Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS22970 and EX31_RS22975 are separated by 526 nucleotides EX31_RS22975 and EX31_RS22980 are separated by 48 nucleotides EX31_RS22980 and EX31_RS22985 are separated by 352 nucleotides
EX31_RS22970: EX31_RS22970 - hypothetical protein, at 356,920 to 357,249
_RS22970
EX31_RS22975: EX31_RS22975 - sugar porter family MFS transporter, at 357,776 to 359,191
_RS22975
EX31_RS22980: EX31_RS22980 - sugar O-acetyltransferase, at 359,240 to 359,794
_RS22980
EX31_RS22985: EX31_RS22985 - cupin domain-containing protein, at 360,147 to 360,542
_RS22985
Position (kb) 357
358
359
360 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 356.828 kb on + strand at 356.829 kb on - strand at 356.914 kb on + strand at 356.914 kb on + strand at 356.915 kb on - strand at 357.004 kb on + strand, within EX31_RS22970 at 357.004 kb on + strand, within EX31_RS22970 at 357.004 kb on + strand, within EX31_RS22970 at 357.005 kb on - strand, within EX31_RS22970 at 357.005 kb on - strand, within EX31_RS22970 at 357.005 kb on - strand, within EX31_RS22970 at 357.027 kb on - strand, within EX31_RS22970 at 357.027 kb on - strand, within EX31_RS22970 at 357.061 kb on + strand, within EX31_RS22970 at 357.062 kb on - strand, within EX31_RS22970 at 357.062 kb on - strand, within EX31_RS22970 at 357.062 kb on - strand, within EX31_RS22970 at 357.062 kb on - strand, within EX31_RS22970 at 357.062 kb on - strand, within EX31_RS22970 at 357.062 kb on - strand, within EX31_RS22970 at 357.062 kb on - strand, within EX31_RS22970 at 357.149 kb on + strand, within EX31_RS22970 at 357.252 kb on + strand at 357.263 kb on - strand at 357.263 kb on - strand at 357.263 kb on - strand at 357.270 kb on + strand at 357.270 kb on + strand at 357.270 kb on + strand at 357.271 kb on - strand at 357.271 kb on - strand at 357.271 kb on - strand at 357.271 kb on - strand at 357.326 kb on + strand at 357.339 kb on - strand at 357.339 kb on - strand at 357.339 kb on - strand at 357.383 kb on + strand at 357.384 kb on - strand at 357.384 kb on - strand at 357.384 kb on - strand at 357.384 kb on - strand at 357.384 kb on - strand at 357.384 kb on - strand at 357.412 kb on + strand at 357.412 kb on + strand at 357.413 kb on - strand at 357.413 kb on - strand at 357.416 kb on - strand at 357.430 kb on - strand at 357.433 kb on + strand at 357.433 kb on + strand at 357.433 kb on + strand at 357.433 kb on + strand at 357.433 kb on + strand at 357.433 kb on + strand at 357.433 kb on + strand at 357.433 kb on + strand at 357.433 kb on + strand at 357.433 kb on + strand at 357.433 kb on + strand at 357.433 kb on + strand at 357.433 kb on + strand at 357.434 kb on - strand at 357.434 kb on - strand at 357.434 kb on - strand at 357.434 kb on - strand at 357.434 kb on - strand at 357.434 kb on - strand at 357.434 kb on - strand at 357.434 kb on - strand at 357.434 kb on - strand at 357.434 kb on - strand at 357.434 kb on - strand at 357.450 kb on + strand at 357.489 kb on - strand at 357.489 kb on - strand at 357.489 kb on - strand at 357.557 kb on + strand at 357.588 kb on + strand at 357.588 kb on + strand at 357.665 kb on + strand at 357.665 kb on + strand at 357.665 kb on + strand at 357.666 kb on - strand at 357.666 kb on - strand at 357.666 kb on - strand at 357.666 kb on - strand at 357.666 kb on - strand at 357.666 kb on - strand at 357.667 kb on + strand at 357.667 kb on + strand at 357.667 kb on + strand at 357.667 kb on + strand at 357.667 kb on + strand at 357.667 kb on + strand at 357.667 kb on + strand at 357.667 kb on + strand at 357.667 kb on + strand at 357.667 kb on + strand at 357.667 kb on + strand at 357.667 kb on + strand at 357.667 kb on + strand at 357.667 kb on + strand at 357.667 kb on + strand at 357.667 kb on + strand at 357.668 kb on - strand at 357.668 kb on - strand at 357.668 kb on - strand at 357.668 kb on - strand at 357.668 kb on - strand at 357.668 kb on - strand at 357.668 kb on - strand at 357.668 kb on - strand at 357.668 kb on - strand at 357.668 kb on - strand at 357.668 kb on - strand at 357.668 kb on - strand at 357.668 kb on - strand at 357.668 kb on - strand at 357.669 kb on + strand at 357.669 kb on + strand at 357.669 kb on + strand at 357.669 kb on + strand at 357.669 kb on + strand at 357.669 kb on + strand at 357.669 kb on + strand at 357.669 kb on + strand at 357.669 kb on + strand at 357.669 kb on + strand at 357.669 kb on + strand at 357.669 kb on + strand at 357.669 kb on + strand at 357.669 kb on + strand at 357.669 kb on + strand at 357.669 kb on + strand at 357.669 kb on + strand at 357.669 kb on + strand at 357.669 kb on + strand at 357.670 kb on - strand at 357.670 kb on - strand at 357.670 kb on - strand at 357.670 kb on - strand at 357.670 kb on - strand at 357.670 kb on - strand at 357.670 kb on - strand at 357.670 kb on - strand at 357.670 kb on - strand at 357.670 kb on - strand at 357.670 kb on - strand at 357.670 kb on - strand at 357.670 kb on - strand at 357.670 kb on - strand at 357.670 kb on - strand at 357.670 kb on - strand at 357.670 kb on - strand at 357.670 kb on - strand at 357.670 kb on - strand at 357.670 kb on - strand at 357.670 kb on - strand at 357.670 kb on - strand at 357.670 kb on - strand at 357.670 kb on - strand at 357.670 kb on - strand at 357.670 kb on - strand at 357.711 kb on - strand at 357.752 kb on + strand at 357.752 kb on + strand at 357.753 kb on - strand at 357.796 kb on + strand at 357.919 kb on + strand, within EX31_RS22975 at 357.919 kb on + strand, within EX31_RS22975 at 357.922 kb on + strand, within EX31_RS22975 at 357.922 kb on + strand, within EX31_RS22975 at 357.922 kb on + strand, within EX31_RS22975 at 358.069 kb on + strand, within EX31_RS22975 at 358.069 kb on + strand, within EX31_RS22975 at 358.070 kb on - strand, within EX31_RS22975 at 358.070 kb on - strand, within EX31_RS22975 at 358.070 kb on - strand, within EX31_RS22975 at 358.179 kb on - strand, within EX31_RS22975 at 358.179 kb on - strand, within EX31_RS22975 at 358.229 kb on + strand, within EX31_RS22975 at 358.229 kb on + strand, within EX31_RS22975 at 358.230 kb on - strand, within EX31_RS22975 at 358.230 kb on - strand, within EX31_RS22975 at 358.230 kb on - strand, within EX31_RS22975 at 358.405 kb on + strand, within EX31_RS22975 at 358.405 kb on + strand, within EX31_RS22975 at 358.406 kb on - strand, within EX31_RS22975 at 358.406 kb on - strand, within EX31_RS22975 at 358.406 kb on - strand, within EX31_RS22975 at 358.406 kb on - strand, within EX31_RS22975 at 358.406 kb on - strand, within EX31_RS22975 at 358.406 kb on - strand, within EX31_RS22975 at 358.406 kb on - strand, within EX31_RS22975 