Strain Fitness in Rahnella sp. WP5 around EX31_RS11040

Experiment: D,L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate (C)
138,173	-		EX31_RS11030	0.86	+0.4
138,317	-				-2.3
138,359	-				-1.9
138,426	-				-1.1
138,474	+		EX31_RS11035	0.11	+0.9
138,475	-		EX31_RS11035	0.12	-1.6
138,475	-		EX31_RS11035	0.12	-0.1
138,475	-		EX31_RS11035	0.12	-0.0
138,498	+		EX31_RS11035	0.15	-1.1
138,499	-		EX31_RS11035	0.15	+0.5
138,499	-		EX31_RS11035	0.15	+0.1
138,499	-		EX31_RS11035	0.15	-0.2
138,516	+		EX31_RS11035	0.18	-0.1
138,516	+		EX31_RS11035	0.18	-0.7
138,517	-		EX31_RS11035	0.18	+0.4
138,517	-		EX31_RS11035	0.18	+0.1
138,517	-		EX31_RS11035	0.18	-0.6
138,517	-		EX31_RS11035	0.18	+0.7
138,517	-		EX31_RS11035	0.18	-0.6
138,517	-		EX31_RS11035	0.18	+1.1
138,517	-		EX31_RS11035	0.18	-1.1
138,517	-		EX31_RS11035	0.18	+1.3
138,519	-		EX31_RS11035	0.19	+1.1
138,519	-		EX31_RS11035	0.19	-0.6
138,582	-		EX31_RS11035	0.29	+1.2
138,582	-		EX31_RS11035	0.29	+0.9
138,582	-		EX31_RS11035	0.29	+1.4
138,644	-		EX31_RS11035	0.39	+1.2
138,672	+		EX31_RS11035	0.44	-0.7
138,728	+		EX31_RS11035	0.53	+0.2
138,729	-		EX31_RS11035	0.53	-0.3
138,862	-		EX31_RS11035	0.74	-2.5
138,998	+				-0.4
138,998	+				+1.3
138,998	+				+1.4
138,999	-				-0.7
138,999	-				-0.3
138,999	-				+0.3
138,999	-				+0.9
138,999	-				+0.7
138,999	-				-0.9
138,999	-				+1.1
138,999	-				-0.1
138,999	-				+0.4
138,999	-				+1.2
138,999	-				-1.3
138,999	-				+0.9
138,999	-				+0.7
138,999	-				-1.5
138,999	-				+2.1
138,999	-				-0.6
138,999	-				+0.1
139,005	-				+1.4
139,005	-				+0.9
139,005	-				+0.2
139,005	-				-0.4
139,030	-				+1.1
139,030	-				+1.4
139,122	+				-0.7
139,180	+				-0.6
139,214	-				+1.8
139,301	+		EX31_RS11040	0.13	+0.9
139,310	-		EX31_RS11040	0.14	+1.5
139,310	-		EX31_RS11040	0.14	+0.9
139,310	-		EX31_RS11040	0.14	+0.1
139,500	+		EX31_RS11040	0.27	+0.9
139,501	-		EX31_RS11040	0.27	+1.2
139,515	+		EX31_RS11040	0.28	-0.7
139,515	+		EX31_RS11040	0.28	-0.9
139,515	+		EX31_RS11040	0.28	+1.4
139,515	+		EX31_RS11040	0.28	-0.1
139,515	+		EX31_RS11040	0.28	-0.2
139,516	-		EX31_RS11040	0.28	-1.2
139,516	-		EX31_RS11040	0.28	+1.3
139,516	-		EX31_RS11040	0.28	+2.4
139,516	-		EX31_RS11040	0.28	+1.2
139,516	-		EX31_RS11040	0.28	-2.1
139,516	-		EX31_RS11040	0.28	-0.7
139,519	+		EX31_RS11040	0.28	-0.3
139,519	+		EX31_RS11040	0.28	+1.9
139,519	+		EX31_RS11040	0.28	-0.4
139,520	-		EX31_RS11040	0.28	+0.1
139,520	-		EX31_RS11040	0.28	-1.3
139,556	+		EX31_RS11040	0.31	-0.1
139,556	+		EX31_RS11040	0.31	-1.7
139,666	+		EX31_RS11040	0.38	-1.1
139,666	+		EX31_RS11040	0.38	-1.7
139,666	+		EX31_RS11040	0.38	+0.9
139,666	+		EX31_RS11040	0.38	+2.2
139,666	+		EX31_RS11040	0.38	+1.3
139,666	+		EX31_RS11040	0.38	+1.1
139,666	+		EX31_RS11040	0.38	+0.9
139,666	+		EX31_RS11040	0.38	-1.9
139,666	+		EX31_RS11040	0.38	-0.0
139,666	+		EX31_RS11040	0.38	+0.9
139,666	+		EX31_RS11040	0.38	-0.4
139,666	+		EX31_RS11040	0.38	-2.1
