Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS20765 and EX31_RS20770 are separated by 51 nucleotides EX31_RS20770 and EX31_RS20775 are separated by 32 nucleotides
EX31_RS20765: EX31_RS20765 - ABC transporter permease, at 800,154 to 801,125
_RS20765
EX31_RS20770: EX31_RS20770 - sugar ABC transporter ATP-binding protein, at 801,177 to 802,670
_RS20770
EX31_RS20775: EX31_RS20775 - substrate-binding domain-containing protein, at 802,703 to 803,746
_RS20775
Position (kb) 801
802
803 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 800.191 kb on - strand at 800.196 kb on - strand at 800.198 kb on + strand at 800.199 kb on - strand at 800.199 kb on - strand at 800.202 kb on - strand at 800.354 kb on + strand, within EX31_RS20765 at 800.354 kb on + strand, within EX31_RS20765 at 800.355 kb on - strand, within EX31_RS20765 at 800.370 kb on + strand, within EX31_RS20765 at 800.531 kb on + strand, within EX31_RS20765 at 800.531 kb on + strand, within EX31_RS20765 at 800.531 kb on + strand, within EX31_RS20765 at 800.531 kb on + strand, within EX31_RS20765 at 800.531 kb on + strand, within EX31_RS20765 at 800.531 kb on + strand, within EX31_RS20765 at 800.532 kb on - strand, within EX31_RS20765 at 800.532 kb on - strand, within EX31_RS20765 at 800.532 kb on - strand, within EX31_RS20765 at 800.532 kb on - strand, within EX31_RS20765 at 800.532 kb on - strand, within EX31_RS20765 at 800.532 kb on - strand, within EX31_RS20765 at 800.533 kb on + strand, within EX31_RS20765 at 800.533 kb on + strand, within EX31_RS20765 at 800.533 kb on + strand, within EX31_RS20765 at 800.533 kb on + strand, within EX31_RS20765 at 800.588 kb on + strand, within EX31_RS20765 at 800.631 kb on - strand, within EX31_RS20765 at 800.672 kb on + strand, within EX31_RS20765 at 800.812 kb on - strand, within EX31_RS20765 at 800.912 kb on + strand, within EX31_RS20765 at 800.912 kb on + strand, within EX31_RS20765 at 800.939 kb on + strand, within EX31_RS20765 at 800.940 kb on - strand, within EX31_RS20765 at 800.964 kb on + strand, within EX31_RS20765 at 800.967 kb on + strand, within EX31_RS20765 at 800.967 kb on + strand, within EX31_RS20765 at 800.967 kb on + strand, within EX31_RS20765 at 800.967 kb on + strand, within EX31_RS20765 at 800.967 kb on + strand, within EX31_RS20765 at 800.968 kb on - strand, within EX31_RS20765 at 800.969 kb on + strand, within EX31_RS20765 at 800.969 kb on + strand, within EX31_RS20765 at 800.970 kb on - strand, within EX31_RS20765 at 800.970 kb on - strand, within EX31_RS20765 at 800.970 kb on - strand, within EX31_RS20765 at 800.970 kb on - strand, within EX31_RS20765 at 800.970 kb on - strand, within EX31_RS20765 at 801.029 kb on + strand at 801.030 kb on - strand at 801.064 kb on - strand at 801.064 kb on - strand at 801.064 kb on - strand at 801.074 kb on + strand at 