at 358.531 kb on + strand, within EX31_RS22975 at 358.532 kb on - strand, within EX31_RS22975 at 358.532 kb on - strand, within EX31_RS22975 at 358.554 kb on + strand, within EX31_RS22975 at 358.597 kb on + strand, within EX31_RS22975 at 358.607 kb on + strand, within EX31_RS22975 at 358.607 kb on + strand, within EX31_RS22975 at 358.607 kb on + strand, within EX31_RS22975 at 358.607 kb on + strand, within EX31_RS22975 at 358.607 kb on + strand, within EX31_RS22975 at 358.607 kb on + strand, within EX31_RS22975 at 358.607 kb on + strand, within EX31_RS22975 at 358.607 kb on + strand, within EX31_RS22975 at 358.607 kb on + strand, within EX31_RS22975 at 358.607 kb on + strand, within EX31_RS22975 at 358.607 kb on + strand, within EX31_RS22975 at 358.608 kb on - strand, within EX31_RS22975 at 358.608 kb on - strand, within EX31_RS22975 at 358.608 kb on - strand, within EX31_RS22975 at 358.610 kb on + strand, within EX31_RS22975 at 358.642 kb on + strand, within EX31_RS22975 at 358.643 kb on - strand, within EX31_RS22975 at 358.648 kb on + strand, within EX31_RS22975 at 358.649 kb on - strand, within EX31_RS22975 at 358.675 kb on + strand, within EX31_RS22975 at 358.675 kb on + strand, within EX31_RS22975 at 358.675 kb on + strand, within EX31_RS22975 at 358.708 kb on + strand, within EX31_RS22975 at 358.730 kb on - strand, within EX31_RS22975 at 358.799 kb on + strand, within EX31_RS22975 at 358.876 kb on + strand, within EX31_RS22975 at 358.876 kb on + strand, within EX31_RS22975 at 358.876 kb on + strand, within EX31_RS22975 at 358.876 kb on + strand, within EX31_RS22975 at 358.877 kb on - strand, within EX31_RS22975 at 358.911 kb on + strand, within EX31_RS22975 at 359.011 kb on + strand, within EX31_RS22975 at 359.035 kb on + strand, within EX31_RS22975 at 359.064 kb on - strand at 359.142 kb on + strand at 359.155 kb on + strand at 359.155 kb on + strand at 359.155 kb on + strand at 359.155 kb on + strand at 359.156 kb on - strand at 359.156 kb on - strand at 359.156 kb on - strand at 359.156 kb on - strand at 359.224 kb on + strand at 359.238 kb on + strand at 359.281 kb on + strand at 359.282 kb on - strand at 359.282 kb on - strand at 359.282 kb on - strand at 359.284 kb on + strand at 359.284 kb on + strand at 359.284 kb on + strand at 359.285 kb on - strand at 359.285 kb on - strand at 359.285 kb on - strand at 359.285 kb on - strand at 359.285 kb on - strand at 359.299 kb on - strand, within EX31_RS22980 at 359.342 kb on - strand, within EX31_RS22980 at 359.394 kb on + strand, within EX31_RS22980 at 359.395 kb on - strand, within EX31_RS22980 at 359.454 kb on + strand, within EX31_RS22980 at 359.454 kb on + strand, within EX31_RS22980 at 359.454 kb on + strand, within EX31_RS22980 at 359.526 kb on + strand, within EX31_RS22980 at 359.596 kb on - strand, within EX31_RS22980 at 359.608 kb on + strand, within EX31_RS22980 at 359.632 kb on + strand, within EX31_RS22980 at 359.633 kb on - strand, within EX31_RS22980 at 359.792 kb on + strand at 359.792 kb on + strand at 359.792 kb on + strand at 359.792 kb on + strand at 359.792 kb on + strand at 359.792 kb on + strand at 359.793 kb on - strand at 359.793 kb on - strand at 359.793 kb on - strand at 359.793 kb on - strand at 359.793 kb on - strand at 359.865 kb on + strand at 359.866 kb on - strand at 359.866 kb on - strand