Experiment: Chloramphenicol 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0159 and Ga0059261_0160 overlap by 46 nucleotides Ga0059261_0160 and Ga0059261_0161 overlap by 4 nucleotides Ga0059261_0161 and Ga0059261_0162 overlap by 1 nucleotides Ga0059261_0162 and Ga0059261_0163 are separated by 158 nucleotides
Ga0059261_0159: Ga0059261_0159 - Transcriptional regulator, at 149,737 to 150,672
_0159
Ga0059261_0160: Ga0059261_0160 - Molybdopterin converting factor, large subunit, at 150,627 to 151,085
_0160
Ga0059261_0161: Ga0059261_0161 - molybdopterin converting factor, subunit 1, non-archaeal, at 151,082 to 151,333
_0161
Ga0059261_0162: Ga0059261_0162 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 151,333 to 151,887
_0162
Ga0059261_0163: Ga0059261_0163 - Major Facilitator Superfamily, at 152,046 to 153,341
_0163
Position (kb) 151
152 Strain fitness (log2 ratio) -2
-1
0
1 at 150.202 kb on + strand, within Ga0059261_0159 at 150.202 kb on + strand, within Ga0059261_0159 at 150.203 kb on - strand, within Ga0059261_0159 at 150.203 kb on - strand, within Ga0059261_0159 at 150.203 kb on - strand, within Ga0059261_0159 at 150.203 kb on - strand, within Ga0059261_0159 at 150.274 kb on + strand, within Ga0059261_0159 at 150.274 kb on + strand, within Ga0059261_0159 at 150.274 kb on + strand, within Ga0059261_0159 at 150.275 kb on - strand, within Ga0059261_0159 at 150.275 kb on - strand, within Ga0059261_0159 at 150.275 kb on - strand, within Ga0059261_0159 at 150.418 kb on - strand, within Ga0059261_0159 at 150.510 kb on + strand, within Ga0059261_0159 at 150.510 kb on + strand, within Ga0059261_0159 at 150.510 kb on + strand, within Ga0059261_0159 at 150.510 kb on + strand, within Ga0059261_0159 at 150.511 kb on - strand, within Ga0059261_0159 at 150.511 kb on - strand, within Ga0059261_0159 at 150.511 kb on - strand, within Ga0059261_0159 at 150.511 kb on - strand, within Ga0059261_0159 at 150.511 kb on - strand, within Ga0059261_0159 at 150.511 kb on - strand, within Ga0059261_0159 at 150.511 kb on - strand, within Ga0059261_0159 at 150.940 kb on + strand, within Ga0059261_0160 at 151.040 kb on - strand at 151.130 kb on + strand, within Ga0059261_0161 at 151.131 kb on - strand, within Ga0059261_0161 at 151.131 kb on - strand, within Ga0059261_0161 at 151.131 kb on - strand, within Ga0059261_0161 at 151.131 kb on - strand, within Ga0059261_0161 at 151.131 kb on - strand, within Ga0059261_0161 at 151.320 kb on + strand at 151.320 kb on + strand at 151.321 kb on - strand at 151.321 kb on - strand at 151.338 kb on + strand at 151.338 kb on + strand at 151.338 kb on + strand at 151.338 kb on + strand at 151.338 kb on + strand at 151.338 kb on + strand at 151.338 kb on + strand at 151.339 kb on - strand at 151.339 kb on - strand at 151.339 kb on - strand at 151.339 kb on - strand at 151.339 kb on - strand at 151.339 kb on - strand at 151.945 kb on + strand at 151.945 kb on + strand at 152.005 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chloramphenicol 0.0001 mg/ml remove 150,202 + Ga0059261_0159 0.50 +0.7 150,202 + Ga0059261_0159 0.50 -0.7 150,203 - Ga0059261_0159 0.50 +0.1 150,203 - Ga0059261_0159 0.50 -0.7 150,203 - Ga0059261_0159 0.50 -1.2 150,203 - Ga0059261_0159 0.50 +1.3 150,274 + Ga0059261_0159 0.57 -0.5 150,274 + Ga0059261_0159 0.57 -1.3 150,274 + Ga0059261_0159 0.57 +1.1 150,275 - Ga0059261_0159 0.57 -0.2 150,275 - Ga0059261_0159 0.57 -0.6 150,275 - Ga0059261_0159 0.57 -1.0 150,418 - Ga0059261_0159 0.73 -0.9 150,510 + Ga0059261_0159 0.83 -1.2 150,510 + Ga0059261_0159 0.83 -0.4 150,510 + Ga0059261_0159 0.83 +0.3 150,510 + Ga0059261_0159 0.83 -0.9 150,511 - Ga0059261_0159 0.83 -0.6 150,511 - Ga0059261_0159 0.83 +0.3 150,511 - Ga0059261_0159 0.83 -0.6 150,511 - Ga0059261_0159 0.83 -0.6 150,511 - Ga0059261_0159 0.83 +0.0 150,511 - Ga0059261_0159 0.83 +0.7 150,511 - Ga0059261_0159 0.83 -1.1 150,940 + Ga0059261_0160 0.68 -0.1 151,040 - -0.3 151,130 + Ga0059261_0161 0.19 -0.3 151,131 - Ga0059261_0161 0.19 -0.9 151,131 - Ga0059261_0161 0.19 +0.1 151,131 - Ga0059261_0161 0.19 -1.7 151,131 - Ga0059261_0161 0.19 +0.6 151,131 - Ga0059261_0161 0.19 -1.3 151,320 + -0.1 151,320 + -0.6 151,321 - -0.4 151,321 - -0.3 151,338 + +0.0 151,338 + -0.2 151,338 + +1.0 151,338 + +1.0 151,338 + -1.3 151,338 + -1.2 151,338 + +0.2 151,339 - -0.6 151,339 - -0.9 151,339 - +0.5 151,339 - -0.6 151,339 - -0.2 151,339 - +0.5 151,945 + -0.5 151,945 + +0.2 152,005 - -1.8
Or see this region's nucleotide sequence