801.075 kb on - strand at 801.079 kb on - strand at 801.092 kb on + strand at 801.092 kb on + strand at 801.111 kb on - strand at 801.125 kb on + strand at 801.125 kb on + strand at 801.125 kb on + strand at 801.129 kb on - strand at 801.129 kb on - strand at 801.147 kb on + strand at 801.148 kb on - strand at 801.148 kb on - strand at 801.148 kb on - strand at 801.163 kb on - strand at 801.221 kb on + strand at 801.287 kb on + strand at 801.288 kb on - strand at 801.288 kb on - strand at 801.288 kb on - strand at 801.294 kb on + strand at 801.295 kb on - strand at 801.362 kb on + strand, within EX31_RS20770 at 801.363 kb on - strand, within EX31_RS20770 at 801.365 kb on - strand, within EX31_RS20770 at 801.387 kb on - strand, within EX31_RS20770 at 801.425 kb on + strand, within EX31_RS20770 at 801.425 kb on + strand, within EX31_RS20770 at 801.425 kb on + strand, within EX31_RS20770 at 801.426 kb on - strand, within EX31_RS20770 at 801.501 kb on + strand, within EX31_RS20770 at 801.502 kb on - strand, within EX31_RS20770 at 801.506 kb on + strand, within EX31_RS20770 at 801.506 kb on + strand, within EX31_RS20770 at 801.507 kb on - strand, within EX31_RS20770 at 801.507 kb on - strand, within EX31_RS20770 at 801.507 kb on - strand, within EX31_RS20770 at 801.551 kb on + strand, within EX31_RS20770 at 801.552 kb on - strand, within EX31_RS20770 at 801.587 kb on + strand, within EX31_RS20770 at 801.614 kb on + strand, within EX31_RS20770 at 801.638 kb on + strand, within EX31_RS20770 at 801.639 kb on - strand, within EX31_RS20770 at 801.791 kb on + strand, within EX31_RS20770 at 801.916 kb on + strand, within EX31_RS20770 at 801.968 kb on + strand, within EX31_RS20770 at 801.968 kb on + strand, within EX31_RS20770 at 801.968 kb on + strand, within EX31_RS20770 at 801.968 kb on + strand, within EX31_RS20770 at 801.968 kb on + strand, within EX31_RS20770 at 801.969 kb on - strand, within EX31_RS20770 at 801.969 kb on - strand, within EX31_RS20770 at 801.969 kb on - strand, within EX31_RS20770 at 801.969 kb on - strand, within EX31_RS20770 at 801.969 kb on - strand, within EX31_RS20770 at 801.992 kb on + strand, within EX31_RS20770 at 801.992 kb on + strand, within EX31_RS20770 at 802.014 kb on - strand, within EX31_RS20770 at 802.023 kb on + strand, within EX31_RS20770 at 802.023 kb on + strand, within EX31_RS20770 at 802.023 kb on + strand, within EX31_RS20770 at 802.023 kb on + strand, within EX31_RS20770 at 802.023 kb on + strand, within EX31_RS20770 at 802.023 kb on + strand, within EX31_RS20770 at 802.023 kb on + strand, within EX31_RS20770 at 802.023 kb on + strand, within EX31_RS20770 at 802.024 kb on - strand, within EX31_RS20770 at 802.024 kb on - strand, within EX31_RS20770 at 802.024 kb on - strand, within EX31_RS20770 at 802.024 kb on - strand, within EX31_RS20770 at 802.024 