at 359.866 kb on - strand at 359.982 kb on + strand at 359.989 kb on - strand at 359.990 kb on + strand at 359.990 kb on + strand at 360.033 kb on + strand at 360.033 kb on + strand at 360.034 kb on - strand at 360.046 kb on - strand at 360.046 kb on - strand at 360.080 kb on + strand at 360.080 kb on + strand at 360.087 kb on + strand at 360.088 kb on - strand at 360.088 kb on - strand at 360.144 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 356,828 + +0.5 356,829 - -1.6 356,914 + +0.4 356,914 + +2.5 356,915 - -1.0 357,004 + EX31_RS22970 0.25 +2.1 357,004 + EX31_RS22970 0.25 +0.4 357,004 + EX31_RS22970 0.25 -0.3 357,005 - EX31_RS22970 0.26 -2.5 357,005 - EX31_RS22970 0.26 +2.5 357,005 - EX31_RS22970 0.26 -1.8 357,027 - EX31_RS22970 0.32 +2.4 357,027 - EX31_RS22970 0.32 -1.2 357,061 + EX31_RS22970 0.43 +1.0 357,062 - EX31_RS22970 0.43 -1.5 357,062 - EX31_RS22970 0.43 -0.9 357,062 - EX31_RS22970 0.43 -0.6 357,062 - EX31_RS22970 0.43 -2.0 357,062 - EX31_RS22970 0.43 -0.0 357,062 - EX31_RS22970 0.43 +0.7 357,062 - EX31_RS22970 0.43 -1.3 357,149 + EX31_RS22970 0.69 -0.8 357,252 + +3.5 357,263 - -1.5 357,263 - +0.9 357,263 - -1.2 357,270 + -1.2 357,270 + -1.6 357,270 + -1.8 357,271 - +1.0 357,271 - +0.6 357,271 - +1.3 357,271 - +0.5 357,326 + +0.5 357,339 - +0.5 357,339 - +1.1 357,339 - -0.5 357,383 + -1.5 357,384 - -1.0 357,384 - +1.1 357,384 - -0.6 357,384 - -0.0 357,384 - -1.0 357,384 - +0.4 357,412 + -0.4 357,412 + +1.1 357,413 - +1.5 357,413 - -0.7 357,416 - +2.0 357,430 - -1.2 357,433 + +1.3 357,433 + -1.4 357,433 + -1.6 357,433 + +1.7 357,433 + -0.5 357,433 + -1.0 357,433 + +1.3 357,433 + -0.6 357,433 + -1.0 357,433 + -0.6 357,433 + +1.5 357,433 + -1.4 357,433 + +1.2 357,434 - +2.0 357,434 - +0.6 357,434 - +1.0 357,434 - -0.4 357,434 - +1.0 357,434 - -0.9 357,434 - -1.4 357,434 - -0.6 357,434 - +1.0 357,434 - -0.4 357,434 - -0.5 357,450 + +1.0 357,489 - -0.5 357,489 - +0.4 357,489 - -1.8 357,557 + +0.6 357,588 + +1.0 357,588 + +1.5 357,665 + +2.0 357,665 + -0.1 357,665 + -0.4 357,666 - -0.0 357,666 - -0.3 357,666 - -1.4 357,666 - +0.5 357,666 - +2.0 357,666 - -0.3 357,667 + -0.0 357,667 + +1.0 357,667 + -1.2 357,667 + -0.3 357,667 + +3.3 357,667 + +0.4 357,667 + +1.0 357,667 + +1.0 357,667 + -0.6 357,667 + -1.8 357,667 + -0.4 357,667 + +0.3 357,667 + +0.5 357,667 + +1.0 357,667 + +0.5 357,667 + -0.0 357,668 - -1.4 357,668 - +1.2 357,668 - +2.2 357,668 - +1.0 357,668 - +1.0 357,668 - -0.0 357,668 - -1.5 357,668 - +1.3 357,668 - +1.3 357,668 - -0.0 357,668 - -0.0 357,668 - -2.5 357,668 - -0.3 357,668 - -0.8 357,669 + -1.8 357,669 + -0.1 357,669 + +1.1 357,669 + -0.0 357,669 + +0.8 357,669 + +1.7 357,669 + +0.1 357,669 + -1.6 357,669 + +0.2 357,669 + -0.0 357,669 + -1.4 357,669 + -0.9 357,669 + -0.0 357,669 + +1.5 357,669 + +0.4 357,669 + -0.6 357,669 + -0.6 357,669 + +2.0 357,669 + -1.8 357,670 - -2.8 357,670 - +1.0 357,670 - -0.0 357,670 - -0.0 357,670 - -0.0 357,670 - -0.0 357,670 - -0.2 357,670 - +1.7 357,670 - +0.1 357,670 - +0.5 357,670 - +0.7 357,670 - -0.0 357,670 - -1.6 357,670 - +0.8 357,670 - +1.0 357,670 - -1.4 357,670 - -1.0 357,670 - +1.4 357,670 - -0.4 357,670 - +0.1 357,670 - -0.0 357,670 - -0.6 357,670 - -0.9 357,670 - +0.3 357,670 - -0.4 357,670 - +2.2 357,711 - -1.4 357,752 + +0.5 357,752 + +1.5 357,753 - +0.8 357,796 + -3.4 357,919 + EX31_RS22975 