Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1768

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
1,874,128	+				+0.4
1,874,128	+				+0.2
1,874,128	+				+0.3
1,874,129	-				-0.3
1,874,129	-				-0.3
1,874,129	-				+0.6
1,874,129	-				-0.3
1,874,152	+				+0.1
1,874,152	+				+0.9
1,874,152	+				-0.4
1,874,168	+				-2.6
1,874,168	+				+0.2
1,874,169	-				-0.9
1,874,169	-				-1.2
1,874,169	-				-0.5
1,874,169	-				-1.1
1,874,280	+		Ga0059261_1767	0.21	+0.9
1,874,280	+		Ga0059261_1767	0.21	-0.2
1,874,280	+		Ga0059261_1767	0.21	+0.0
1,874,281	-		Ga0059261_1767	0.21	-0.7
1,874,281	-		Ga0059261_1767	0.21	-0.1
1,874,281	-		Ga0059261_1767	0.21	-0.3
1,874,281	-		Ga0059261_1767	0.21	+0.1
1,874,281	-		Ga0059261_1767	0.21	-0.7
1,874,322	+		Ga0059261_1767	0.25	+0.7
1,874,322	+		Ga0059261_1767	0.25	+0.0
1,874,417	-		Ga0059261_1767	0.34	-0.6
1,874,433	+				+0.1
1,874,433	+				+0.7
1,874,433	+		Ga0059261_1767	0.36	+0.4
1,874,433	+		Ga0059261_1767	0.36	-1.5
1,874,434	-		Ga0059261_1767	0.36	+0.6
1,874,434	-		Ga0059261_1767	0.36	+0.7
1,874,434	-		Ga0059261_1767	0.36	+0.0
1,874,434	-		Ga0059261_1767	0.36	-0.3
1,874,434	-		Ga0059261_1767	0.36	+0.7
1,874,434	-		Ga0059261_1767	0.36	+0.2
1,874,564	+		Ga0059261_1767	0.49	+0.4
1,874,564	+		Ga0059261_1767	0.49	-0.4
1,874,564	+		Ga0059261_1767	0.49	-1.5
1,874,565	-		Ga0059261_1767	0.49	+0.8
1,874,565	-		Ga0059261_1767	0.49	-1.3
1,874,565	-		Ga0059261_1767	0.49	-0.1
1,874,597	-				-0.5
1,874,606	-		Ga0059261_1767	0.53	-0.1
1,874,633	+		Ga0059261_1767	0.55	+0.5
1,874,633	+		Ga0059261_1767	0.55	-0.2
1,874,634	-		Ga0059261_1767	0.56	-0.2
1,874,634	-		Ga0059261_1767	0.56	+0.9
1,874,634	-		Ga0059261_1767	0.56	-0.9
1,874,634	-		Ga0059261_1767	0.56	+0.0
1,874,634	-		Ga0059261_1767	0.56	+0.4
1,874,634	-		Ga0059261_1767	0.56	+1.4
1,874,690	-		Ga0059261_1767	0.61	-0.9
1,874,690	-		Ga0059261_1767	0.61	-0.1
1,874,706	+		Ga0059261_1767	0.63	+1.1
1,874,706	+		Ga0059261_1767	0.63	+0.1
1,874,706	+		Ga0059261_1767	0.63	+0.3
1,874,707	-		Ga0059261_1767	0.63	-0.3
1,874,733	+		Ga0059261_1767	0.65	-0.5
1,874,733	+		Ga0059261_1767	0.65	-1.0
1,874,734	-		Ga0059261_1767	0.65	+0.2
1,874,890	+		Ga0059261_1767	0.81	+0.4
1,874,890	+		Ga0059261_1767	0.81	+0.4
1,874,890	+		Ga0059261_1767	0.81	-0.5
1,874,891	-		Ga0059261_1767	0.81	+0.3
1,874,891	-				+0.1
1,874,891	-		Ga0059261_1767	0.81	-0.5