139,666	+		EX31_RS11040	0.38	+0.1
139,666	+		EX31_RS11040	0.38	+1.4
139,666	+		EX31_RS11040	0.38	-1.2
139,666	+		EX31_RS11040	0.38	+0.7
139,666	+		EX31_RS11040	0.38	+0.9
139,666	+		EX31_RS11040	0.38	+1.9
139,666	+		EX31_RS11040	0.38	-0.7
139,667	-		EX31_RS11040	0.38	-2.5
139,667	-		EX31_RS11040	0.38	+2.1
139,667	-		EX31_RS11040	0.38	+1.2
139,667	-		EX31_RS11040	0.38	+1.7
139,667	-		EX31_RS11040	0.38	-1.1
139,667	-		EX31_RS11040	0.38	+0.9
139,667	-		EX31_RS11040	0.38	+1.4
139,667	-		EX31_RS11040	0.38	+1.1
139,667	-		EX31_RS11040	0.38	-1.9
139,668	+		EX31_RS11040	0.39	-0.7
139,668	+		EX31_RS11040	0.39	+2.3
139,669	-		EX31_RS11040	0.39	+1.3
139,686	-		EX31_RS11040	0.40	-1.9
139,722	+		EX31_RS11040	0.42	-0.4
139,748	+		EX31_RS11040	0.44	+1.2
139,749	-		EX31_RS11040	0.44	+0.9
139,762	-		EX31_RS11040	0.45	-2.3
139,874	+		EX31_RS11040	0.53	+0.4
139,874	+		EX31_RS11040	0.53	+1.1
139,874	+		EX31_RS11040	0.53	+2.4
139,874	+		EX31_RS11040	0.53	-1.5
139,874	+		EX31_RS11040	0.53	-1.1
139,875	-		EX31_RS11040	0.53	-1.5
139,875	-		EX31_RS11040	0.53	+0.9
139,875	-		EX31_RS11040	0.53	+1.1
139,875	-		EX31_RS11040	0.53	+2.4
139,875	-		EX31_RS11040	0.53	-0.8
139,875	-		EX31_RS11040	0.53	-1.8
139,875	-		EX31_RS11040	0.53	+0.1
139,919	+		EX31_RS11040	0.56	-0.6
139,920	-		EX31_RS11040	0.56	+1.5
139,920	-		EX31_RS11040	0.56	-1.1
140,005	-		EX31_RS11040	0.62	+1.4
140,044	-		EX31_RS11040	0.64	+0.3
140,065	+		EX31_RS11040	0.66	+1.3
140,065	+		EX31_RS11040	0.66	-1.5
140,066	-		EX31_RS11040	0.66	+1.5
140,213	+		EX31_RS11040	0.76	+1.5
140,214	-		EX31_RS11040	0.76	+1.4
140,267	+		EX31_RS11040	0.80	+0.9
140,268	-		EX31_RS11040	0.80	+3.5
140,505	+				+0.9
140,505	+				+1.9
140,505	+				+0.7
140,557	+				+1.1
140,558	-				+0.9
140,558	-				+1.4
140,558	-				-2.5
140,579	+				-1.2
140,661	+				-0.9
140,661	+				+1.3
140,661	+				+0.1
140,661	+				-1.7
140,661	+				-0.7
140,661	+				-0.3
140,662	-				-0.1
140,662	-				-0.6
140,662	-				+3.4
140,662	-				-0.9
140,662	-				-2.8
140,662	-				+0.9
140,662	-				-0.6
140,662	-				-1.7
140,662	-				-0.1
140,682	+				-1.1
140,802	-		EX31_RS11045	0.13	+0.2
140,828	-		EX31_RS11045	0.28	-1.5
140,919	-		EX31_RS11045	0.84	+0.0
141,055	+		EX31_RS11050	0.13	-0.4
141,056	-		EX31_RS11050	0.13	+0.9
141,178	+		EX31_RS11050	0.28	-0.1
141,209	+		EX31_RS11050	0.32	+1.3
141,235	+		EX31_RS11050	0.35	-1.7
141,235	+		EX31_RS11050	0.35	+0.7
141,236	-		EX31_RS11050	0.35	+0.9
141,320	+		EX31_RS11050	0.46	-1.5
141,331	+		EX31_RS11050	0.47	-1.1
141,332	-		EX31_RS11050	0.47	-0.6
141,344	-		EX31_RS11050	0.49	-0.7
141,344	-		EX31_RS11050	0.49	+1.3
141,410	+		EX31_RS11050	0.57	-1.5
141,410	+		EX31_RS11050	0.57	+0.6
141,410	+		EX31_RS11050	0.57	+0.1
141,410	+		EX31_RS11050	0.57	+0.9
141,410	+		EX31_RS11050	0.57	+0.6
141,411	-		EX31_RS11050	0.57	+0.3
141,411	-		EX31_RS11050	0.57	+0.9
141,411	-		EX31_RS11050	0.57	+0.1
141,411	-		EX31_RS11050	0.57	+1.9
141,411	-		EX31_RS11050	0.57	+0.9
141,413	-		EX31_RS11050	0.57	+0.6