kb on - strand, within EX31_RS20770 at 802.024 kb on - strand, within EX31_RS20770 at 802.078 kb on + strand, within EX31_RS20770 at 802.078 kb on + strand, within EX31_RS20770 at 802.078 kb on + strand, within EX31_RS20770 at 802.078 kb on + strand, within EX31_RS20770 at 802.078 kb on + strand, within EX31_RS20770 at 802.078 kb on + strand, within EX31_RS20770 at 802.078 kb on + strand, within EX31_RS20770 at 802.078 kb on + strand, within EX31_RS20770 at 802.078 kb on + strand, within EX31_RS20770 at 802.078 kb on + strand, within EX31_RS20770 at 802.078 kb on + strand, within EX31_RS20770 at 802.079 kb on - strand, within EX31_RS20770 at 802.079 kb on - strand, within EX31_RS20770 at 802.234 kb on - strand, within EX31_RS20770 at 802.234 kb on - strand, within EX31_RS20770 at 802.268 kb on + strand, within EX31_RS20770 at 802.269 kb on - strand, within EX31_RS20770 at 802.269 kb on - strand, within EX31_RS20770 at 802.269 kb on - strand, within EX31_RS20770 at 802.269 kb on - strand, within EX31_RS20770 at 802.309 kb on + strand, within EX31_RS20770 at 802.309 kb on + strand, within EX31_RS20770 at 802.310 kb on - strand, within EX31_RS20770 at 802.370 kb on + strand, within EX31_RS20770 at 802.371 kb on - strand, within EX31_RS20770 at 802.371 kb on - strand, within EX31_RS20770 at 802.371 kb on - strand, within EX31_RS20770 at 802.627 kb on + strand at 802.627 kb on + strand at 802.704 kb on + strand at 802.705 kb on - strand at 802.705 kb on - strand at 802.705 kb on - strand at 802.835 kb on + strand, within EX31_RS20775 at 802.835 kb on + strand, within EX31_RS20775 at 802.836 kb on - strand, within EX31_RS20775 at 802.836 kb on - strand, within EX31_RS20775 at 802.864 kb on + strand, within EX31_RS20775 at 802.864 kb on + strand, within EX31_RS20775 at 802.864 kb on + strand, within EX31_RS20775 at 802.865 kb on - strand, within EX31_RS20775 at 802.920 kb on + strand, within EX31_RS20775 at 802.920 kb on + strand, within EX31_RS20775 at 802.921 kb on - strand, within EX31_RS20775 at 802.921 kb on - strand, within EX31_RS20775 at 802.933 kb on + strand, within EX31_RS20775 at 802.950 kb on - strand, within EX31_RS20775 at 803.181 kb on + strand, within EX31_RS20775 at 803.181 kb on + strand, within EX31_RS20775 at 803.181 kb on + strand, within EX31_RS20775 at 803.181 kb on + strand, within EX31_RS20775 at 803.181 kb on + strand, within EX31_RS20775 at 803.182 kb on - strand, within EX31_RS20775 at 803.182 kb on - strand, within EX31_RS20775 at 803.182 kb on - strand, within EX31_RS20775 at 803.182 kb on - strand, within EX31_RS20775 at 803.182 kb on - strand, within EX31_RS20775 at 803.182 kb on - strand, within EX31_RS20775 at 803.182 kb on - strand, within EX31_RS20775 at 803.182 kb on - strand, within EX31_RS20775 at 803.259 kb on - strand, within EX31_RS20775 at 