Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS23565 and EX31_RS23570 overlap by 7 nucleotides EX31_RS23570 and EX31_RS23575 overlap by 1 nucleotides
EX31_RS23565: EX31_RS23565 - galactose-1-epimerase, at 478,019 to 479,065
_RS23565
EX31_RS23570: EX31_RS23570 - galactokinase, at 479,059 to 480,207
_RS23570
EX31_RS23575: EX31_RS23575 - galactose-1-phosphate uridylyltransferase, at 480,207 to 481,256
_RS23575
Position (kb) 479
480
481 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 478.152 kb on + strand, within EX31_RS23565 at 478.153 kb on - strand, within EX31_RS23565 at 478.161 kb on + strand, within EX31_RS23565 at 478.162 kb on - strand, within EX31_RS23565 at 478.209 kb on + strand, within EX31_RS23565 at 478.210 kb on - strand, within EX31_RS23565 at 478.210 kb on - strand, within EX31_RS23565 at 478.210 kb on - strand, within EX31_RS23565 at 478.210 kb on - strand, within EX31_RS23565 at 478.234 kb on + strand, within EX31_RS23565 at 478.235 kb on - strand, within EX31_RS23565 at 478.235 kb on - strand, within EX31_RS23565 at 478.320 kb on + strand, within EX31_RS23565 at 478.321 kb on - strand, within EX31_RS23565 at 478.321 kb on - strand, within EX31_RS23565 at 478.321 kb on - strand, within EX31_RS23565 at 478.333 kb on - strand, within EX31_RS23565 at 478.333 kb on - strand, within EX31_RS23565 at 478.533 kb on + strand, within EX31_RS23565 at 478.533 kb on + strand, within EX31_RS23565 at 478.533 kb on + strand, within EX31_RS23565 at 478.534 kb on - strand, within EX31_RS23565 at 478.567 kb on + strand, within EX31_RS23565 at 478.620 kb on + strand, within EX31_RS23565 at 478.623 kb on + strand, within EX31_RS23565 at 478.624 kb on - strand, within EX31_RS23565 at 478.715 kb on - strand, within EX31_RS23565 at 478.715 kb on - strand, within EX31_RS23565 at 478.826 kb on - strand, within EX31_RS23565 at 478.837 kb on - strand, within EX31_RS23565 at 478.860 kb on + strand, within EX31_RS23565 at 478.878 kb on + strand, within EX31_RS23565 at 478.878 kb on + strand, within EX31_RS23565 at 478.878 kb on + strand, within EX31_RS23565 at 478.878 kb on + strand, within EX31_RS23565 at 478.879 kb on - strand, within EX31_RS23565 at 478.879 kb on - strand, within EX31_RS23565 at 478.879 kb on - strand, within EX31_RS23565 at 478.879 kb on - strand, within EX31_RS23565 at 479.061 kb on - strand at 479.061 kb on - strand at 479.061 kb on - strand at 479.061 kb on - strand at 479.065 kb on + strand at 479.065 kb on + strand at 479.066 kb on - strand at 479.066 kb on - strand at 479.066 kb on - strand at 479.066 kb on - strand at 479.096 kb on + strand at 479.096 kb on + strand at 479.096 kb on + strand at 479.097 kb on - strand at 479.130 kb on - strand at 479.130 kb on - strand at 479.165 kb on - strand at 479.268 kb on + strand, within EX31_RS23570 at 479.385 kb on + strand, within EX31_RS23570 at 479.541 kb on - strand, within EX31_RS23570 at 479.541 kb on - strand, within EX31_RS23570 at 479.679 kb on + strand, within