1,874,911	+		Ga0059261_1767	0.83	-0.2
1,874,911	+		Ga0059261_1767	0.83	+0.1
1,874,911	+		Ga0059261_1767	0.83	-0.4
1,874,911	+		Ga0059261_1767	0.83	+0.9
1,874,912	-		Ga0059261_1767	0.83	+0.6
1,874,915	+		Ga0059261_1767	0.83	-1.7
1,874,915	+		Ga0059261_1767	0.83	-0.2
1,874,915	+		Ga0059261_1767	0.83	-0.3
1,874,916	-		Ga0059261_1767	0.83	-0.1
1,874,916	-		Ga0059261_1767	0.83	+0.5
1,875,026	+				+0.5
1,875,026	+				+0.7
1,875,027	-				-0.7
1,875,027	-				-0.7
1,875,027	-				-1.0
1,875,027	-				+0.4
1,875,027	-				+1.4
1,875,075	+				-0.4
1,875,076	-				+0.7
1,875,076	-				-0.1
1,875,079	+				+0.3
1,875,079	+				-0.3
1,875,079	+				-0.5
1,875,079	+				-0.1
1,875,079	+				+0.7
1,875,080	-				-0.2
1,875,080	-				-1.4
1,875,080	-				-0.3
1,875,080	-				+0.7
1,875,101	+				-0.5
1,875,102	-				-0.3
1,875,102	-				+0.2
1,875,102	-				-0.2
1,875,102	-				-0.4
1,875,104	+				+0.1
1,875,104	+				+0.8
1,875,104	+				-0.8
1,875,136	+				-0.3
1,875,136	+				+0.1
1,875,136	+				-0.1
1,875,137	-				+0.2
1,875,137	-				+0.2
1,875,227	-		Ga0059261_1768	0.21	+0.4
1,875,631	+		Ga0059261_1768	0.90	+0.3
1,875,631	+		Ga0059261_1768	0.90	+0.3
1,875,632	-				-0.2
1,875,706	+				-0.5
1,875,707	-				+0.5
1,875,768	+				-0.2
1,875,768	+				-0.1
1,875,768	+				-1.2
1,875,768	+				-0.3
1,875,769	-				+0.3
1,875,769	-				-1.0
1,875,849	+				+0.4
1,875,849	+				-2.1
1,875,850	-				+0.2
1,875,850	-				+0.9
1,875,850	-				+0.3
1,875,850	-				+1.1
1,875,854	+				+0.5
1,875,854	+				-0.3
1,875,855	-				+0.1
1,875,855	-				+0.5
1,875,877	+		Ga0059261_1769	0.13	+0.2
1,875,878	-		Ga0059261_1769	0.14	+0.1
1,875,881	+				-0.5
1,875,943	+		Ga0059261_1769	0.28	+0.4
1,876,063	+		Ga0059261_1769	0.54	+0.1
1,876,117	+		Ga0059261_1769	0.66	+0.6
1,876,117	+		Ga0059261_1769	0.66	+0.9
1,876,118	-		Ga0059261_1769	0.66	-0.2
1,876,118	-		Ga0059261_1769	0.66	-0.9
1,876,118	-		Ga0059261_1769	0.66	+0.3
1,876,118	-		Ga0059261_1769	0.66	-0.7
1,876,118	-		Ga0059261_1769	0.66	-0.5
1,876,118	-		Ga0059261_1769	0.66	+0.6
1,876,118	-		Ga0059261_1769	0.66	+0.0
1,876,118	-		Ga0059261_1769	0.66	-1.1
1,876,118	-				+1.5
1,876,118	-		Ga0059261_1769	0.66	+0.9
1,876,138	+		Ga0059261_1769	0.70	+0.2
1,876,138	+		Ga0059261_1769	0.70	-1.3
1,876,138	+		Ga0059261_1769	0.70	-1.3
1,876,138	+		Ga0059261_1769	0.70	+0.1
1,876,138	+		Ga0059261_1769	0.70	+1.7
1,876,139	-		Ga0059261_1769	0.70	+1.3