0.5
3,682,067	+		Ga0059261_3553	0.20	-0.3
3,682,067	+		Ga0059261_3553	0.20	-0.4
3,682,067	+		Ga0059261_3553	0.20	+0.2
3,682,068	-		Ga0059261_3553	0.20	-0.5
3,682,068	-		Ga0059261_3553	0.20	-0.5
3,682,068	-		Ga0059261_3553	0.20	-0.2
3,682,068	-		Ga0059261_3553	0.20	+0.3
3,682,136	+		Ga0059261_3553	0.23	-1.3
3,682,136	+				+0.0
3,682,136	+		Ga0059261_3553	0.23	+1.0
3,682,136	+		Ga0059261_3553	0.23	-0.4
3,682,136	+		Ga0059261_3553	0.23	+0.9
3,682,137	-		Ga0059261_3553	0.23	+0.3
3,682,137	-		Ga0059261_3553	0.23	-0.3
3,682,137	-		Ga0059261_3553	0.23	+0.2
3,682,137	-		Ga0059261_3553	0.23	-0.1
3,682,230	+		Ga0059261_3553	0.27	+0.4