EX31_RS23570 at 479.680 kb on - strand, within EX31_RS23570 at 479.680 kb on - strand, within EX31_RS23570 at 479.680 kb on - strand, within EX31_RS23570 at 479.680 kb on - strand, within EX31_RS23570 at 479.680 kb on - strand, within EX31_RS23570 at 479.692 kb on - strand, within EX31_RS23570 at 479.692 kb on - strand, within EX31_RS23570 at 479.692 kb on - strand, within EX31_RS23570 at 479.703 kb on + strand, within EX31_RS23570 at 479.704 kb on - strand, within EX31_RS23570 at 479.774 kb on + strand, within EX31_RS23570 at 479.775 kb on - strand, within EX31_RS23570 at 479.775 kb on - strand, within EX31_RS23570 at 479.775 kb on - strand, within EX31_RS23570 at 479.775 kb on - strand, within EX31_RS23570 at 479.775 kb on - strand, within EX31_RS23570 at 479.924 kb on + strand, within EX31_RS23570 at 479.924 kb on + strand, within EX31_RS23570 at 479.924 kb on + strand, within EX31_RS23570 at 479.924 kb on + strand, within EX31_RS23570 at 479.924 kb on + strand, within EX31_RS23570 at 479.924 kb on + strand, within EX31_RS23570 at 479.924 kb on + strand, within EX31_RS23570 at 479.924 kb on + strand, within EX31_RS23570 at 479.925 kb on - strand, within EX31_RS23570 at 479.925 kb on - strand, within EX31_RS23570 at 479.925 kb on - strand, within EX31_RS23570 at 479.925 kb on - strand, within EX31_RS23570 at 479.925 kb on - strand, within EX31_RS23570 at 479.925 kb on - strand, within EX31_RS23570 at 479.958 kb on + strand, within EX31_RS23570 at 479.959 kb on - strand, within EX31_RS23570 at 480.031 kb on - strand, within EX31_RS23570 at 480.031 kb on - strand, within EX31_RS23570 at 480.031 kb on - strand, within EX31_RS23570 at 480.060 kb on - strand, within EX31_RS23570 at 480.095 kb on + strand at 480.096 kb on - strand at 480.102 kb on + strand at 480.103 kb on - strand at 480.144 kb on + strand at 480.145 kb on - strand at 480.583 kb on + strand, within EX31_RS23575 at 480.655 kb on + strand, within EX31_RS23575 at 480.655 kb on + strand, within EX31_RS23575 at 480.691 kb on + strand, within EX31_RS23575 at 480.692 kb on - strand, within EX31_RS23575 at 480.692 kb on - strand, within EX31_RS23575 at 481.022 kb on - strand, within EX31_RS23575 at 481.022 kb on - strand, within EX31_RS23575 at 481.031 kb on + strand, within EX31_RS23575 at 481.032 kb on - strand, within EX31_RS23575 at 481.052 kb on - strand, within EX31_RS23575 at 481.052 kb on - strand, within EX31_RS23575 at 481.189 kb on - strand at 481.189 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 478,152 + EX31_RS23565 0.13 +0.9 478,153 - EX31_RS23565 0.13 +0.9 478,161 + EX31_RS23565 0.14 +0.9 478,162 - EX31_RS23565 0.14 +1.2 478,209 + EX31_RS23565 0.18 -0.7 478,210 - EX31_RS23565 0.18 -1.7 478,210 - EX31_RS23565 0.18 -1.2 478,210 - EX31_RS23565 0.18 +0.9 478,210 - EX31_RS23565 0.18 -0.1 478,234 + EX31_RS23565 0.21 +0.2 478,235 - EX31_RS23565 0.21 +0.6 478,235 - EX31_RS23565 0.21 +0.9 478,320 + EX31_RS23565 0.29 +2.5 478,321 - EX31_RS23565 0.29 +0.5 