Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS14615 and EX31_RS14620 overlap by 4 nucleotides EX31_RS14620 and EX31_RS14625 are separated by 13 nucleotides EX31_RS14625 and EX31_RS14630 are separated by 141 nucleotides
EX31_RS14615: EX31_RS14615 - ubiquinone biosynthesis regulatory protein kinase UbiB, at 14,718 to 16,349
_RS14615
EX31_RS14620: EX31_RS14620 - SCP2 domain-containing protein, at 16,346 to 16,954
_RS14620
EX31_RS14625: EX31_RS14625 - bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE, at 16,968 to 17,723
_RS14625
EX31_RS14630: EX31_RS14630 - DNA recombination protein RmuC, at 17,865 to 19,406
_RS14630
Position (kb)
16
17 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 16.373 kb on - strand at 16.489 kb on - strand, within EX31_RS14620 at 16.489 kb on - strand, within EX31_RS14620 at 16.579 kb on - strand, within EX31_RS14620 at 16.665 kb on - strand, within EX31_RS14620 at 16.713 kb on - strand, within EX31_RS14620 at 16.718 kb on - strand, within EX31_RS14620 at 16.718 kb on - strand, within EX31_RS14620 at 16.906 kb on - strand at 16.910 kb on - strand at 16.961 kb on - strand at 16.961 kb on - strand at 16.961 kb on - strand at 16.967 kb on - strand at 17.767 kb on - strand at 17.767 kb on - strand at 17.811 kb on + strand at 17.811 kb on + strand at 17.811 kb on + strand at 17.812 kb on - strand at 17.812 kb on - strand at 17.842 kb on + strand at 17.842 kb on + strand at 17.842 kb on + strand at 17.842 kb on + strand at 17.842 kb on + strand at 17.842 kb on + strand at 17.843 kb on - strand at 17.843 kb on - strand at 17.867 kb on - strand at 17.867 kb on - strand at 17.886 kb on + strand at 17.886 kb on + strand at 17.887 kb on - strand at 17.930 kb on + strand at 17.931 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 16,373 - -1.1 16,489 - EX31_RS14620 0.23 -1.1 16,489 - EX31_RS14620 0.23 -0.1 16,579 - EX31_RS14620 0.38 +0.5 16,665 - EX31_RS14620 0.52 -0.5 16,713 - EX31_RS14620 0.60 -0.9 16,718 - EX31_RS14620 0.61 -0.4 16,718 - EX31_RS14620 0.61 -0.1 16,906 - -3.1 16,910 - -1.1 16,961 - -0.5 16,961 - +0.8 16,961 - -0.5 16,967 - -0.2 17,767 - +0.5 17,767 - -0.4 17,811 + -0.2 17,811 + -0.5 17,811 + -0.6 17,812 - +1.3 17,812 - -2.0 17,842 + +0.6 17,842 + -0.8 17,842 + -1.5 17,842 + -3.0 17,842 + +1.2 17,842 + +0.9 17,843 - -0.7 17,843 - -0.5 17,867 - -0.2 17,867 - +0.3 17,886 + -1.4 17,886 + -2.0 17,887 - -0.3 17,930 + -1.5 17,931 - +0.2
Or see this region's nucleotide sequence