Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS09540 and EX31_RS09545 overlap by 4 nucleotides EX31_RS09545 and EX31_RS09550 overlap by 8 nucleotides EX31_RS09550 and EX31_RS09555 overlap by 1 nucleotides
EX31_RS09540: EX31_RS09540 - flagellar basal body M-ring protein FliF, at 112,081 to 113,790
_RS09540
EX31_RS09545: EX31_RS09545 - flagellar motor switch protein FliG, at 113,787 to 114,779
_RS09545
EX31_RS09550: EX31_RS09550 - flagellar assembly protein FliH, at 114,772 to 115,557
_RS09550
EX31_RS09555: EX31_RS09555 - flagellum-specific ATP synthase FliI, at 115,557 to 116,921
_RS09555
Position (kb) 114
115
116 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 113.775 kb on + strand at 113.793 kb on - strand at 113.980 kb on - strand, within EX31_RS09545 at 113.999 kb on + strand, within EX31_RS09545 at 114.674 kb on + strand, within EX31_RS09545 at 114.674 kb on + strand, within EX31_RS09545 at 114.674 kb on + strand, within EX31_RS09545 at 114.674 kb on + strand, within EX31_RS09545 at 114.675 kb on - strand, within EX31_RS09545 at 114.675 kb on - strand, within EX31_RS09545 at 114.771 kb on + strand at 114.772 kb on - strand at 114.772 kb on - strand at 114.786 kb on + strand at 114.786 kb on + strand at 114.790 kb on - strand at 114.790 kb on - strand at 114.987 kb on - strand, within EX31_RS09550 at 115.170 kb on + strand, within EX31_RS09550 at 115.171 kb on - strand, within EX31_RS09550 at 115.320 kb on + strand, within EX31_RS09550 at 115.320 kb on + strand, within EX31_RS09550 at 115.694 kb on - strand, within EX31_RS09555 at 115.839 kb on + strand, within EX31_RS09555 at 115.839 kb on + strand, within EX31_RS09555 at 115.839 kb on + strand, within EX31_RS09555 at 115.839 kb on + strand, within EX31_RS09555 at 115.915 kb on + strand, within EX31_RS09555 at 115.915 kb on + strand, within EX31_RS09555 at 115.915 kb on + strand, within EX31_RS09555 at 115.915 kb on + strand, within EX31_RS09555 at 115.915 kb on + strand, within EX31_RS09555 at 116.287 kb on + strand, within EX31_RS09555 at 116.287 kb on + strand, within EX31_RS09555 at 116.287 kb on + strand, within EX31_RS09555 at 116.287 kb on + strand, within EX31_RS09555 at 116.288 kb on - strand, within EX31_RS09555 at 116.288 kb on - strand, within EX31_RS09555 at 116.291 kb on + strand, within EX31_RS09555 at 116.291 kb on + strand, within EX31_RS09555 at 116.291 kb on + strand, within EX31_RS09555 at 116.292 kb on - strand, within EX31_RS09555 at 116.292 kb on - strand, within EX31_RS09555 at 116.353 kb on + strand, within EX31_RS09555 at 116.443 kb on - strand, within EX31_RS09555 at 116.530 kb on - strand, within EX31_RS09555 at 116.530 kb on - strand, within EX31_RS09555 at 116.536 kb on + strand, within EX31_RS09555 at 116.536 kb on + strand, within EX31_RS09555 at 116.537 kb on - strand, within EX31_RS09555
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 113,775 + +1.0 113,793 - +2.3 113,980 - EX31_RS09545 0.19 -1.3 113,999 + EX31_RS09545 0.21 -1.3 114,674 + EX31_RS09545 0.89 +2.3 114,674 + EX31_RS09545 0.89 +0.9 114,674 + EX31_RS09545 0.89 +1.0 114,674 + EX31_RS09545 0.89 +2.3 114,675 - EX31_RS09545 0.89 +0.7 114,675 - EX31_RS09545 0.89 +0.3 114,771 + -0.6 114,772 - +1.7 114,772 - -0.3 114,786 + +0.7 114,786 + +0.0 114,790 - +1.8 114,790 - +0.7 114,987 - EX31_RS09550 0.27 -0.9 115,170 + EX31_RS09550 0.51 -0.9 115,171 - EX31_RS09550 0.51 -1.9 115,320 + EX31_RS09550 0.70 +0.1 115,320 + EX31_RS09550 0.70 -0.1 115,694 - EX31_RS09555 0.10 +2.3 115,839 + EX31_RS09555 0.21 +1.0 115,839 + EX31_RS09555 0.21 -1.6 115,839 + EX31_RS09555 0.21 +1.0 115,839 + EX31_RS09555 0.21 +1.6 115,915 + EX31_RS09555 0.26 -0.3 115,915 + EX31_RS09555 0.26 +0.7 115,915 + EX31_RS09555 0.26 +0.7 115,915 + EX31_RS09555 0.26 +0.9 115,915 + EX31_RS09555 0.26 -0.0 116,287 + EX31_RS09555 0.53 +1.3 116,287 + EX31_RS09555 0.53 -0.8 116,287 + EX31_RS09555 0.53 -0.3 116,287 + EX31_RS09555 0.53 +0.8 116,288 - EX31_RS09555 0.54 -1.1 116,288 - EX31_RS09555 0.54 +0.7 116,291 + EX31_RS09555 0.54 -0.8 116,291 + EX31_RS09555 0.54 -3.1 116,291 + EX31_RS09555 0.54 -2.8 116,292 - EX31_RS09555 0.54 -0.9 116,292 - EX31_RS09555 0.54 -0.9 116,353 + EX31_RS09555 0.58 +0.9 116,443 - EX31_RS09555 0.65 -1.6 116,530 - EX31_RS09555 0.71 +1.5 116,530 - EX31_RS09555 0.71 +0.3 116,536 + EX31_RS09555 0.72 +0.5 116,536 + EX31_RS09555 0.72 -2.1 116,537 - EX31_RS09555 0.72 +0.7
Or see this region's nucleotide sequence