Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS22140 and EX31_RS22145 are separated by 62 nucleotides EX31_RS22145 and EX31_RS22150 are separated by 69 nucleotides
EX31_RS22140: EX31_RS22140 - thiamine-phosphate kinase, at 175,909 to 176,895
_RS22140
EX31_RS22145: EX31_RS22145 - phosphatidylglycerophosphatase A, at 176,958 to 177,452
_RS22145
EX31_RS22150: EX31_RS22150 - aldo/keto reductase, at 177,522 to 178,496
_RS22150
Position (kb) 176
177
178 Strain fitness (log2 ratio) -2
-1
0
1
2 at 176.906 kb on + strand at 177.031 kb on + strand, within EX31_RS22145 at 177.096 kb on + strand, within EX31_RS22145 at 177.096 kb on + strand, within EX31_RS22145 at 177.137 kb on + strand, within EX31_RS22145 at 177.208 kb on + strand, within EX31_RS22145 at 177.414 kb on + strand at 177.464 kb on + strand at 177.465 kb on - strand at 177.467 kb on + strand at 177.467 kb on + strand at 177.468 kb on - strand at 177.470 kb on + strand at 177.470 kb on + strand at 177.518 kb on + strand at 177.519 kb on - strand at 177.520 kb on + strand at 177.520 kb on + strand at 177.521 kb on - strand at 177.553 kb on + strand at 177.553 kb on + strand at 177.553 kb on + strand at 177.554 kb on - strand at 177.554 kb on - strand at 177.554 kb on - strand at 177.554 kb on - strand at 177.554 kb on - strand at 177.554 kb on - strand at 177.778 kb on + strand, within EX31_RS22150 at 177.779 kb on - strand, within EX31_RS22150 at 177.779 kb on - strand, within EX31_RS22150 at 177.814 kb on - strand, within EX31_RS22150 at 177.814 kb on - strand, within EX31_RS22150 at 177.814 kb on - strand, within EX31_RS22150 at 177.873 kb on + strand, within EX31_RS22150 at 177.874 kb on - strand, within EX31_RS22150 at 177.904 kb on + strand, within EX31_RS22150 at 177.904 kb on + strand, within EX31_RS22150 at 177.905 kb on - strand, within EX31_RS22150 at 177.940 kb on + strand, within EX31_RS22150 at 177.941 kb on - strand, within EX31_RS22150 at 177.941 kb on - strand, within EX31_RS22150 at 177.941 kb on - strand, within EX31_RS22150 at 178.038 kb on - strand, within EX31_RS22150 at 178.139 kb on - strand, within EX31_RS22150 at 178.139 kb on - strand, within EX31_RS22150 at 178.139 kb on - strand, within EX31_RS22150 at 178.139 kb on - strand, within EX31_RS22150 at 178.139 kb on - strand, within EX31_RS22150 at 178.229 kb on - strand, within EX31_RS22150 at 178.316 kb on - strand, within EX31_RS22150 at 178.316 kb on - strand, within EX31_RS22150 at 178.340 kb on + strand, within EX31_RS22150 at 178.341 kb on - strand, within EX31_RS22150 at 178.341 kb on - strand, within EX31_RS22150 at 178.437 kb on - strand at 178.437 kb on - strand at 178.437 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 176,906 + -0.0 177,031 + EX31_RS22145 0.15 +0.3 177,096 + EX31_RS22145 0.28 -2.2 177,096 + EX31_RS22145 0.28 -1.8 177,137 + EX31_RS22145 0.36 -1.0 177,208 + EX31_RS22145 0.51 +1.0 177,414 + -2.1 177,464 + +0.3 177,465 - +1.1 177,467 + +0.4 177,467 + +1.0 177,468 - -1.0 177,470 + -1.2 177,470 + +0.8 177,518 + +1.0 177,519 - -1.7 177,520 + -1.8 177,520 + -0.3 177,521 - -1.1 177,553 + +2.0 177,553 + +1.2 177,553 + -2.3 177,554 - -1.6 177,554 - +0.9 177,554 - -0.3 177,554 - +2.0 177,554 - +1.1 177,554 - -1.0 177,778 + EX31_RS22150 0.26 +0.7 177,779 - EX31_RS22150 0.26 -0.5 177,779 - EX31_RS22150 0.26 -0.3 177,814 - EX31_RS22150 0.30 +2.0 177,814 - EX31_RS22150 0.30 +1.3 177,814 - EX31_RS22150 0.30 -0.0 177,873 + EX31_RS22150 0.36 +2.0 177,874 - EX31_RS22150 0.36 -0.3 177,904 + EX31_RS22150 0.39 +1.0 177,904 + EX31_RS22150 0.39 +1.4 177,905 - EX31_RS22150 0.39 +0.4 177,940 + EX31_RS22150 0.43 +1.0 177,941 - EX31_RS22150 0.43 +2.3 177,941 - EX31_RS22150 0.43 -0.0 177,941 - EX31_RS22150 0.43 +2.6 178,038 - EX31_RS22150 0.53 -0.1 178,139 - EX31_RS22150 0.63 +1.0 178,139 - EX31_RS22150 0.63 -2.5 178,139 - EX31_RS22150 0.63 +0.2 178,139 - EX31_RS22150 0.63 -1.6 178,139 - EX31_RS22150 0.63 +1.0 178,229 - EX31_RS22150 0.73 -0.3 178,316 - EX31_RS22150 0.81 -0.9 178,316 - EX31_RS22150 0.81 +0.8 178,340 + EX31_RS22150 0.84 -1.0 178,341 - EX31_RS22150 0.84 +1.5 178,341 - EX31_RS22150 0.84 -1.0 178,437 - -2.5 178,437 - +1.0 178,437 - +0.4
Or see this region's nucleotide sequence