Strain Fitness in Rahnella sp. WP5 around EX31_RS11855

Experiment: D,L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate (C)
30,991	-		EX31_RS11850	0.46	-0.6
31,001	-		EX31_RS11850	0.47	-1.5
31,014	+		EX31_RS11850	0.48	-1.5
31,014	+		EX31_RS11850	0.48	+0.3
31,014	+		EX31_RS11850	0.48	+0.1
31,014	+		EX31_RS11850	0.48	+0.3
31,015	-		EX31_RS11850	0.48	-0.6
31,015	-		EX31_RS11850	0.48	+1.2
31,083	-		EX31_RS11850	0.53	-3.1
31,132	+		EX31_RS11850	0.56	+0.0
31,132	+		EX31_RS11850	0.56	-1.2
31,133	-		EX31_RS11850	0.56	+0.1
31,133	-		EX31_RS11850	0.56	+0.5
31,133	-		EX31_RS11850	0.56	-1.2
31,138	+		EX31_RS11850	0.57	-0.7
31,138	+		EX31_RS11850	0.57	+0.0
31,138	+		EX31_RS11850	0.57	+0.7
31,138	+		EX31_RS11850	0.57	-0.9
31,138	+		EX31_RS11850	0.57	-0.3
31,139	-		EX31_RS11850	0.57	-2.3
31,232	+		EX31_RS11850	0.64	-0.2
31,260	+		EX31_RS11850	0.66	+0.3
31,260	+		EX31_RS11850	0.66	-1.1
31,261	-		EX31_RS11850	0.66	+0.2
31,261	-		EX31_RS11850	0.66	+0.7
31,423	+		EX31_RS11850	0.78	-1.1
31,453	-		EX31_RS11850	0.80	-0.8
31,469	+		EX31_RS11850	0.81	-0.8
31,469	+		EX31_RS11850	0.81	-0.6
31,469	+		EX31_RS11850	0.81	+0.4
31,470	-		EX31_RS11850	0.81	+0.8
31,470	-		EX31_RS11850	0.81	+0.2
31,470	-		EX31_RS11850	0.81	-2.3
31,470	-		EX31_RS11850	0.81	+1.7
31,470	-		EX31_RS11850	0.81	+2.4
31,497	+		EX31_RS11850	0.83	+0.1
31,497	+		EX31_RS11850	0.83	+1.3
31,497	+		EX31_RS11850	0.83	+0.7
31,498	-		EX31_RS11850	0.83	-0.2
31,498	-		EX31_RS11850	0.83	+0.2
31,517	+		EX31_RS11850	0.85	+0.1
31,541	+		EX31_RS11850	0.86	-0.3
31,640	-				+0.6
31,781	+				-0.0
31,781	+				+1.0
31,782	-				-0.2
31,786	+				+0.8
31,786	+				+0.2
31,792	+				+0.9
31,792	+				-0.1
31,793	-				+1.4
31,793	-				-0.9
31,793	-				+1.1
31,795	+				-0.9
31,795	+				+0.8
31,795	+				-0.2
31,796	-				-0.4
31,825	+				+0.6
31,826	-				-1.6
31,826	-				-0.1
31,839	+				-1.0
31,843	-				-1.6
31,843	-				+0.4
31,890	-				+0.2
31,901	+				+1.1
31,901	+				+0.4
31,901	+				+0.6
31,911	+				+0.9
31,911	+				-0.1
31,912	-				-0.8
31,912	-				+0.4
31,912	-				-1.1
31,912	-				-1.2
31,917	-				+0.1
31,917	-				+0.2
31,922	+				-0.8
31,922	+				+0.2
31,922	+				-0.6
31,922	+				+0.9
31,922	+				+0.8
31,923	-				+0.7
32,018	+		EX31_RS11855	0.48	+1.4
32,018	+		EX31_RS11855	0.48	+0.5
32,019	-		EX31_RS11855	0.49	-0.6
32,019	-		EX31_RS11855	0.49	+1.4
32,115	+				+1.2
32,115	+				+1.2
32,116	-				-0.5
32,116	-				-0.1
32,169	+				+1.4
32,169	+				+0.4
32,170	-				+0.5
32,170	-				+1.5
32,204	+				+0.1
32,214	+				-1.0
32,214	+				-0.0
32,215	-				-0.2
32,215	-				+0.9
32,215	-				+0.2
32,215	-				-1.2
32,232	+				-2.0
32,250	+				-0.5
32,250	+				-1.1
