Experiment: Chloramphenicol 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0787 and Ga0059261_0788 are separated by 103 nucleotides Ga0059261_0788 and Ga0059261_0789 are separated by 80 nucleotides Ga0059261_0789 and Ga0059261_0790 overlap by 4 nucleotides Ga0059261_0790 and Ga0059261_0791 are separated by 20 nucleotides
Ga0059261_0787: Ga0059261_0787 - Mg chelatase-related protein, at 829,342 to 830,850
_0787
Ga0059261_0788: Ga0059261_0788 - hypothetical protein, at 830,954 to 831,238
_0788
Ga0059261_0789: Ga0059261_0789 - ribonuclease P protein component, eubacterial, at 831,319 to 831,798
_0789
Ga0059261_0790: Ga0059261_0790 - putative membrane protein insertion efficiency factor, at 831,795 to 832,007
_0790
Ga0059261_0791: Ga0059261_0791 - membrane protein insertase, YidC/Oxa1 family, N-terminal domain, at 832,028 to 833,788
_0791
Position (kb) 831
832
833 Strain fitness (log2 ratio) -2
-1
0
1 at 830.822 kb on + strand at 830.822 kb on + strand at 830.822 kb on + strand at 830.822 kb on + strand at 830.823 kb on - strand at 830.832 kb on + strand at 830.832 kb on + strand at 830.850 kb on + strand at 830.850 kb on + strand at 830.850 kb on + strand at 830.850 kb on + strand at 830.850 kb on + strand at 830.850 kb on + strand at 830.850 kb on + strand at 830.851 kb on - strand at 830.851 kb on - strand at 830.877 kb on - strand at 831.873 kb on + strand, within Ga0059261_0790 at 831.894 kb on + strand, within Ga0059261_0790 at 831.894 kb on + strand, within Ga0059261_0790 at 831.894 kb on + strand at 831.894 kb on + strand, within Ga0059261_0790 at 831.894 kb on + strand, within Ga0059261_0790
Per-strain Table
Position Strand Gene LocusTag Fraction Chloramphenicol 0.0001 mg/ml remove 830,822 + +0.6 830,822 + -0.7 830,822 + +0.7 830,822 + -0.7 830,823 - +0.8 830,832 + -0.4 830,832 + +0.3 830,850 + -0.3 830,850 + -0.7 830,850 + -1.0 830,850 + -1.1 830,850 + -0.3 830,850 + +0.2 830,850 + -0.0 830,851 - -0.4 830,851 - +0.5 830,877 - +0.5 831,873 + Ga0059261_0790 0.37 +0.3 831,894 + Ga0059261_0790 0.46 -2.1 831,894 + Ga0059261_0790 0.46 -0.3 831,894 + -0.5 831,894 + Ga0059261_0790 0.46 -1.4 831,894 + Ga0059261_0790 0.46 -0.3
Or see this region's nucleotide sequence