478,321 - EX31_RS23565 0.29 -1.3 478,321 - EX31_RS23565 0.29 +0.9 478,333 - EX31_RS23565 0.30 -0.3 478,333 - EX31_RS23565 0.30 +1.8 478,533 + EX31_RS23565 0.49 -0.1 478,533 + EX31_RS23565 0.49 +0.9 478,533 + EX31_RS23565 0.49 +1.7 478,534 - EX31_RS23565 0.49 +1.9 478,567 + EX31_RS23565 0.52 -2.1 478,620 + EX31_RS23565 0.57 -1.8 478,623 + EX31_RS23565 0.58 +2.5 478,624 - EX31_RS23565 0.58 -0.1 478,715 - EX31_RS23565 0.66 +0.5 478,715 - EX31_RS23565 0.66 +0.3 478,826 - EX31_RS23565 0.77 +0.5 478,837 - EX31_RS23565 0.78 -0.5 478,860 + EX31_RS23565 0.80 +0.2 478,878 + EX31_RS23565 0.82 -0.6 478,878 + EX31_RS23565 0.82 -1.4 478,878 + EX31_RS23565 0.82 -1.9 478,878 + EX31_RS23565 0.82 -1.0 478,879 - EX31_RS23565 0.82 +1.9 478,879 - EX31_RS23565 0.82 +0.1 478,879 - EX31_RS23565 0.82 +1.1 478,879 - EX31_RS23565 0.82 +1.6 479,061 - +0.7 479,061 - +0.1 479,061 - -2.8 479,061 - +0.4 479,065 + -1.1 479,065 + +1.9 479,066 - +1.6 479,066 - +0.7 479,066 - +1.3 479,066 - -0.7 479,096 + +0.9 479,096 + -0.1 479,096 + +1.3 479,097 - +0.7 479,130 - +0.9 479,130 - -0.5 479,165 - +1.9 479,268 + EX31_RS23570 0.18 +1.3 479,385 + EX31_RS23570 0.28 +0.4 479,541 - EX31_RS23570 0.42 -2.1 479,541 - EX31_RS23570 0.42 -0.1 479,679 + EX31_RS23570 0.54 -0.7 479,680 - EX31_RS23570 0.54 -2.1 479,680 - EX31_RS23570 0.54 +0.5 479,680 - EX31_RS23570 0.54 -1.3 479,680 - EX31_RS23570 0.54 -1.9 479,680 - EX31_RS23570 0.54 +1.9 479,692 - EX31_RS23570 0.55 -0.6 479,692 - EX31_RS23570 0.55 +0.9 479,692 - EX31_RS23570 0.55 +0.1 479,703 + EX31_RS23570 0.56 -0.7 479,704 - EX31_RS23570 0.56 -2.4 479,774 + EX31_RS23570 0.62 +2.9 479,775 - EX31_RS23570 0.62 +1.1 479,775 - EX31_RS23570 0.62 +0.1 479,775 - EX31_RS23570 0.62 -3.1 479,775 - EX31_RS23570 0.62 -0.3 479,775 - EX31_RS23570 0.62 +2.3 479,924 + EX31_RS23570 0.75 +0.9 479,924 + EX31_RS23570 0.75 +0.9 479,924 + EX31_RS23570 0.75 +0.3 479,924 + EX31_RS23570 0.75 -0.1 479,924 + EX31_RS23570 0.75 -1.9 479,924 + EX31_RS23570 0.75 +0.7 479,924 + EX31_RS23570 0.75 -0.5 479,924 + EX31_RS23570 0.75 +1.2 479,925 - EX31_RS23570 0.75 +1.4 479,925 - EX31_RS23570 0.75 +0.1 479,925 - EX31_RS23570 0.75 -1.1 479,925 - EX31_RS23570 0.75 +1.8 479,925 - EX31_RS23570 0.75 +1.9 479,925 - EX31_RS23570 0.75 -1.4 479,958 + EX31_RS23570 0.78 +0.9 479,959 - EX31_RS23570 0.78 +0.6 480,031 - EX31_RS23570 0.85 -1.9 480,031 - EX31_RS23570 0.85 +0.6 480,031 - EX31_RS23570 0.85 -0.7 480,060 - EX31_RS23570 0.87 +0.0 480,095 + +0.3 480,096 - -0.1 480,102 + +1.9 480,103 - +0.9 480,144 + +0.3 480,145 - +0.2 480,583 + EX31_RS23575 0.36 +0.0 480,655 + EX31_RS23575 0.43 -0.7 480,655 + EX31_RS23575 0.43 +1.1 480,691 + EX31_RS23575 0.46 -2.3 480,692 - EX31_RS23575 0.46 +1.4 480,692 - EX31_RS23575 0.46 +0.6 481,022 - EX31_RS23575 0.78 -0.7 481,022 - EX31_RS23575 0.78 -1.3 481,031 + EX31_RS23575 0.78 +0.9 481,032 - EX31_RS23575 0.79 -0.4 481,052 - EX31_RS23575 0.80 +1.3 481,052 - EX31_RS23575 0.80 +0.5 481,189 - +0.5 481,189 - +0.5
Or see this region's nucleotide sequence