Experiment: Chloramphenicol 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0809 and Ga0059261_0810 are separated by 46 nucleotides Ga0059261_0810 and Ga0059261_0811 overlap by 8 nucleotides Ga0059261_0811 and Ga0059261_0812 are separated by 70 nucleotides
Ga0059261_0809: Ga0059261_0809 - 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.39), at 851,493 to 852,410
_0809
Ga0059261_0810: Ga0059261_0810 - Predicted Zn-dependent proteases and their inactivated homologs, at 852,457 to 853,803
_0810
Ga0059261_0811: Ga0059261_0811 - Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family, at 853,796 to 854,584
_0811
Ga0059261_0812: Ga0059261_0812 - Short-chain alcohol dehydrogenase of unknown specificity, at 854,655 to 855,416
_0812
Position (kb) 852
853
854 Strain fitness (log2 ratio) -1
0
1 at 851.479 kb on + strand at 851.479 kb on + strand at 851.571 kb on + strand at 852.445 kb on + strand at 852.445 kb on + strand at 852.445 kb on + strand at 852.446 kb on - strand at 852.446 kb on - strand at 852.970 kb on + strand, within Ga0059261_0810 at 852.970 kb on + strand, within Ga0059261_0810 at 852.971 kb on - strand, within Ga0059261_0810 at 853.039 kb on + strand, within Ga0059261_0810 at 853.039 kb on + strand, within Ga0059261_0810 at 853.039 kb on + strand, within Ga0059261_0810 at 853.040 kb on - strand, within Ga0059261_0810 at 853.472 kb on + strand, within Ga0059261_0810 at 854.206 kb on + strand, within Ga0059261_0811 at 854.206 kb on + strand, within Ga0059261_0811 at 854.207 kb on - strand, within Ga0059261_0811 at 854.215 kb on + strand, within Ga0059261_0811 at 854.438 kb on - strand, within Ga0059261_0811
Per-strain Table
Position Strand Gene LocusTag Fraction Chloramphenicol 0.0001 mg/ml remove 851,479 + -0.6 851,479 + +0.4 851,571 + +0.6 852,445 + -0.3 852,445 + +0.1 852,445 + +0.7 852,446 - -0.0 852,446 - -1.6 852,970 + Ga0059261_0810 0.38 -0.9 852,970 + Ga0059261_0810 0.38 +0.2 852,971 - Ga0059261_0810 0.38 -1.4 853,039 + Ga0059261_0810 0.43 -0.9 853,039 + Ga0059261_0810 0.43 -0.3 853,039 + Ga0059261_0810 0.43 +1.1 853,040 - Ga0059261_0810 0.43 -0.0 853,472 + Ga0059261_0810 0.75 +0.3 854,206 + Ga0059261_0811 0.52 +0.6 854,206 + Ga0059261_0811 0.52 -0.0 854,207 - Ga0059261_0811 0.52 +0.2 854,215 + Ga0059261_0811 0.53 -1.4 854,438 - Ga0059261_0811 0.81 -0.2
Or see this region's nucleotide sequence