32,250	+				+2.4
32,251	-				+0.9
32,251	-				+0.1
32,251	-				+0.9
32,251	-				-0.8
32,251	-				+0.4
32,251	-				+0.2
32,271	+				-0.6
32,271	+				-0.5
32,272	-				-0.3
32,305	+				+0.3
32,305	+				-0.3
32,305	+				+0.1
32,305	+				+0.8
32,305	+				+1.2
32,305	+				-0.2
32,305	+				-1.0
32,306	-				-0.4
32,306	-				+0.7
32,306	-				-0.6
32,306	-				-0.3
32,306	-				+1.4
32,306	-				+1.4
32,348	+		EX31_RS11860	0.12	+0.8
32,348	+		EX31_RS11860	0.12	+0.6
32,349	-		EX31_RS11860	0.13	+0.4
32,352	-		EX31_RS11860	0.13	-2.2
32,352	-		EX31_RS11860	0.13	+1.0
32,352	-		EX31_RS11860	0.13	+0.8
32,352	-		EX31_RS11860	0.13	-0.5
32,352	-		EX31_RS11860	0.13	-0.3
32,352	-		EX31_RS11860	0.13	-1.0
32,369	+		EX31_RS11860	0.16	-1.0
32,369	+		EX31_RS11860	0.16	-0.0
32,370	-		EX31_RS11860	0.17	-0.2
32,370	-		EX31_RS11860	0.17	-1.0
32,370	-		EX31_RS11860	0.17	+1.6
32,370	-		EX31_RS11860	0.17	+0.9
32,417	+		EX31_RS11860	0.26	+1.8
32,417	+		EX31_RS11860	0.26	+1.9
32,417	+		EX31_RS11860	0.26	+0.5
32,418	-		EX31_RS11860	0.26	-0.2
32,418	-		EX31_RS11860	0.26	-2.1
32,418	-		EX31_RS11860	0.26	-1.5
32,418	-		EX31_RS11860	0.26	-0.7
32,471	+		EX31_RS11860	0.36	+1.4
32,491	+		EX31_RS11860	0.40	+0.7
32,491	+		EX31_RS11860	0.40	+2.7
32,491	+		EX31_RS11860	0.40	+2.7
32,492	-		EX31_RS11860	0.41	-1.0
32,492	-		EX31_RS11860	0.41	+0.6
32,506	+		EX31_RS11860	0.43	+2.8
32,541	+		EX31_RS11860	0.50	+2.2
32,541	+		EX31_RS11860	0.50	+2.5
32,541	+		EX31_RS11860	0.50	+1.4
32,541	+		EX31_RS11860	0.50	-0.1
32,542	-		EX31_RS11860	0.50	+2.0
32,542	-		EX31_RS11860	0.50	+1.1
32,542	-		EX31_RS11860	0.50	+0.8
32,542	-		EX31_RS11860	0.50	+1.2
32,569	+		EX31_RS11860	0.56	+0.5
32,569	+		EX31_RS11860	0.56	-0.1
32,569	+		EX31_RS11860	0.56	+2.2
32,570	-		EX31_RS11860	0.56	+0.4
32,570	-		EX31_RS11860	0.56	+3.4
32,570	-		EX31_RS11860	0.56	+0.6
32,570	-		EX31_RS11860	0.56	+2.7
32,570	-		EX31_RS11860	0.56	-1.6
32,570	-		EX31_RS11860	0.56	-0.5
32,646	-		EX31_RS11860	0.71	-1.5
32,703	-		EX31_RS11860	0.82	+3.2
32,794	+				+2.6
32,794	+				+1.5
32,795	-				-2.1
32,857	+				-0.6
32,858	-				-0.5
32,884	+				+0.8
32,884	+				-1.3
32,885	-				-0.1
32,961	+				+2.4
32,963	+				-0.9
32,963	+				-1.6
32,963	+				+0.4
32,963	+				-2.7
32,964	-				+0.9
32,964	-				+0.4
32,964	-				+1.0
32,974	+				+0.7
32,974	+				-1.1
32,974	+				-0.1
32,975	-				+0.9
32,975	-				+0.3
33,056	+				-2.5
33,056	+				+0.1
33,056	+				-0.8
33,056	+				-0.6
33,056	+				+0.2
33,056	+				+0.4
33,056	+				-0.2
33,056	+				+0.7
33,056	+				-1.1
33,056	+				-0.2
33,056	+				-0.6
33,056	+				+2.4
33,057	-				+0.4
33,057	-				-3.5
33,057	-				+0.4
33,057	-				-0.8
33,057	-				+1.8