0.10 -0.6 357,919 + EX31_RS22975 0.10 +1.2 357,922 + EX31_RS22975 0.10 -3.1 357,922 + EX31_RS22975 0.10 -1.6 357,922 + EX31_RS22975 0.10 +0.5 358,069 + EX31_RS22975 0.21 +1.4 358,069 + EX31_RS22975 0.21 +1.7 358,070 - EX31_RS22975 0.21 -2.4 358,070 - EX31_RS22975 0.21 +1.0 358,070 - EX31_RS22975 0.21 -0.0 358,179 - EX31_RS22975 0.28 +1.0 358,179 - EX31_RS22975 0.28 +0.6 358,229 + EX31_RS22975 0.32 +0.2 358,229 + EX31_RS22975 0.32 -0.4 358,230 - EX31_RS22975 0.32 -0.3 358,230 - EX31_RS22975 0.32 -0.6 358,230 - EX31_RS22975 0.32 +3.3 358,405 + EX31_RS22975 0.44 -0.6 358,405 + EX31_RS22975 0.44 -2.0 358,406 - EX31_RS22975 0.44 +0.6 358,406 - EX31_RS22975 0.44 -0.0 358,406 - EX31_RS22975 0.44 -0.3 358,406 - EX31_RS22975 0.44 -1.8 358,406 - EX31_RS22975 0.44 +1.2 358,406 - EX31_RS22975 0.44 +2.5 358,406 - EX31_RS22975 0.44 -1.0 358,531 + EX31_RS22975 0.53 +1.3 358,532 - EX31_RS22975 0.53 -2.5 358,532 - EX31_RS22975 0.53 -1.1 358,554 + EX31_RS22975 0.55 +1.1 358,597 + EX31_RS22975 0.58 -0.0 358,607 + EX31_RS22975 0.59 -0.0 358,607 + EX31_RS22975 0.59 +1.5 358,607 + EX31_RS22975 0.59 -0.0 358,607 + EX31_RS22975 0.59 +1.8 358,607 + EX31_RS22975 0.59 -0.2 358,607 + EX31_RS22975 0.59 +0.6 358,607 + EX31_RS22975 0.59 -0.6 358,607 + EX31_RS22975 0.59 +1.0 358,607 + EX31_RS22975 0.59 -0.5 358,607 + EX31_RS22975 0.59 +2.3 358,607 + EX31_RS22975 0.59 -0.4 358,608 - EX31_RS22975 0.59 -0.6 358,608 - EX31_RS22975 0.59 -0.4 358,608 - EX31_RS22975 0.59 +0.2 358,610 + EX31_RS22975 0.59 -1.0 358,642 + EX31_RS22975 0.61 -0.6 358,643 - EX31_RS22975 0.61 -0.7 358,648 + EX31_RS22975 0.62 -0.0 358,649 - EX31_RS22975 0.62 +2.0 358,675 + EX31_RS22975 0.63 +1.0 358,675 + EX31_RS22975 0.63 +1.4 358,675 + EX31_RS22975 0.63 -2.9 358,708 + EX31_RS22975 0.66 +0.2 358,730 - EX31_RS22975 0.67 -2.5 358,799 + EX31_RS22975 0.72 -0.2 358,876 + EX31_RS22975 0.78 -0.6 358,876 + EX31_RS22975 0.78 +1.0 358,876 + EX31_RS22975 0.78 +1.5 358,876 + EX31_RS22975 0.78 +0.5 358,877 - EX31_RS22975 0.78 -0.5 358,911 + EX31_RS22975 0.80 +0.5 359,011 + EX31_RS22975 0.87 +0.2 359,035 + EX31_RS22975 0.89 -1.6 359,064 - -2.0 359,142 + -0.2 359,155 + +1.0 359,155 + -0.2 359,155 + -1.6 359,155 + -0.0 359,156 - -0.0 359,156 - +0.7 359,156 - +0.4 359,156 - +0.1 359,224 + -0.0 359,238 + +0.2 359,281 + -1.4 359,282 - -1.4 359,282 - +2.3 359,282 - +0.5 359,284 + +1.1 359,284 + +1.9 359,284 + -0.4 359,285 - +1.1 359,285 - -0.6 359,285 - -2.7 359,285 - -0.6 359,285 - -0.3 359,299 - EX31_RS22980 0.11 -3.1 359,342 - EX31_RS22980 0.18 +1.7 359,394 + EX31_RS22980 0.28 +1.0 359,395 - EX31_RS22980 0.28 +0.1 359,454 + EX31_RS22980 0.39 -1.0 359,454 + EX31_RS22980 0.39 -0.7 359,454 + EX31_RS22980 0.39 +3.5 359,526 + EX31_RS22980 0.52 +1.7 359,596 - EX31_RS22980 0.64 +1.0 359,608 + EX31_RS22980 0.66 -0.4 359,632 + EX31_RS22980 0.71 -1.6 359,633 - EX31_RS22980 0.71 +1.0 359,792 + +1.1 359,792 + +0.7 359,792 + -1.1 359,792 + +0.6 359,792 + -2.2 359,792 + +0.1 359,793 - +0.2 359,793 - -2.8 359,793 - -0.8 359,793 - -2.2 359,793 - -1.4 359,865 + -0.4 359,866 - -0.9 359,866 - +2.3 359,866 - +0.2 359,982 + +0.5 359,989 - -0.0 359,990 + -0.4 359,990 + -0.0 360,033 + -0.6 360,033 + -0.2 360,034 - +1.2 360,046 - +0.8 360,046 - +0.7 360,080 + +1.2 360,080 + +1.6 360,087 + -1.8 360,088 - -2.2 360,088 - +1.4 360,144 - -2.7
Or see this region's nucleotide sequence