803.259 kb on - strand, within EX31_RS20775 at 803.276 kb on + strand, within EX31_RS20775 at 803.289 kb on + strand, within EX31_RS20775 at 803.289 kb on + strand, within EX31_RS20775 at 803.290 kb on - strand, within EX31_RS20775 at 803.290 kb on - strand, within EX31_RS20775 at 803.290 kb on - strand, within EX31_RS20775 at 803.484 kb on + strand, within EX31_RS20775 at 803.507 kb on - strand, within EX31_RS20775 at 803.507 kb on - strand, within EX31_RS20775 at 803.521 kb on + strand, within EX31_RS20775 at 803.521 kb on + strand, within EX31_RS20775 at 803.521 kb on + strand, within EX31_RS20775 at 803.521 kb on + strand, within EX31_RS20775 at 803.521 kb on + strand, within EX31_RS20775 at 803.521 kb on + strand, within EX31_RS20775 at 803.521 kb on + strand, within EX31_RS20775 at 803.521 kb on + strand, within EX31_RS20775 at 803.522 kb on - strand, within EX31_RS20775 at 803.522 kb on - strand, within EX31_RS20775 at 803.522 kb on - strand, within EX31_RS20775 at 803.522 kb on - strand, within EX31_RS20775 at 803.522 kb on - strand, within EX31_RS20775 at 803.522 kb on - strand, within EX31_RS20775 at 803.522 kb on - strand, within EX31_RS20775 at 803.523 kb on + strand, within EX31_RS20775 at 803.523 kb on + strand, within EX31_RS20775 at 803.523 kb on + strand, within EX31_RS20775 at 803.523 kb on + strand, within EX31_RS20775 at 803.523 kb on + strand, within EX31_RS20775 at 803.523 kb on + strand, within EX31_RS20775 at 803.523 kb on + strand, within EX31_RS20775 at 803.524 kb on - strand, within EX31_RS20775 at 803.524 kb on - strand, within EX31_RS20775 at 803.616 kb on + strand, within EX31_RS20775 at 803.616 kb on + strand, within EX31_RS20775 at 803.617 kb on - strand, within EX31_RS20775
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 800,191 - +0.1 800,196 - -2.0 800,198 + -1.5 800,199 - -1.7 800,199 - -0.0 800,202 - -0.6 800,354 + EX31_RS20765 0.21 +0.6 800,354 + EX31_RS20765 0.21 -1.4 800,355 - EX31_RS20765 0.21 +1.7 800,370 + EX31_RS20765 0.22 +1.1 800,531 + EX31_RS20765 0.39 -0.9 800,531 + EX31_RS20765 0.39 -3.1 800,531 + EX31_RS20765 0.39 -0.9 800,531 + EX31_RS20765 0.39 -1.3 800,531 + EX31_RS20765 0.39 -1.5 800,531 + EX31_RS20765 0.39 +1.1 800,532 - EX31_RS20765 0.39 +1.1 800,532 - EX31_RS20765 0.39 +0.2 800,532 - EX31_RS20765 0.39 -1.2 800,532 - EX31_RS20765 0.39 +1.2 800,532 - EX31_RS20765 0.39 -1.3 800,532 - EX31_RS20765 0.39 +0.3 800,533 + EX31_RS20765 0.39 +0.7 800,533 + EX31_RS20765 0.39 -0.7 800,533 + EX31_RS20765 0.39 -1.2 800,533 + EX31_RS20765 0.39 -1.2 800,588 + EX31_RS20765 0.45 -0.5 800,631 - EX31_RS20765 0.49 +1.1 800,672 + EX31_RS20765 0.53 -1.1 800,812 - EX31_RS20765 0.68 +0.8 800,912 + EX31_RS20765 0.78 -1.1 800,912 + EX31_RS20765 0.78 -1.7 800,939 + EX31_RS20765 0.81 +0.1 800,940 - EX31_RS20765 0.81 -2.5 800,964 + EX31_RS20765 0.83 +2.1 800,967 + EX31_RS20765 0.84 -0.9 800,967 + EX31_RS20765 0.84 +0.1 800,967 + EX31_RS20765 0.84 -1.9 800,967 + EX31_RS20765 0.84 +1.8 800,967 + EX31_RS20765 0.84 +1.6 800,968 - EX31_RS20765 0.84 +0.1 800,969 + EX31_RS20765 0.84 +1.2 800,969 + EX31_RS20765 0.84 -0.9 800,970 - EX31_RS20765 0.84 -1.9 800,970 - EX31_RS20765 0.84 -0.5 800,970 - EX31_RS20765 0.84 +0.1 800,970 - EX31_RS20765 0.84 +0.8 800,970 - EX31_RS20765 0.84 -0.2 801,029 + +0.7 801,030 - +1.8 801,064 - +1.6 801,064 - -0.5 801,064 - +1.4 801,074 + +0.8 801,075 - +0.5 801,079 - +1.7 801,092 + +1.0 801,092 + +1.1 801,111 - +1.2 801,125 + +1.1 801,125 + +0.4 801,125 + +0.4 801,129 - +1.4 801,129 - +0.5 801,147 + +2.9 801,148 - -1.2 801,148 - -0.3 801,148 - -0.3 801,163 - -1.7 801,221 + -0.6 801,287 + +0.7 801,288 - +0.3 801,288 - -0.0 801,288 - -1.5 801,294 + +0.6 801,295 - -0.9 801,362 + EX31_RS20770 0.12 +0.9 801,363 - EX31_RS20770 0.12 +0.8 801,365 - EX31_RS20770 0.13 +1.5 801,387 - EX31_RS20770 0.14 -1.7 801,425 + EX31_RS20770 0.17 +1.1 801,425 + EX31_RS20770 0.17 -1.2 801,425 + EX31_RS20770 0.17 +1.0 801,426 - EX31_RS20770 0.17 -1.9 801,501 + EX31_RS20770 0.22 -0.2 801,502 - EX31_RS20770 0.22 -0.5 801,506 + EX31_RS20770 0.22 +1.0 801,506 + EX31_RS20770 0.22 -2.1 801,507 - EX31_RS20770 0.22 +0.8 801,507 - EX31_RS20770 0.22 -0.2 801,507 - EX31_RS20770 0.22 -0.6 801,551 + EX31_RS20770 0.25 +2.1 801,552 - EX31_RS20770 0.25 +0.3 801,587 + EX31_RS20770 0.27 -1.9 801,614 + EX31_RS20770 0.29 +0.4 801,638 + EX31_RS20770 0.31 +0.1 801,639 - EX31_RS20770 0.31 +0.8 801,791 + EX31_RS20770 0.41 -3.1 801,916 + EX31_RS20770 0.49 -0.9 801,968 + EX31_RS20770 0.53 -0.4 801,968 + EX31_RS20770 0.53 +0.9 801,968 + EX31_RS20770 0.53 +0.7 801,968 + EX31_RS20770 0.53 +0.3 801,968 + EX31_RS20770 0.53 -0.6 801,969 - EX31_RS20770 0.53 -1.6 801,969 - EX31_RS20770 0.53 -1.6 801,969 - EX31_RS20770 0.53 +1.5 801,969 - EX31_RS20770 0.53 -0.2 801,969 - EX31_RS20770 0.53 +0.1 801,992 + EX31_RS20770 0.55 +0.9 801,992 + EX31_RS20770 0.55 -1.7 802,014 - EX31_RS20770 0.56 +0.5 802,023 + EX31_RS20770 0.57 +0.9 802,023 + EX31_RS20770 0.57 -0.5 802,023 + EX31_RS20770 0.57 +0.5 802,023 + EX31_RS20770 0.57 -3.3 802,023 + EX31_RS20770 0.57 -0.9 802,023 + EX31_RS20770 0.57 -1.5 802,023 + EX31_RS20770 0.57 +1.4 802,023 + EX31_RS20770 0.57 -2.1 802,024 - EX31_RS20770 0.57 -0.2 802,024 - EX31_RS20770 0.57 +0.4 802,024 - EX31_RS20770 0.57 -0.9 802,024 - EX31_RS20770 0.57 -0.1 802,024 - EX31_RS20770 0.57 -0.3 802,024 - EX31_RS20770 0.57 -2.1 802,078 + EX31_RS20770 0.60 +0.5 802,078 + EX31_RS20770 0.60 -0.8 802,078 + EX31_RS20770 0.60 -2.1 802,078 + EX31_RS20770 0.60 +0.1 802,078 + EX31_RS20770 0.60 -0.3 802,078 + EX31_RS20770 0.60 -0.2 802,078 + EX31_RS20770 0.60 +0.1 802,078 + EX31_RS20770 0.60 -1.9 802,078 + EX31_RS20770 0.60 -2.2 802,078 + EX31_RS20770 0.60 -0.3 802,078 + EX31_RS20770 0.60 -3.2 802,079 - EX31_RS20770 0.60 -1.8 802,079 - EX31_RS20770 0.60 -0.1 802,234 - EX31_RS20770 0.71 -1.6 802,234 - EX31_RS20770 0.71 +0.5 802,268 + EX31_RS20770 0.73 -0.5 802,269 - EX31_RS20770 0.73 +0.9 802,269 - EX31_RS20770 0.73 -0.5 802,269 - EX31_RS20770 0.73 -1.2 802,269 - EX31_RS20770 0.73 +1.1 802,309 + EX31_RS20770 0.76 +1.5 802,309 + EX31_RS20770 0.76 +0.8 802,310 - EX31_RS20770 0.76 -1.2 802,370 + EX31_RS20770 0.80 -1.5 802,371 - EX31_RS20770 0.80 -1.6 802,371 - EX31_RS20770 0.80 +1.3 802,371 - EX31_RS20770 0.80 -1.5 802,627 + +0.7 802,627 + -1.8 802,704 + +1.1 802,705 - +1.1 802,705 - -1.0 802,705 - -0.4 802,835 + EX31_RS20775 0.13 +0.9 802,835 + EX31_RS20775 0.13 +0.5 802,836 - EX31_RS20775 0.13 -0.5 802,836 - EX31_RS20775 0.13 +2.1 802,864 + EX31_RS20775 0.15 +1.8 802,864 + EX31_RS20775 0.15 +0.8 802,864 + EX31_RS20775 0.15 +0.7 802,865 - EX31_RS20775 0.16 +0.9 802,920 + EX31_RS20775 0.21 -0.6 802,920 + EX31_RS20775 0.21 +1.7 802,921 - EX31_RS20775 0.21 -1.4 802,921 - EX31_RS20775 0.21 -0.2 802,933 + EX31_RS20775 0.22 +0.3 802,950 - EX31_RS20775 0.24 +1.0 803,181 + EX31_RS20775 0.46 -0.1 803,181 + EX31_RS20775 0.46 +0.2 803,181 + EX31_RS20775 0.46 -0.5 803,181 + EX31_RS20775 0.46 +0.7 803,181 + EX31_RS20775 0.46 +0.2 803,182 - EX31_RS20775 0.46 +1.1 803,182 - EX31_RS20775 0.46 -2.4 803,182 - EX31_RS20775 0.46 +1.7 803,182 - EX31_RS20775 0.46 -0.7 803,182 - EX31_RS20775 0.46 -1.5 803,182 - EX31_RS20775 0.46 -1.1 803,182 - EX31_RS20775 0.46 +0.4 803,182 - EX31_RS20775 0.46 +0.7 803,259 - EX31_RS20775 0.53 -1.7 803,259 - EX31_RS20775 0.53 -1.5 803,276 + EX31_RS20775 0.55 +0.9 803,289 + EX31_RS20775 0.56 -0.3 803,289 + EX31_RS20775 0.56 -2.1 803,290 - EX31_RS20775 0.56 +2.1 803,290 - EX31_RS20775 0.56 +1.1 803,290 - EX31_RS20775 0.56 -0.1 803,484 + EX31_RS20775 0.75 -1.7 803,507 - EX31_RS20775 0.77 +0.8 803,507 - EX31_RS20775 0.77 +1.1 803,521 + EX31_RS20775 0.78 -1.5 803,521 + EX31_RS20775 0.78 +0.8 803,521 + EX31_RS20775 0.78 +1.9 803,521 + EX31_RS20775 0.78 +0.7 803,521 + EX31_RS20775 0.78 +0.0 803,521 + EX31_RS20775 0.78 +0.1 803,521 + EX31_RS20775 0.78 +1.7 803,521 + EX31_RS20775 0.78 +1.1 803,522 - EX31_RS20775 0.78 +1.7 803,522 - EX31_RS20775 0.78 -0.4 803,522 - EX31_RS20775 0.78 -0.1 803,522 - EX31_RS20775 0.78 -0.8 803,522 - EX31_RS20775 0.78 +0.3 803,522 - EX31_RS20775 0.78 +0.0 803,522 - EX31_RS20775 0.78 -1.7 803,523 + EX31_RS20775 0.79 +1.0 803,523 + EX31_RS20775 0.79 +2.7 803,523 + EX31_RS20775 0.79 +1.2 803,523 + EX31_RS20775 0.79 -0.5 803,523 + EX31_RS20775 0.79 +0.0 803,523 + EX31_RS20775 0.79 +0.2 803,523 + EX31_RS20775 0.79 +1.8 803,524 - EX31_RS20775 0.79 +1.6 803,524 - EX31_RS20775 0.79 -0.4 803,616 + EX31_RS20775 0.87 +1.1 803,616 + EX31_RS20775 0.87 +1.9 803,617 - EX31_RS20775 0.88 +0.2
Or see this region's nucleotide sequence